mRNA_E-fasciculatus_F_contig1208.1626.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1208.1626.1 vs. uniprot
Match: D7G777_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G777_ECTSI) HSP 1 Score: 326 bits (835), Expect = 4.600e-111 Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 2
Query: 221 MKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPGELSPEALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASEFTAADASAFPFLQRVHGEFGFPSECHRLEAWYASASSRPGVRKTIKQDFWWWW 694
MKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPGELSPEALRWRSIVNDRLKSAGKRAVFSGGSETDR SLNAVLQDLEACLS+GPERASEFTAADASAFPFLQRVHGEFGFPSEC RLEAWYASASSRPGVRKTIKQDFWWWW
Sbjct: 1 MKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPGELSPEALRWRSIVNDRLKSAGKRAVFSGGSETDRNSLNAVLQDLEACLSNGPERASEFTAADASAFPFLQRVHGEFGFPSECKRLEAWYASASSRPGVRKTIKQDFWWWW 158
BLAST of mRNA_E-fasciculatus_F_contig1208.1626.1 vs. uniprot
Match: A0A835ZAS3_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS3_9STRA) HSP 1 Score: 170 bits (431), Expect = 3.900e-49 Identity = 99/187 (52.94%), Postives = 116/187 (62.03%), Query Frame = 2
Query: 146 FVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVV-DGKPIVGSEETVDFLM---------PGELSPEALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSD-GPERASE-FTAADASAFPFLQRVHGEFGFPSECHRLEAWYASASSRPGVRKTI 670
F+TN+ CPYAQR WIALEES T YEM EVSLYG+GGKP+WF LNPKGEVPVLV DG I SE +D L P + A R++VN RLK AGKRAV S L A L++++A L+ GP + F AADASAFPFL RV EFGFP LEAW + +R GVR T+
Sbjct: 12 FITNKMCPYAQRVWIALEESGTPYEMAEVSLYGAGGKPAWFTALNPKGEVPVLVTADGAVIADSEAILDHLARPNSPLAPPPPCRAAHAAALRALVNARLKPAGKRAVLRP-SPAATAELMAALREIDAALATPGPYACGDAFCAADASAFPFLWRVRKEFGFPDGARALEAWADACEARAGVRATL 197
BLAST of mRNA_E-fasciculatus_F_contig1208.1626.1 vs. uniprot
Match: A0A6V1LE72_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LE72_HETAK) HSP 1 Score: 164 bits (416), Expect = 3.180e-46 Identity = 83/189 (43.92%), Postives = 115/189 (60.85%), Query Frame = 2
Query: 140 VQFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDF--------LMPGELSPEALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASEFTAADASAFPFLQRVHGEFGFPSECHRLEAWYASASSRPGVRKTIKQDF 682
++FVTN+ CP+AQRTWIAL ++ +EM E++LYGSGGKP WF+ LNP+GEVPVL + G +VGSE T+D L P L E WR N++L GKRAV SGG R +L ++L++ +A ++ + T AD S FP +QRV EFGFP +L W+ S + P V +T + +
Sbjct: 69 IRFVTNKMCPFAQRTWIALLQAGMEFEMVEINLYGSGGKPGWFLRLNPRGEVPVLDLGGGAVVGSEATLDHVAAAAAPELRPPGLEQEIKEWRRRTNEQLLPIGKRAVQSGG----REALTSLLEEFDASVTGPFLTGEQVTVADISMFPMMQRVESEFGFPQGSEKLRTWFDSMMALPAVSETCQASW 253
BLAST of mRNA_E-fasciculatus_F_contig1208.1626.1 vs. uniprot
Match: A0A7S1A063_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A063_NOCSC) HSP 1 Score: 151 bits (382), Expect = 8.770e-42 Identity = 78/191 (40.84%), Postives = 113/191 (59.16%), Query Frame = 2
Query: 140 VQFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPGE---LSPEA---LRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGP---ERASEFTAADASAFPFLQRVHGEFGFPSE-CHRLEAWYASASSRPGVRKTIKQDF 682
++ VTN CP+AQ+ W+ALEES Y +E+SLYG GKP WF+ LNP+G+VPVLVVDG ++ SE +D++ P+A +WR + R+ GK V GGS+ ++ L+A L++LE L +G F+ ADA+A PF+QR+ EF P + L AW+ R GV KT++Q +
Sbjct: 12 LELVTNAMCPFAQKAWVALEESKLPYTSREISLYGPNGKPPWFLRLNPRGQVPVLVVDGNAVIDSESILDWIATEAQHMAPPDAHLGAQWRRCIGQRVAPGGKALVLGGGSQ-EKAILHAALRELEEILQEGRGAYAAGGSFSVADAAAVPFMQRLCEEFDLPGDDTPLLRAWWERVKRRDGVAKTLQQSW 201
BLAST of mRNA_E-fasciculatus_F_contig1208.1626.1 vs. uniprot
Match: A0A7S1R7Y9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R7Y9_ALECA) HSP 1 Score: 143 bits (360), Expect = 4.520e-38 Identity = 78/190 (41.05%), Postives = 112/190 (58.95%), Query Frame = 2
Query: 143 QFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGK-PIVGSEETVDFLMPG--ELSPE----ALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACL--SDGPERASE-FTAADASAFPFLQRVHGEFGFPSECHRLEAWYASASSRPGVRKTIKQDF 682
+ VTN+ CP+AQ+ W+ALEES + + E+SLYG+GGKP WFM LNPKGE+PVL+ G +V SE+ +D++ E+SPE +R ++ R+ AGK V GG L+ L DL L S G A + F+ ADA+A PF+QR+ +G P E L W+ +RPGV T+++ +
Sbjct: 48 ELVTNRMCPFAQKAWVALEESGVPFSLTEISLYGAGGKPEWFMKLNPKGEIPVLIKSGGGAVVDSEKILDWVAKEVPEMSPEDAAAGTAFRRCISGRVAPAGKSRVIRGGGGAG-DDLDKALGDLNDLLEASPGSYAAGDCFSVADAAAVPFVQRLDERYGLPEEAAALRRWWELVRARPGVAATLQRSW 236
BLAST of mRNA_E-fasciculatus_F_contig1208.1626.1 vs. uniprot
Match: A0A0G4FU02_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FU02_VITBC) HSP 1 Score: 134 bits (336), Expect = 4.240e-35 Identity = 76/183 (41.53%), Postives = 104/183 (56.83%), Query Frame = 2
Query: 164 CPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPGELSPEAL--------RWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERA-----SEFTAADASAFPFLQRVHGEFGF--PSECHRLEAWYASASSRPGVRKT 667
CP+AQRTWIALEE+ Y++ EVSLYG+GGKP WF+DLNPKG VPVLV+DG+P+ SE T+D + EL+P +WR ++ RL GK AV + S+ + +L V+ + EA L + P + + AD SA PF R+ E E W A+ +R VR+T
Sbjct: 2 CPFAQRTWIALEEAGLPYKLTEVSLYGAGGKPKWFLDLNPKGLVPVLVIDGQPVAESEATLDAI--AELAPSLATPTPSKRQQWRDMLEQRLIPVGKAAVLNPSSK-NMAALRVVIAEWEAKLRERPGKGHFLCGEALSIADVSAVPFWSRLQEEMDCVGAEEFPLTHEWLAACRAREAVRRT 181
BLAST of mRNA_E-fasciculatus_F_contig1208.1626.1 vs. uniprot
Match: A0A7R9WB00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WB00_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.230e-32 Identity = 77/196 (39.29%), Postives = 107/196 (54.59%), Query Frame = 2
Query: 143 QFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDG--KPIVGSEETVDFLMPG------ELSPEA-------LRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASE-FTAADASAFPFLQRVHGEFGFPSE---CHRLEAWYASASSRPGVRKTIK 673
QF TN+ CPYAQ+ WIALE YEM EVSLYG+GGKP WF+DLNP G+VPVL G K + SE + + G +LS ++ WR + +R+ GK AV GG L ++L++L+ + GP E T AD +AFPFL R++ EFG ++ C + W + + P KT++
Sbjct: 42 QFYTNKMCPYAQKVWIALEVGGCPYEMTEVSLYGAGGKPDWFLDLNPDGQVPVLTCFGGAKIFIDSEYILSRIADGVVEGGSKLSMDSDDDREKMEEWRHAIANRVNPIGKAAVQRGGKNVKE--LMSLLKELDGKVK-GPYLCGETVTVADCAAFPFLWRINDEFGPLTDEEGCGNIRKWLDTCAENPSFSKTVQ 234
BLAST of mRNA_E-fasciculatus_F_contig1208.1626.1 vs. uniprot
Match: A0A7S4K6F8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6F8_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.130e-31 Identity = 77/197 (39.09%), Postives = 109/197 (55.33%), Query Frame = 2
Query: 137 NVQFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDG--KPIVGSE-----------ETVDFLMP-GELSPEALR-WRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASE-FTAADASAFPFLQRVHGEFGFPSE--CHRLEAWYASASSRPGVRKTIK 673
+ QF TN+ CP+AQ+ WIALE +EM EVSLYG+GGKP WFMDLNP+G+VPVL G K + SE E LMP +++ E + WR +++R+ GK AV GG D L +L++++ + GP + T AD +AFPFL R++ E+ E C + W ++ P KTI+
Sbjct: 70 STQFYTNKMCPFAQKVWIALEVGGCPHEMIEVSLYGAGGKPDWFMDLNPEGQVPVLTCFGGAKIFIDSEYILTRIADGVVEGGSKLMPDSDVNKEKMEEWRHDISNRVIPIGKLAVQKGGKNVDE--LMELLKEMDVKIK-GPYLCGDAVTVADCAAFPFLWRINDEWPLTEENGCENIRKWLDKCTANPAFAKTIQ 263
BLAST of mRNA_E-fasciculatus_F_contig1208.1626.1 vs. uniprot
Match: A0A7S0G9J8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G9J8_9STRA) HSP 1 Score: 125 bits (314), Expect = 4.310e-31 Identity = 75/206 (36.41%), Postives = 106/206 (51.46%), Query Frame = 2
Query: 143 QFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVV---DGKP---IVGSEETVDFLMPGE-----------------LSPEALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASEFTAADASAFPFLQRVHGEFGFP--SECHRLEAWYASASSRPGVRKTIKQDFW 685
+FVTN+ CP+AQ+ WIALE S T ++M+E+SLYG+ GKP WF LNP G VPVLV G+P I SE+ ++ + G+ L + WR + R+ GK AV G +T L +L DL + + T AD +AFPFL R+H EFG ++ L +W + P +KT+ Q+ W
Sbjct: 51 RFVTNKMCPFAQKAWIALECSETPFKMEEISLYGANGKPDWFWKLNPDGTVPVLVAATAKGRPDAIIADSEDILNSFVAGDVIGGNGVLTCDENQEQSLFQKQQWWRDTIQRRVNPIGKSAVLGAG----KTKLYDLLHDLNSEVVGPYLCGDRVTVADCAAFPFLWRIHNEFGLDEVNKNSNLLSWLRTCEGNPAFQKTV-QNSW 251
BLAST of mRNA_E-fasciculatus_F_contig1208.1626.1 vs. uniprot
Match: L1JRP8_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JRP8_GUITC) HSP 1 Score: 124 bits (311), Expect = 1.020e-29 Identity = 78/235 (33.19%), Postives = 121/235 (51.49%), Query Frame = 2
Query: 86 LICRSSLAWQSTLRMAANVQFVTNQKCPYAQRTWIALEESHTAYEMKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFL-----MPGELSP----EALRWRSIVNDRLKSAGKRAVFSGGSETDRTSLNAVLQDLEACLSDGPERASEFTAADASAFPFLQRVHGE---FGFP-SECHRLEAWYASASSRPGVRKTIKQDFWWWW*SCPRV--------GCPSS 727
L+ R A Q+T+ ++V TN+ CP+AQ+ WIALEE Y++ E+SLYGSGGKP WF+D+NPKG+VPVL K +V S+E + ++ G+L+ + W + + +GK + GS +TSLN L+ +E + +FT AD ++ PF QR+ E G E ++ AWY + ++P T+ + + + V GCPS
Sbjct: 52 LVLRVRGASQATM---SDVTLYTNKMCPFAQKAWIALEEKKVKYDLVEISLYGSGGKPRWFLDMNPKGQVPVLKHGDKVVVESDEILKYIDQHMGSTGDLTKGHESDVAAWMKFLGSEVLPSGKALINGYGS---KTSLNEALRRMEERIQGPFIFGGDFTLADIASAPFFQRMMTEQARLGLNRQEYPKIFAWYEAIKAKPSFSNTVVKSWXXXXRTSAHVQRRETKVKGCPSQ 280 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1208.1626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1208.1626.1 >prot_E-fasciculatus_F_contig1208.1626.1 ID=prot_E-fasciculatus_F_contig1208.1626.1|Name=mRNA_E-fasciculatus_F_contig1208.1626.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=214bp MKASTSLAAALICRSSLAWQSTLRMAANVQFVTNQKCPYAQRTWIALEESback to top mRNA from alignment at E-fasciculatus_F_contig1208:18177..19410+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1208.1626.1 ID=mRNA_E-fasciculatus_F_contig1208.1626.1|Name=mRNA_E-fasciculatus_F_contig1208.1626.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1234bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1208:18177..19410+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1208:18177..19410+ >mRNA_E-fasciculatus_F_contig1208.1626.1 ID=mRNA_E-fasciculatus_F_contig1208.1626.1|Name=mRNA_E-fasciculatus_F_contig1208.1626.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1284bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1208:18177..19410+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |