mRNA_E-fasciculatus_F_contig12062.1610.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12062.1610.1 vs. uniprot
Match: D7FK62_ECTSI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK62_ECTSI) HSP 1 Score: 343 bits (881), Expect = 2.630e-116 Identity = 185/211 (87.68%), Postives = 191/211 (90.52%), Query Frame = 1
Query: 1 KGSPLCSGAIRRLARAPTPSLQSAPQLSTACGFFPPTWASRLSAAASPSPSPFQHVSRRHVSTTIGSSSXXXXXXXPNTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPEGTLGKAYTNFMSENNFSPDGRSPVQYVDDPDLAYVMRR 633
+GSPL SGAIRRLARAPTPSLQSAP+ STACGF P T ASRLSAAASP PSPFQH SRR STTIGS NTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALP+GTLGK+Y+NFM ENNFSPDGRSPV+YVDDPDLAYVMRR
Sbjct: 6 RGSPLSSGAIRRLARAPTPSLQSAPRFSTACGFTP-TSASRLSAAASPRPSPFQHGSRRPASTTIGSGDSTTA----NTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR 211
BLAST of mRNA_E-fasciculatus_F_contig12062.1610.1 vs. uniprot
Match: A0A6H5K3Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y3_9PHAE) HSP 1 Score: 206 bits (524), Expect = 1.340e-64 Identity = 101/106 (95.28%), Postives = 105/106 (99.06%), Query Frame = 1
Query: 313 MAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPEGTLGKAYTNFMSENNFSPDGRSPVQYVDDPDLAYVMR 630
MAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALP+GTLGK+Y+NFM ENNFSPDGRSPV+YVDDPDLAYVMR
Sbjct: 1 MAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMR 106
BLAST of mRNA_E-fasciculatus_F_contig12062.1610.1 vs. uniprot
Match: A0A835Z0M6_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M6_9STRA) HSP 1 Score: 153 bits (387), Expect = 6.780e-43 Identity = 74/131 (56.49%), Postives = 92/131 (70.23%), Query Frame = 1
Query: 241 ASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPEGTLGKAYTNFMSENNFSPDGRSPVQYVDDPDLAYVMRR 633
A+G KR+LY GH P SP QR + + +A DPERADMVA LGE TG AL+Q++ ML DP+G E+LR RP ++E +VDL AL LP GT GKAY +FM+ N F+PD R PV++VDD DLAYVM R
Sbjct: 14 AAGEPCKRILYKGHNPISPSQRVGLTFISAFSAFADPERADMVAALGETTGHRALKQMHHRMLQDPDGIELLRERPQLDEHSVDLEALGQLPSGTFGKAYADFMAHNQFTPDSRLPVRFVDDADLAYVMAR 144
BLAST of mRNA_E-fasciculatus_F_contig12062.1610.1 vs. uniprot
Match: A0A7R8ZZ82_9CRUS (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8ZZ82_9CRUS) HSP 1 Score: 140 bits (352), Expect = 2.010e-37 Identity = 70/122 (57.38%), Postives = 88/122 (72.13%), Query Frame = 1
Query: 268 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPEGTLGKAYTNFMSENNFSPDGRSPVQYVDDPDLAYVMRR 633
LY GH T+PLQ+ + +T+ AL P R DMVA GEVTG LAL ++R ML D EG++ILR +P +N TVDL AL +LPEGTLG+AYT F+ N SPD R PV++VDDP+LAYVM+R
Sbjct: 42 LYPGHIRTTPLQKALLGVGSTLMALYSPARDDMVAVNGEVTGMLALPWMHRKMLEDAEGQQILREKPKLNSYTVDLDALRSLPEGTLGRAYTQFLDVNGVSPDTRLPVRFVDDPELAYVMQR 163
BLAST of mRNA_E-fasciculatus_F_contig12062.1610.1 vs. uniprot
Match: A0A813SSC9_9BILA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813SSC9_9BILA) HSP 1 Score: 137 bits (346), Expect = 6.000e-37 Identity = 64/122 (52.46%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 268 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPEGTLGKAYTNFMSENNFSPDGRSPVQYVDDPDLAYVMRR 633
LYS H PTS LQ++ +A + + ++ DP R DM++ GE TG LAL+ + + M+ DPEG +ILR RP+IN +TVDL L LP GTLGK Y+NF+S+ +PD R PV ++DD DLAY+MRR
Sbjct: 4 LYSSHIPTSFLQKSLLAVGSGIMSISDPSRDDMISVFGETTGSLALKYIQQKMILDPEGEQILRDRPIINSSTVDLEQLKMLPAGTLGKEYSNFLSKYTLTPDARRPVNFIDDRDLAYIMRR 125
BLAST of mRNA_E-fasciculatus_F_contig12062.1610.1 vs. uniprot
Match: A0A819M3J9_9BILA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819M3J9_9BILA) HSP 1 Score: 136 bits (342), Expect = 2.380e-36 Identity = 62/122 (50.82%), Postives = 88/122 (72.13%), Query Frame = 1
Query: 268 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPEGTLGKAYTNFMSENNFSPDGRSPVQYVDDPDLAYVMRR 633
LY+ H+PT+ +Q++ +A + +T+++DP R DM++ GE TG LAL+ + M DPEG +IL+ RPVIN TVDL L LP GTLGK Y+NF+++ N +PD R PV ++DD DLAY+MRR
Sbjct: 4 LYATHKPTNLIQKSILAVGSGITSILDPSRDDMISVFGETTGILALKYIQEKMTIDPEGDQILKKRPVINTTTVDLDYLKTLPTGTLGKEYSNFLAKYNLTPDARRPVSFIDDADLAYIMRR 125
BLAST of mRNA_E-fasciculatus_F_contig12062.1610.1 vs. uniprot
Match: A0A485K2E7_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K2E7_9STRA) HSP 1 Score: 136 bits (342), Expect = 6.700e-36 Identity = 68/133 (51.13%), Postives = 88/133 (66.17%), Query Frame = 1
Query: 235 TTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPEGTLGKAYTNFMSENNFSPDGRSPVQYVDDPDLAYVMRR 633
T+A+G K VLY H PTSPLQ+ A+A + T DPER DM+A LG+VTG +AL Q++ M +DP GR+IL +P VD+ AL LP T G AYT FM + F DGR+ V++VDDP+LAYVM+R
Sbjct: 31 TSAAGLPTKHVLYKAHVPTSPLQKIAVAVGSAFTVFTDPERGDMLAALGDVTGAVALRQMHLKMYSDPVGRQILAEKPRFRSHLVDIDALRLLPTDTFGFAYTQFMDAHGFEADGRADVKFVDDPELAYVMQR 163
BLAST of mRNA_E-fasciculatus_F_contig12062.1610.1 vs. uniprot
Match: A0A1Y1YE21_9FUNG (Ubiquinone biosynthesis protein COQ4, mitochondrial n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YE21_9FUNG) HSP 1 Score: 135 bits (341), Expect = 9.440e-36 Identity = 65/122 (53.28%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 268 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPEGTLGKAYTNFMSENNFSPDGRSPVQYVDDPDLAYVMRR 633
LY GH PTSPL++ A++ A TAL +P R DMVA LGE TG + L ++ ML DP GR ILR RPV+N T++L L LP+GT G+ Y ++ E +PD R+PV YVDDP+LAYV+RR
Sbjct: 45 LYEGHIPTSPLEKGALSVKAAFTALFNPLRGDMVAVLGETTGSMVLARIRDKMLLDPVGRRILRERPVLNSKTLNLPGLRTLPDGTFGREYVRWLDEQQVTPDTRAPVHYVDDPELAYVIRR 166
BLAST of mRNA_E-fasciculatus_F_contig12062.1610.1 vs. uniprot
Match: A0A816PGK5_9BILA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=3 Tax=Rotaria TaxID=231623 RepID=A0A816PGK5_9BILA) HSP 1 Score: 134 bits (338), Expect = 9.460e-36 Identity = 63/122 (51.64%), Postives = 88/122 (72.13%), Query Frame = 1
Query: 268 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPEGTLGKAYTNFMSENNFSPDGRSPVQYVDDPDLAYVMRR 633
LY H+PT+ +Q++ +A + V +++DP R DM++ GE TG LAL+ + M+ DPEG EIL+ RPVIN TVDL L +LP GTLGK Y+NF+++ N +PD R PV ++DD +LAYVMRR
Sbjct: 4 LYGTHKPTNLVQKSILAVGSGVMSILDPSRDDMISIFGETTGVLALKSMQEKMIVDPEGDEILKKRPVINTRTVDLNFLKSLPAGTLGKEYSNFLAKYNLTPDARRPVSFIDDVELAYVMRR 125
BLAST of mRNA_E-fasciculatus_F_contig12062.1610.1 vs. uniprot
Match: A0A3S1A143_ELYCH (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1A143_ELYCH) HSP 1 Score: 135 bits (340), Expect = 2.660e-35 Identity = 62/123 (50.41%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 265 VLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPEGTLGKAYTNFMSENNFSPDGRSPVQYVDDPDLAYVMRR 633
+LY GH T+ Q+ +A + + +++P R DM+ LGE TG +AL ++R M+ADPEGR+IL +PVIN TVD+ L LPEGT GK Y +F++++NF+PD R PV +VDDPDL YVM R
Sbjct: 62 MLYPGHISTTTFQKALLAFGSGIACMVNPARDDMICALGETTGSVALRYMHRKMMADPEGRQILEDKPVINTDTVDVDYLGTLPEGTFGKEYWHFLNKHNFNPDARRPVNFVDDPDLVYVMLR 184 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12062.1610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12062.1610.1 >prot_E-fasciculatus_F_contig12062.1610.1 ID=prot_E-fasciculatus_F_contig12062.1610.1|Name=mRNA_E-fasciculatus_F_contig12062.1610.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=212bp KGSPLCSGAIRRLARAPTPSLQSAPQLSTACGFFPPTWASRLSAAASPSPback to top mRNA from alignment at E-fasciculatus_F_contig12062:256..1607- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12062.1610.1 ID=mRNA_E-fasciculatus_F_contig12062.1610.1|Name=mRNA_E-fasciculatus_F_contig12062.1610.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1352bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12062:256..1607- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12062:256..1607- >mRNA_E-fasciculatus_F_contig12062.1610.1 ID=mRNA_E-fasciculatus_F_contig12062.1610.1|Name=mRNA_E-fasciculatus_F_contig12062.1610.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1272bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12062:256..1607- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |