mRNA_E-fasciculatus_F_contig1209.1630.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1209.1630.1 vs. uniprot
Match: D8LQ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ22_ECTSI) HSP 1 Score: 912 bits (2356), Expect = 0.000e+0 Identity = 548/673 (81.43%), Postives = 555/673 (82.47%), Query Frame = 1
Query: 1 MAVMMAKCERLRQAYSDYKHLSTDNLSFVAGLRGRPVPAPGADPGRRKVRRRPKPDDVPKGEDDEKVEXXDDSSLESQGAKQACPSRSCAPRADKLEAMMEKRVAAQTARQKAQSRLGSAREKSQEAETKLEEAKAELVRMTKAIAEGDERTEALQDTLRNEGSINKAFAEELDMLLVEAMNLRREFVVDTLPPRPTTVIVPVDEGEEDDDAPRYQEDGRSLESPVIAPGQQLLARDGGXXXXXXXXXXXA-HDGSREWVHSGRHAHTGIFVRPPRPKSRGXXXXXXRNPSSPQESSSDQQRNYIGDSSSGGSRSGLPGAAAAVAVA-------DAATGRDGGXXXXXXXXXXXXXYGGGSKSRSEGEDAWSCCGKPVLSAGRGCEPREPLATPEDLLLDTIDPRSRLGQPLDFRDFLPQIAWLGLSPDAERPLPGSPGDGTLRPHTAPERLMDAAGQWSPQGWAGGSANREYERRASRSRNGGLVGGVWASGGRRRREPG----VAHPPSPDSGVNAWWKNKTPHQWGG--------GGSADGRGSRTGAGEAPPVPKRHVFLRRSHPTATTATYAASRSGTIHNNGDARTGXXXXXXXXXXXXXXXXXXXXXAAGVDELWPRTQILGMNGGRLPRRVRQVPIDRPLTAPCGKVGRRRVRTRGGNKGAANRP 1959
MAV+MAKCERLRQAYSDYKHLSTDNLSFVAGLRGRPVPAPGAD GR KVRRRPKPDDVPK ED XX DSSLESQGAKQACPSRSCAPR DKLEAM EKRVAAQTARQKAQSRLGSARE+SQEAETKLEEAKAELVRMTKAIAEGDERTEALQDTLRNEGSINKA AEELDMLLVEAMNLRREFVVDTLPPRPTTVIVPVDEGEED+DAP YQEDGRSLESPVIAPGQQLLARDGG XXXXXXXX HDGSREW+HSGR AHTGIFVRPPRPKSRGXXXXXX DAATGRDGG YGGGSK RSEGEDAWSCCGKPVLSAGRGCEPREPLATPEDLLLDTIDPRSRLGQPLDFRDFLPQIAWLGLSPD RPLPGSPGDGTLRPHTAPERL DAAGQWSPQGWAGG ANREY+RRASRSRNGGLVGGVWASGGRRRR PG VAHPPS DSGVN WWKNKTPHQ GG SRT AGEAP +PKRH FLRRSHPTATTATYA+SRSGT NNGDART XXXXXXXXXXXXXXXXXXXXAAGVDE WPRTQILGMNGGRLP RVRQVPIDRPLTAPCGKVGRRRVRTRGGNKG ANRP
Sbjct: 1 MAVLMAKCERLRQAYSDYKHLSTDNLSFVAGLRGRPVPAPGADLGRCKVRRRPKPDDVPKSEDXXXXXXXXDSSLESQGAKQACPSRSCAPRVDKLEAMTEKRVAAQTARQKAQSRLGSARERSQEAETKLEEAKAELVRMTKAIAEGDERTEALQDTLRNEGSINKAVAEELDMLLVEAMNLRREFVVDTLPPRPTTVIVPVDEGEEDNDAPSYQEDGRSLESPVIAPGQQLLARDGGGKGXXXXXXXXXPHDGSREWIHSGRLAHTGIFVRPPRPKSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAATGRDGGEGVGVEAEAAAGDYGGGSKGRSEGEDAWSCCGKPVLSAGRGCEPREPLATPEDLLLDTIDPRSRLGQPLDFRDFLPQIAWLGLSPDPVRPLPGSPGDGTLRPHTAPERLTDAAGQWSPQGWAGGDANREYDRRASRSRNGGLVGGVWASGGRRRRGPGGGLGVAHPPSLDSGVNTWWKNKTPHQRGGRXXXXXXXXXXXXXXXSRTEAGEAPLLPKRHAFLRRSHPTATTATYASSRSGTTRNNGDART--XXXXXXXXXXXXXXXXXXXXAAGVDEFWPRTQILGMNGGRLPTRVRQVPIDRPLTAPCGKVGRRRVRTRGGNKGGANRP 671 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1209.1630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1209.1630.1 >prot_E-fasciculatus_F_contig1209.1630.1 ID=prot_E-fasciculatus_F_contig1209.1630.1|Name=mRNA_E-fasciculatus_F_contig1209.1630.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=654bp MAVMMAKCERLRQAYSDYKHLSTDNLSFVAGLRGRPVPAPGADPGRRKVRback to top mRNA from alignment at E-fasciculatus_F_contig1209:4597..11150- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1209.1630.1 ID=mRNA_E-fasciculatus_F_contig1209.1630.1|Name=mRNA_E-fasciculatus_F_contig1209.1630.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6554bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1209:4597..11150- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1209:4597..11150- >mRNA_E-fasciculatus_F_contig1209.1630.1 ID=mRNA_E-fasciculatus_F_contig1209.1630.1|Name=mRNA_E-fasciculatus_F_contig1209.1630.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3924bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1209:4597..11150- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |