mRNA_E-fasciculatus_F_contig1208.1625.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1208.1625.1 vs. uniprot
Match: D7G778_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G778_ECTSI) HSP 1 Score: 539 bits (1388), Expect = 3.000e-186 Identity = 283/316 (89.56%), Postives = 289/316 (91.46%), Query Frame = 2
Query: 203 MASIMGGGWKGLRFVVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGNYDGQISKGVNGKASYVFNKDRVLPAGLSASSSTDTAYGKAFGTVTVDPQTKAAVVEGSIRNEEFGMFSTTLKASEKEGGVLGPLKWTSNPMSFPFAVQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDEASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVAVRDKSLQICSRQRPRSYRVGSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRGAGTGVASTVSLRQSFRMF 1150
MA IMGGGWK LR +VLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGNYDGQ+SKGV+GKASYVFNKDRVLPAGLSASSSTDTAYGKAFGTVTVDPQ K AVVEGSIRNEE GMFSTTLKASEKEGGVLGPLKWTSNP+SFPFA+QEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPD+ASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVA GSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRG GTGV STVSLRQSFRMF
Sbjct: 1 MAGIMGGGWKWLRVLVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGNYDGQLSKGVSGKASYVFNKDRVLPAGLSASSSTDTAYGKAFGTVTVDPQDKTAVVEGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVA-------------------GSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRGEGTGVGSTVSLRQSFRMF 297 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1208.1625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1208.1625.1 >prot_E-fasciculatus_F_contig1208.1625.1 ID=prot_E-fasciculatus_F_contig1208.1625.1|Name=mRNA_E-fasciculatus_F_contig1208.1625.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=317bp MASIMGGGWKGLRFVVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGback to top mRNA from alignment at E-fasciculatus_F_contig1208:13890..18038- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1208.1625.1 ID=mRNA_E-fasciculatus_F_contig1208.1625.1|Name=mRNA_E-fasciculatus_F_contig1208.1625.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4149bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1208:13890..18038- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1208:13890..18038- >mRNA_E-fasciculatus_F_contig1208.1625.1 ID=mRNA_E-fasciculatus_F_contig1208.1625.1|Name=mRNA_E-fasciculatus_F_contig1208.1625.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1902bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1208:13890..18038- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |