mRNA_E-fasciculatus_F_contig12072.1617.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12072.1617.1
Unique NamemRNA_E-fasciculatus_F_contig12072.1617.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12072.1617.1 vs. uniprot
Match: D7G096_ECTSI (Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G096_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 2.020e-115
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 1 
Query:  151 MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVVV 639
            MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGG+WKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVVV
Sbjct:    1 MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVVV 163
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BLAST of mRNA_E-fasciculatus_F_contig12072.1617.1 vs. uniprot
Match: A0A835Z4W6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W6_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.500e-88
Identity = 123/153 (80.39%), Postives = 140/153 (91.50%), Query Frame = 1 
Query:  163 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLD 621
            SP+KRRD DMMKLMMSDF VHIPDE SMHDF+VAFPGP +TPY+GG+WKVHV+LP+EYP++SPSIGFENR++HPNVDEMSGSVCLDVINQTWSPMFDLVNIF +F+PQLL+YPNPTDPLN EAAAL++RDPKAY  RIRE VRLHAS  +  D
Sbjct:    3 SPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAITFD 155
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BLAST of mRNA_E-fasciculatus_F_contig12072.1617.1 vs. uniprot
Match: A0A7S2AI60_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI60_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.420e-80
Identity = 116/153 (75.82%), Postives = 134/153 (87.58%), Query Frame = 1 
Query:  160 MSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 618
            ++P+KRR  DMMKLMMSD+EV+IPDESSMHDF V F GP DTPY+GG+WK+HVTLP  YPFKSPSIGF+NRMFHPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+P LL YPNPTDPLNGEAAAL+MRDP AY  RIRE VR  A+  + L
Sbjct:    5 VTPNKRRHQDMMKLMMSDYEVNIPDESSMHDFFVKFEGPPDTPYEGGVWKIHVTLPPAYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEVFLPHLLRYPNPTDPLNGEAAALMMRDPDAYALRIREHVRQFATARIDL 157
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BLAST of mRNA_E-fasciculatus_F_contig12072.1617.1 vs. uniprot
Match: A0A7S2W0L0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0L0_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.090e-78
Identity = 111/152 (73.03%), Postives = 133/152 (87.50%), Query Frame = 1 
Query:  169 SKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDG 624
            SKR   DMMKLMMSD+EVHIP+E S+H+F V F GP +TPY+GG+WKVHV LP++YPFKSPSIGF+NR++HPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+PQLL YPNPTDPLNGEA AL+MRDP+AY +RIR+ VR  AS  V L G
Sbjct:   20 SKRMHRDMMKLMMSDYEVHIPNEQSVHEFFVKFHGPAETPYEGGVWKVHVMLPRDYPFKSPSIGFKNRIYHPNVDDLSGSVCLDVINQTWSPMFNLVNIFEIFLPQLLRYPNPTDPLNGEAGALMMRDPEAYASRIRDYVRSFASSTVELKG 171
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BLAST of mRNA_E-fasciculatus_F_contig12072.1617.1 vs. uniprot
Match: A0A2D4C6N9_PYTIN (Ubiquitin-conjugating enzyme E2, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6N9_PYTIN)

HSP 1 Score: 240 bits (612), Expect = 6.610e-78
Identity = 109/153 (71.24%), Postives = 136/153 (88.89%), Query Frame = 1 
Query:  160 MSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 618
            MS +KRR+ D+MKLMMS+++VH+ DES  +DF V F GP+DTPY+GG+WK+HV+LPKEYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMFDL+NIF +FIPQLL YPNPTDPLNGEAA+LLM+D +AY+ ++RE VR +AS P+ +
Sbjct:    1 MSSNKRREKDVMKLMMSNYDVHLTDESRANDFHVKFHGPKDTPYEGGLWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFDLLNIFDMFIPQLLRYPNPTDPLNGEAASLLMKDIEAYNAKVREYVRNYASQPIDM 153
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BLAST of mRNA_E-fasciculatus_F_contig12072.1617.1 vs. uniprot
Match: A0A7S2BA17_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA17_9STRA)

HSP 1 Score: 243 bits (621), Expect = 9.530e-78
Identity = 115/154 (74.68%), Postives = 132/154 (85.71%), Query Frame = 1 
Query:  163 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDG 624
            +P+KRR  DMMKLMMSD+EV IPDES MHDF V F GP +TPY+ G WK+HVTLP +YPFKSPSIGF+NRMFHPNVD++SGSVCLDVINQTWSPMF+LVNIF+ F+P LL YPNPTDPLNGEAAALLMRDP AY+ RIR+ VR +AS  + L G
Sbjct:   65 NPNKRRHQDMMKLMMSDYEVLIPDESCMHDFFVKFDGPAETPYENGSWKIHVTLPADYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEQFLPHLLRYPNPTDPLNGEAAALLMRDPDAYNLRIRDHVRQYASAKIDLVG 218
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BLAST of mRNA_E-fasciculatus_F_contig12072.1617.1 vs. uniprot
Match: A0A8K1C4X5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4X5_PYTOL)

HSP 1 Score: 234 bits (597), Expect = 1.300e-75
Identity = 105/152 (69.08%), Postives = 134/152 (88.16%), Query Frame = 1 
Query:  163 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 618
            S +KRR+TD+MKLMMSD+EV + DE+  +DF V F GP +TPY+GG+WK+HV+LPKEYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMF+LVN+F++FIPQLL YPNP+DPLNGEAA+LLM+D  AY+ +++E VR +AS P+ +
Sbjct:    3 SMNKRRETDVMKLMMSDYEVQLTDETKTNDFHVKFHGPAETPYEGGVWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELVNVFEVFIPQLLRYPNPSDPLNGEAASLLMKDADAYNAKVKEYVRNYASQPIDM 154
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BLAST of mRNA_E-fasciculatus_F_contig12072.1617.1 vs. uniprot
Match: A0A7S3XS74_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS74_HETAK)

HSP 1 Score: 238 bits (606), Expect = 3.140e-75
Identity = 109/150 (72.67%), Postives = 131/150 (87.33%), Query Frame = 1 
Query:  154 LSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHAS 603
            LS SPSKRRD D+++LMMSD+EV +PDE  ++DF VAF GPE TPY+GG+W VHVTLP EYP+KSPSIGF NR+FHPNVD+MSGSVCLDVINQTWSPMFDL+NIF++F+PQLL  PNPTDPLNGEAAALL+RDP+AY  +++  V  +AS
Sbjct:   80 LSSSPSKRRDNDLVRLMMSDYEVTLPDEDKIYDFHVAFHGPEKTPYEGGVWDVHVTLPPEYPYKSPSIGFSNRLFHPNVDDMSGSVCLDVINQTWSPMFDLINIFEVFLPQLLQDPNPTDPLNGEAAALLLRDPEAYRAKVQAYVHRYAS 229
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BLAST of mRNA_E-fasciculatus_F_contig12072.1617.1 vs. uniprot
Match: H3G861_PHYRM (UBC core domain-containing protein n=31 Tax=Peronosporaceae TaxID=4777 RepID=H3G861_PHYRM)

HSP 1 Score: 233 bits (593), Expect = 5.120e-75
Identity = 104/150 (69.33%), Postives = 131/150 (87.33%), Query Frame = 1 
Query:  169 SKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 618
            +KRR+TD+MKLMMSD+EVH+ DE+   D  + F GP+DTPY+GG WK+HVTLPK+YPFKSPSIGF NR++HPNVDE SGSVCLDVINQTWSPMF+LVNIF +FIPQLL YPNP+DPLNGEAA+LLM+D ++Y+ +++E VR +AS P+ +
Sbjct:    5 NKRRETDVMKLMMSDYEVHLTDETKTSDLDIKFNGPKDTPYEGGSWKIHVTLPKDYPFKSPSIGFMNRIYHPNVDETSGSVCLDVINQTWSPMFELVNIFDVFIPQLLRYPNPSDPLNGEAASLLMKDAESYNRKVKEYVRNYASQPIEM 154
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BLAST of mRNA_E-fasciculatus_F_contig12072.1617.1 vs. uniprot
Match: K3WGM6_GLOUD (UBC core domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGM6_GLOUD)

HSP 1 Score: 231 bits (589), Expect = 2.080e-74
Identity = 105/153 (68.63%), Postives = 134/153 (87.58%), Query Frame = 1 
Query:  163 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGIWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLD 621
            S ++RR+TD+MKLMMSD+EV + DES   DF V F GP+D+PY+GG WK+HV+LP+EYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMF+L+N+F +FIPQLL YPNP+DPLNGEAA+LLM+D ++Y+N++RE VR +AS   H+D
Sbjct:    3 SMNRRRETDVMKLMMSDYEVQLTDESKTSDFHVKFHGPKDSPYEGGSWKIHVSLPREYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELLNVFDVFIPQLLRYPNPSDPLNGEAASLLMKDAESYNNKVREYVRTYASQ--HID 153
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12072.1617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G096_ECTSI2.020e-11599.39Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectoc... [more]
A0A835Z4W6_9STRA1.500e-8880.39Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S2AI60_9STRA1.420e-8075.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W0L0_9STRA2.090e-7873.03Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2D4C6N9_PYTIN6.610e-7871.24Ubiquitin-conjugating enzyme E2, putative n=1 Tax=... [more]
A0A7S2BA17_9STRA9.530e-7874.68Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8K1C4X5_PYTOL1.300e-7569.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3XS74_HETAK3.140e-7572.67Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
H3G861_PHYRM5.120e-7569.33UBC core domain-containing protein n=31 Tax=Perono... [more]
K3WGM6_GLOUD2.080e-7468.63UBC core domain-containing protein n=2 Tax=Pythiac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12072contigE-fasciculatus_F_contig12072:1..3927 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.3
Seed ortholog evalue2.6e-91
Seed eggNOG ortholog2880.D7G096
Preferred nameUBC4
KEGG koko:K10576
KEGG Pathwayko04120,map04120
GOsGO:0000209,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006109,GO:0006111,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010498,GO:0010675,GO:0010677,GO:0010906,GO:0016567,GO:0016740,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0019941,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031625,GO:0032446,GO:0036211,GO:0043161,GO:0043170,GO:0043255,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044424,GO:0044444,GO:0044464,GO:0045721,GO:0045912,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051603,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0062012,GO:0062014,GO:0065007,GO:0070647,GO:0070936,GO:0070979,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.ubiquitin protein ligase binding
EggNOG OGsKOG0416@1,KOG0416@2759
EC2.3.2.23
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionubiquitin-conjugating enzyme type E2
Ec32 orthologEc-14_005020.1
Exons5
Model size648
Cds size498
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12072.1617.1prot_E-fasciculatus_F_contig12072.1617.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12072 1..3532 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927716.0434446-CDS-E-fasciculatus_F_contig12072:0..1971622927716.0434446-CDS-E-fasciculatus_F_contig12072:0..197Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12072 1..197 -
1695995663.5990782-CDS-E-fasciculatus_F_contig12072:0..1971695995663.5990782-CDS-E-fasciculatus_F_contig12072:0..197Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12072 1..197 -
1622927716.0548046-CDS-E-fasciculatus_F_contig12072:2096..22641622927716.0548046-CDS-E-fasciculatus_F_contig12072:2096..2264Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12072 2097..2264 -
1695995663.6093953-CDS-E-fasciculatus_F_contig12072:2096..22641695995663.6093953-CDS-E-fasciculatus_F_contig12072:2096..2264Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12072 2097..2264 -
1622927716.0701492-CDS-E-fasciculatus_F_contig12072:2953..30361622927716.0701492-CDS-E-fasciculatus_F_contig12072:2953..3036Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12072 2954..3036 -
1695995663.617341-CDS-E-fasciculatus_F_contig12072:2953..30361695995663.617341-CDS-E-fasciculatus_F_contig12072:2953..3036Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12072 2954..3036 -
1622927716.0845373-CDS-E-fasciculatus_F_contig12072:3482..35321622927716.0845373-CDS-E-fasciculatus_F_contig12072:3482..3532Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12072 3483..3532 -
1695995663.6256886-CDS-E-fasciculatus_F_contig12072:3482..35321695995663.6256886-CDS-E-fasciculatus_F_contig12072:3482..3532Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12072 3483..3532 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927716.1007993-UTR-E-fasciculatus_F_contig12072:3532..35931622927716.1007993-UTR-E-fasciculatus_F_contig12072:3532..3593Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12072 3533..3593 -
1695995663.6360743-UTR-E-fasciculatus_F_contig12072:3532..35931695995663.6360743-UTR-E-fasciculatus_F_contig12072:3532..3593Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12072 3533..3593 -
1622927716.1169863-UTR-E-fasciculatus_F_contig12072:3838..39271622927716.1169863-UTR-E-fasciculatus_F_contig12072:3838..3927Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12072 3839..3927 -
1695995663.6476514-UTR-E-fasciculatus_F_contig12072:3838..39271695995663.6476514-UTR-E-fasciculatus_F_contig12072:3838..3927Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12072 3839..3927 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12072.1617.1

>prot_E-fasciculatus_F_contig12072.1617.1 ID=prot_E-fasciculatus_F_contig12072.1617.1|Name=mRNA_E-fasciculatus_F_contig12072.1617.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=166bp
MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGG
IWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMF
DLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHA
SDPVHLDGTPVVVAPP
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mRNA from alignment at E-fasciculatus_F_contig12072:1..3927-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12072.1617.1 ID=mRNA_E-fasciculatus_F_contig12072.1617.1|Name=mRNA_E-fasciculatus_F_contig12072.1617.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3927bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12072:1..3927- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TGACACGCCTGGTGACGCAAGACTCGCGAGCACAGGGCAAACAGAACCAA
GTCCCACCGGGGATTTCAATTTGTCTCTCCAGCGAGTAGGTGCGTCACGC
CCACGGCCGGCCATGCGTGCGCACGGCCCGTGGGGAATAGAGGGGCGTCG
TGTTTGTCGAGGTTGTCCCGCTCTTGTCTAGGGGTGGGGCAGGTGTGAGC
GTCGTTGAGGTAGAACGCCCAGAGGGCCCGCCGCCGTCGTGTTGCTTGGA
AAATGGCGTAATATTCCTCCCACGAGAGGGGGCTTGTTGAACCTGACCTC
TTGCCCGCTCTTTCGTCTCTTTCCAAAACGCCAGCCACCACGCAAGACCT
CCGCGCCAGCTTCACGAGCTCCATCTACCATCGAGGGCGGAGAAGATGTT
GTCAATGTCACCTTCAAAACGCCGGGACACCGATATGATGAAGCTGTGAG
TGCAGAGACCAGGGAGCAGGGAGCGTACAGCAGCAGACGAAAAGAGAGCA
ATTTTTTTTTTGGCGAACGAACACACCAAACGCACTTCTCTCTCTGCTCC
CGCGCGGAAGGAAAAAGCGGCAGCATTTACAGCGTGGAAATGCACGCGAC
CGGCGCCTCGAGTGCGGCGTACCGAGTAGCCCACGTCGTCCTTGTGTGCG
CATCCCTCGCGCTTCCAACGTGTGACGCATCGTCTCCTCTGGCACTCTTT
TTTTTTGTCGCGTTTTTTTTCTTGGTGATGTCCACTACCAAGTGCTGCAC
ACGTACCCCACTCCGGCCAAACTCGATGCTGATGATGATGCATGCCTCAG
GTTGCTGCTGCGGATGATGATTTTTTCATTTTTTCCTCCTCCCTGCTTGC
TCCCCCCCCCTCCTCTCCGTTCCGCTCTTCCACGCCGGAAGAATGATGAG
CGACTTCGAGGTGCACATTCCGGACGAGTCGAGCATGCACGACTTCTTGG
TGGCCTTCCCAGGGCCTGAGGACAGTGAGTTCAGAGACCAGACAAGACAC
AGAGCAGACAGCAGTTTTTTCTGACTTTTTGTGAGCGCTCTTCTTTCTCC
AGCAGGTTTGAACGTTGCTCCTTTTTTTTTCAGCGATTACTTGTTTCGAC
CCTTTGCCACATAAATAGTTTCTTTCGTCCGCCGTGTTGTTTTCCACGGA
CCAACCCGCCATGCGTGCGCCTGAACTGTGCTTCGCGGGGGGGGGACCCG
CCTCCCAAGAGCTATTAGGTGTACAGCAATGCAACCGCCGTTCGCTGCCT
GCGTGACACCCAATTCTTCGTCGTTCTGCTGTATCTACAGCGCATTCTCT
TTTGTATGAGTTTGTATGAGGCAAGCAAACAGCAAACACAGCGAGCGAGC
GGTGGTTGCGTCTTGGTCGGTTCGCGCATTTTTCCTCTCAGGATGTGGAT
GCGTTGAGCTGGCTCCCCCCCCGCTGGTGCCCCGACAACAAGGCAAAAAC
ACGCACACATATGTGTTATGCGCTATGCGCGCACGTGTGTGTGGACGCGT
TGCTAATCCCCGCCTCTCTCACCTCCCTGCTTGTTCTGGCCCGTTGGATC
TATTAGACTATACTAATTTCGTCATGTTTGTATGTTGTGTGTCCTTCCGT
TCGCGTCCCTGCTGTATGTGCACGTTGTGTCCCGTGAACTGCTGTAAAAA
CATATCGTACCAGCCCCGTACCAGGGAGGGATCTGGAAGGTGCACGTCAC
GCTGCCCAAGGAATACCCTTTCAAGTCGCCCTCGATCGGATTCGAGAACC
GCATGTTCCACCCCAACGTCGATGAGATGTCCGGCTCCGTGTGCTTGGAC
GTCATCAACCAGACCTGGAGCCCAATGTTCGGTGAGTAGATGTACATGTG
CATTACAGGCTGGCAAACCGGAGGTTCCTTTTGACAAACCCTTTGCGATC
TGCGATGCGTATGCATATCGTACATACTGCATCGCGTGCTCATAGAGTGG
TGTTGCTATATTTAAACGAAGAGTAGATGTTAGAAAGATGTTTTGTTCCG
ACGGCGGCCACGCAAGCGCTCTTTGCTCCTGCTGGAATAACTGCTGTCGT
TGTCTATGGCACAGCAGTCTCGTCGCTCGCTTGCAGTTACCGGACCCTTG
TTCGTACAAGGATTCCACACGGCGCATGTATTGAGTCCGCTCTGCGGTGA
ATACATTCAGTTATGCATACTGTAGATGTGTACAGTATGCAAGTCTGGTT
GAATAGGCAAGTCATTGCAGCGTAACAAGTCATTATACATTTGTCAGTAA
CTGATGCGGAGTATCAGCAGTATGCATAGTTGCCCTTCGACCAACATTCG
GAAGAGAATGATGTGTGCTACATATTTATGTAGCAAGCCGCCATCCTCCA
CAGAAGCACATTGCGATGCCGTTTTTAGTTGATATTTAAACATGTAGCAG
ACCCTTCCGTGGACGAATGGGAAGCCCAGTTCAGCAATAGTTTTGGTGAT
TCACGTCCATGCTAACATGGAAGGGCGCATGGCATAGGAATGTATGGGTA
CGGACGGGTGCTTGTGCCCAAACTAATAGTTTTTCTTGTGGATACAGCAG
TAGCTAACCTGCGGGTGTAGGTCGGGCATTCGAATGTAGGCTTTGCGCAT
ATCGCACCGAGAGCTAAAAAGCGCGCTTACATTGGAGGAAGCGTTGAAGT
CTTCCCTACTTGAGTTTAACAGAAAATAATTTTTGTACCATAAACGAAGG
CATGGACCGCCGTCGGGTATTGTGTTTTGGGGGTGATGAAAACTGGCCTA
CGTAAAGCATGGAAAGAGAGTGTCAACTGCTCTTGTCCAACCAAACGGGT
CGCTCTTTCAACGTTTCGCTGCAAGTGTTTTTCGCCATCTCACTTCGTAT
ATTTGTAGATTGTAGAAAACAAGCAGGGCAGAGCTGCGTGTACTGGCTAG
CTCTGCATAGGCCCATGACGACACCACTGTGTGATGGAATGGTACGCAAC
AGCGGTATGTGTGTTGCGTGGTCTTTGTGTCTTTTTTTCGGTATCGACCG
CGCTAACCGGCTGACTAATGAAAAGGCGTCAGTGTCAGCGGGTAAAAATC
AAGGTCCCTTCGAAAAATGCGCCATGCGCTAAATGCGAATGCCAGTATGA
ATCTCTCCACGTAAACATATTCTTTCACAGACGCACGCATCACAGCTCCG
CACATGCCCTCGCCCGAACCCAGGAAGCCACTGATGCAAAGAGCGGAGGG
CAGCAAAAGGGTTAATTCAAAGTGTGCGTGTGCGTGTGTGTGTGTCTTTG
TTGTTACTATCGATCGCGCTAACCGGCTGACCAATGAAAAGACGCCAGTC
TCAATGTGTGTGTGTTTTGTCACATCTTTTCTGGCGCTAGTGTATACCCG
GAGCCTTTTATAAGTAATTTACGCATCAGCTTGGTCACACACGAGGAAAG
GAAGACATTTACCTTCTTCGTGTTTTTTTTTTTTGTCCCACCTTTCCTCT
GCGGTGCTTGCCTTCGATTTTTTAACGCGAGAATGGTTCGGCAGCCCCTT
CTGTCCTACTATACTCACGAACAAACCGCTTTCCACGACATAATTGCACA
GCACTGTTGACTCCCGAGAGATTTGAACCACAACCTAGTACGTCTAACGA
GGTTACCCACTGTAGACCTATACACGATAAATACGGCACACGTAAAACAT
GTTTCCTTGCCGCAGAACAGCGGTCGCCGTGACCACCCCCCTCCCCGCCC
GCCCCTCTCTTGCCTTTTGATCCAAACCAGACCTGGTGAACATCTTCAAG
CTGTTCATCCCGCAGCTGCTGAGCTACCCGAACCCCACGGACCCCTTGAA
CGGCGAGGCGGCGGCGCTCTTGATGCGCGACCCCAAGGCCTACGACAACC
GCATCCGCGAGTGCGTCCGCCTCCACGCGTCCGACCCCGTACACCTCGAC
GGAACCCCCGTTGTCGTCGCACCCCCT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12072:1..3927-

>mRNA_E-fasciculatus_F_contig12072.1617.1 ID=mRNA_E-fasciculatus_F_contig12072.1617.1|Name=mRNA_E-fasciculatus_F_contig12072.1617.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=996bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12072:1..3927- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTTGTCAATGTCACCTTCAAAACGCCGGGACACCGATATGATGAAGCT
ATGTTGTCAATGTCACCTTCAAAACGCCGGGACACCGATATGATGAAGCT
AATGATGAGCGACTTCGAGGTGCACATTCCGGACGAGTCGAGCATGCACG
ACTTCTTGGTGGCCTTCCCAGGGCCTGAGGACAAATGATGAGCGACTTCG
AGGTGCACATTCCGGACGAGTCGAGCATGCACGACTTCTTGGTGGCCTTC
CCAGGGCCTGAGGACACCCCGTACCAGGGAGGGATCTGGAAGGTGCACGT
CACGCTGCCCAAGGAATACCCTTTCAAGTCGCCCTCGATCGGATTCGAGA
ACCGCATGTTCCACCCCAACGTCGATGAGATGTCCGGCTCCGTGTGCTTG
GACGTCATCAACCAGACCTGGAGCCCAATGTTCGCCCCGTACCAGGGAGG
GATCTGGAAGGTGCACGTCACGCTGCCCAAGGAATACCCTTTCAAGTCGC
CCTCGATCGGATTCGAGAACCGCATGTTCCACCCCAACGTCGATGAGATG
TCCGGCTCCGTGTGCTTGGACGTCATCAACCAGACCTGGAGCCCAATGTT
CGACCTGGTGAACATCTTCAAGCTGTTCATCCCGCAGCTGCTGAGCTACC
CGAACCCCACGGACCCCTTGAACGGCGAGGCGGCGGCGCTCTTGATGCGC
GACCCCAAGGCCTACGACAACCGCATCCGCGAGTGCGTCCGCCTCCACGC
GTCCGACCCCGTACACCTCGACGGAACCCCCGTTGTCGTCGCACCCCCTA
CCTGGTGAACATCTTCAAGCTGTTCATCCCGCAGCTGCTGAGCTACCCGA
ACCCCACGGACCCCTTGAACGGCGAGGCGGCGGCGCTCTTGATGCGCGAC
CCCAAGGCCTACGACAACCGCATCCGCGAGTGCGTCCGCCTCCACGCGTC
CGACCCCGTACACCTCGACGGAACCCCCGTTGTCGTCGCACCCCCT
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