mRNA_E-fasciculatus_F_contig12060.1609.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12060.1609.1
Unique NamemRNA_E-fasciculatus_F_contig12060.1609.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12060.1609.1 vs. uniprot
Match: D7FLX6_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX6_ECTSI)

HSP 1 Score: 536 bits (1381), Expect = 2.690e-189
Identity = 261/300 (87.00%), Postives = 276/300 (92.00%), Query Frame = 1 
Query:    1 LEVGEE-PTRSPQSKDEKKGDDSTEPPXXXXXXXXXXXXSWKGGGGPFGLDGDWRDALQEEGGDGSEDGLRGEACMTHEKRKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDSTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGCGCLDLKREVLINHYLGSRGDYLERVHRYWS 897
            +E+GEE PT+SPQSKDEKK DDSTEPP            SWKG GGPFG+DGDWR+ALQE+GGDG+E+GLRGEACMTHE RKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVD TSEVLKPFV+AGIVRYIFDMIPRR AQMEPLNRCLRHYINRKK+D ENAPSWLLFHD DEYVYP DTS+TL+DAL KHESTCCA+VRRIQYGSGGH EMPRGLVMDSF+AHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGC CLDLK+EVLINHYLGSRGDYLERVHRYWS
Sbjct:  104 VELGEELPTQSPQSKDEKKSDDSTEPPE-----------SWKGRGGPFGIDGDWRNALQEDGGDGAENGLRGEACMTHENRKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRNAQMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNKHESTCCALVRRIQYGSGGHDEMPRGLVMDSFMAHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGCACLDLKQEVLINHYLGSRGDYLERVHRYWS 392
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12060.1609.1 vs. uniprot
Match: A0A6H5KB75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB75_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 2.630e-99
Identity = 156/291 (53.61%), Postives = 197/291 (67.70%), Query Frame = 1 
Query:  118 WKGGGGPFGLDGDWRDALQEEGGD-----GSEDGLRGE-ACMTHEKRKEV-----------------AVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDSTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHAN--PKVVVNLTPTESD--PVAPPLKSMHKAEGCGCLDLKRE----VLINHYLGSRGDYLERVHRYWS 897
            W+G GG FGL  DWR+AL   GG      G+ +GLRG  AC+  +K+ EV                 AVCLRTKD+ RFLPEW+AFHYA+GVDE+ IYDD+S D+T EVL+PFV AGIVRYIF++I  R  QM+PLN CL  ++ R+    E+A +W+LFHDTDEY+YP DTS+ + DAL+KH  TCCA+V R+QYGS GH EMPRGL++++FL H +      N  PKV+VNL P+E +   V PPL+SMH AEGC C   K      + INHYLGS GDY++R  RYW 
Sbjct:  149 WRGAGGEFGLSADWREALSVPGGGDDEGAGAGEGLRGGGACLAEKKQAEVREILEKRGTASTTTNRVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTKEVLRPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGQQFGNGLPKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGSKSSGVSNLRINHYLGSIGDYMDRTARYWE 439
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BLAST of mRNA_E-fasciculatus_F_contig12060.1609.1 vs. uniprot
Match: D7FYE9_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE9_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 2.890e-90
Identity = 131/226 (57.96%), Postives = 166/226 (73.45%), Query Frame = 1 
Query:  244 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDSTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHAN--PKVVVNLTPTESDP--VAPPLKSMHKAEGCGCLDLK----REVLINHYLGSRGDYLERVHRYWS 897
            +VA+CLRTKD+ RFLPEW+AFHYA+GVDE+ IYDD+S D+T EVL PFV AGIVRYIF++I  R  QM+PLN CL   + R+    E+A +W+LFHDTDEY+YP DTS+ + DAL+KH  TCCA+V R+QYGS GH EMPRGL++++FL H +      N   KV+VNL P+E +   V PPL+SMH AEGC C   K     ++ INHYLGS GDY++R  RYW 
Sbjct:    2 KVAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLAKVMVNLDPSEPEVGVVEPPLRSMHNAEGCDCAGSKFGGVSDLRINHYLGSIGDYMDRTTRYWE 227
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BLAST of mRNA_E-fasciculatus_F_contig12060.1609.1 vs. uniprot
Match: A0A6H5KFX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFX9_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 1.460e-86
Identity = 144/281 (51.25%), Postives = 180/281 (64.06%), Query Frame = 1 
Query:  118 WKGGGGPFGLDGDWRDALQEEGGDGSEDGLRGEACMTHEKRKEV----------------AVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDSTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFL--AHQNDSSHHANPKVVVNLTPTES--DPVAPPLKSMHKAEGCGCLDLK-REVLINHYLGSRGDYLERVHRYWS 897
            W G GG FGL  DWR+A    G  G E  +RG++CM   K+++V                A C+RTKD+GRFLPEW+A+HYAIGVDE++IYDD+S D T E+L+PFV+AGIV YI +       QM PLN CL  ++ R+  D E AP WLLFHDTDEYV P DTSVT+  AL KH +TCC  V R+ YG+GGH EMP+GL+++ FL  AH +D   +  PKV VNL  T+         LKSMH  +GC C  +   E+ INHYLGSRGDYL +  RYW 
Sbjct:   79 WTGAGGKFGLTSDWREAAMMPGARGGEATMRGDSCMGDAKQRQVREILERRAKTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDDTVEILQPFVDAGIVTYILERTGHWENQMTPLNLCLEEHMVRRLGDNE-APRWLLFHDTDEYVVPVDTSVTIAQALDKHSATCCVRVPRVTYGAGGHDEMPQGLLLEVFLQHAHLHDFKSNRLPKVAVNLDTTQPLLGQARSRLKSMHNGQGCQCDVIPVDEIRINHYLGSRGDYLGKTKRYWQ 358
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BLAST of mRNA_E-fasciculatus_F_contig12060.1609.1 vs. uniprot
Match: A0A6H5JE36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE36_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.750e-35
Identity = 78/183 (42.62%), Postives = 113/183 (61.75%), Query Frame = 1 
Query:  241 KEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDSTSE----VLKPFVNAGIVRYIFDMI-PRRA------AQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTS-VTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHAN--PKVVVNLT 747
            ++V  C RTKD GR+LPEWVA+H+A+GVDE++I+DD+SVD T E    VL+PFV AGIV++    I PR A      A M PL  C+  Y          AP W++  DTDEY++  +   + L +AL+   +TCC  V  +Q+G+ G  + PRGL++++FL H + +S   N  PKV+  L+
Sbjct:  249 EQVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDTREARIFVLEPFVRAGIVKFQRRHIDPRNATSTPPSAAMPPLTECVESYRGMHDWGDRLAPRWVVLLDTDEYLWAREAGKIGLPEALEARSTTCCLQVSTVQHGTSGFSKSPRGLLLENFLTHADPTSPELNGPPKVLYCLS 431
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BLAST of mRNA_E-fasciculatus_F_contig12060.1609.1 vs. uniprot
Match: A0A6H5JP81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP81_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.100e-27
Identity = 57/82 (69.51%), Postives = 62/82 (75.61%), Query Frame = 1 
Query:  652 QEMPRGLVMDSFLAHQNDSSHHANPKVVVNLTPTESDPVAPPLKSMHKAEGCGCLDLKREVLINHYLGSRGDYLERVHRYWS 897
            Q++  G     + A Q     +    VVVNLTPTESDPVAPPLKSMHKAEGC CLDLK+ VLINHYLGSRGDYLERVHRYWS
Sbjct:  139 QQLEPGTPRTKYGARQTLEIKNMKKMVVVNLTPTESDPVAPPLKSMHKAEGCECLDLKQGVLINHYLGSRGDYLERVHRYWS 220
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BLAST of mRNA_E-fasciculatus_F_contig12060.1609.1 vs. uniprot
Match: A0A356L7D7_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A356L7D7_9PROT)

HSP 1 Score: 95.1 bits (235), Expect = 6.480e-19
Identity = 60/166 (36.14%), Postives = 83/166 (50.00%), Query Frame = 1 
Query:  244 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDSTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHANPKVVVN 741
            E+AV    KD G +L EW+ FH   GV++  +YD+ S D+T+E+LKP++  GIV Y +   P RA Q    N      +NR KNDA     W+   D DE+V P                    V+  + YGS GH   P GLV+++F  H  D +  A  K +VN
Sbjct:   63 ELAVLAVMKDEGAYLKEWLDFHILAGVEKFYLYDNESTDNTTEILKPYIERGIVEYKY--WPGRAQQ----NPVYWDGLNRHKNDAR----WIAVIDLDEFVVPVQNKTITEFLHTLPRGARELVMTWVMYGSSGHVHKPDGLVIENFRCHA-DRTRPAGCKSIVN 217
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12060.1609.1 vs. uniprot
Match: A0A520BS46_9SPHI (Glycosyltransferase family 92 protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A520BS46_9SPHI)

HSP 1 Score: 94.4 bits (233), Expect = 8.520e-19
Identity = 51/151 (33.77%), Postives = 81/151 (53.64%), Query Frame = 1 
Query:  247 VAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDSTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCL-RHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAH 696
            +A+C   K+ G +  EW+ +H  +GV++  IYD+ S D+T E+L P+V  G+V YIF   P    Q+   + CL +H ++ +         WL   D DE++ P    +T+ D LK HE      +  + YGSGG +E  +G +M+ F  H
Sbjct:   52 LAICAIAKNEGPYFEEWITWHQKLGVEKFYIYDNESTDNTREILAPYVETGLVDYIF--WPGLKQQLITYDDCLEKHRLDTR---------WLAVIDMDEFIKPIQ-DLTITDFLKNHEDVPAVEINWLVYGSGGAKEKEQGSIMERFKKH 190
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BLAST of mRNA_E-fasciculatus_F_contig12060.1609.1 vs. uniprot
Match: R5CAV1_9BACT (Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1058 TaxID=1262918 RepID=R5CAV1_9BACT)

HSP 1 Score: 92.0 bits (227), Expect = 5.650e-18
Identity = 57/177 (32.20%), Postives = 90/177 (50.85%), Query Frame = 1 
Query:  223 MTHEKRKE---VAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDSTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCL-RHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHANPKVVVN 741
            + H+K +    +AVC   K+ G +  EWV +H+  GVD+  IYD+ S D T EVLKP++ +G+V YI+   P    Q+   + CL RH  + +         W+ F D DE++ P      + + L + ES     +  + YGSGG ++  +G +M+ F        HHA P   +N
Sbjct:   40 LKHDKTQPKYYLAVCAIAKNEGPYFKEWVDWHHEQGVDKFYIYDNESTDCTKEVLKPYIESGLVEYIY--YPGYRRQLAAYDDCLERHRFDSR---------WIAFIDLDEFIVPVKDH-NIPEFLHRFESFPAVEINWLIYGSGGAKKKVQGTMMERF-------KHHATPSHYLN 197
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BLAST of mRNA_E-fasciculatus_F_contig12060.1609.1 vs. uniprot
Match: A0A6L5YK66_9FIRM (Glycosyltransferase family 2 protein n=1 Tax=Waltera intestinalis TaxID=2606635 RepID=A0A6L5YK66_9FIRM)

HSP 1 Score: 88.6 bits (218), Expect = 1.730e-16
Identity = 45/160 (28.12%), Postives = 86/160 (53.75%), Query Frame = 1 
Query:  244 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDSTSEVLKPFVNAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDAL----KKHESTCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSS 711
            ++A+    KD G ++ EW+ +H   GVD+  ++D+ S D+   +LK +++ GIV YI+  +P RA Q++       ++   KK  A+    ++++ D DE++   D S  LY+ +    + + +     V    YGS G++  P GLVM++++    D +
Sbjct:   65 KLAIAAIMKDEGLYIEEWLCYHIIRGVDKFFLFDNGSSDNIKNILKKYIDVGIVEYIY--LPGRAKQLDA------YFAATKK--AKKTVKYIMYLDCDEFITTADASADLYEVIHSVFEAYTNAAAVAVNWYVYGSNGYKTKPEGLVMENYVYRAKDEA 214
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12060.1609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLX6_ECTSI2.690e-18987.00Glycosyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KB75_9PHAE2.630e-9953.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYE9_ECTSI2.890e-9057.96Glycosyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KFX9_9PHAE1.460e-8651.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JE36_9PHAE2.750e-3542.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP81_9PHAE1.100e-2769.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A356L7D7_9PROT6.480e-1936.14Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]
A0A520BS46_9SPHI8.520e-1933.77Glycosyltransferase family 92 protein n=2 Tax=Bact... [more]
R5CAV1_9BACT5.650e-1832.20Uncharacterized protein n=1 Tax=Prevotella sp. CAG... [more]
A0A6L5YK66_9FIRM1.730e-1628.13Glycosyltransferase family 2 protein n=1 Tax=Walte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12060contigE-fasciculatus_F_contig12060:38..3610 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score86.7
Seed ortholog evalue2.1e-14
Seed eggNOG ortholog1002367.HMPREF0673_01304
EggNOG free text desc.Glycosyltransferase family 92
EggNOG OGs2G2GR@200643,4NW1M@976,COG0463@1,COG0463@2
COG Functional cat.M
Best tax levelBacteroidia
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-22_000100.1
Exons5
Model size897
Cds size897
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12060.1609.1prot_E-fasciculatus_F_contig12060.1609.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12060 38..3610 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927714.8822238-CDS-E-fasciculatus_F_contig12060:37..2831622927714.8822238-CDS-E-fasciculatus_F_contig12060:37..283Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12060 38..283 +
1695995663.1835966-CDS-E-fasciculatus_F_contig12060:37..2831695995663.1835966-CDS-E-fasciculatus_F_contig12060:37..283Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12060 38..283 +
1622927714.8972602-CDS-E-fasciculatus_F_contig12060:1074..12591622927714.8972602-CDS-E-fasciculatus_F_contig12060:1074..1259Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12060 1075..1259 +
1695995663.2014604-CDS-E-fasciculatus_F_contig12060:1074..12591695995663.2014604-CDS-E-fasciculatus_F_contig12060:1074..1259Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12060 1075..1259 +
1622927714.911029-CDS-E-fasciculatus_F_contig12060:1907..20941622927714.911029-CDS-E-fasciculatus_F_contig12060:1907..2094Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12060 1908..2094 +
1695995663.210882-CDS-E-fasciculatus_F_contig12060:1907..20941695995663.210882-CDS-E-fasciculatus_F_contig12060:1907..2094Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12060 1908..2094 +
1622927714.9256825-CDS-E-fasciculatus_F_contig12060:2715..28261622927714.9256825-CDS-E-fasciculatus_F_contig12060:2715..2826Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12060 2716..2826 +
1695995663.221562-CDS-E-fasciculatus_F_contig12060:2715..28261695995663.221562-CDS-E-fasciculatus_F_contig12060:2715..2826Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12060 2716..2826 +
1622927714.9402921-CDS-E-fasciculatus_F_contig12060:3442..36101622927714.9402921-CDS-E-fasciculatus_F_contig12060:3442..3610Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12060 3443..3610 +
1695995663.2296135-CDS-E-fasciculatus_F_contig12060:3442..36101695995663.2296135-CDS-E-fasciculatus_F_contig12060:3442..3610Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12060 3443..3610 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12060.1609.1

>prot_E-fasciculatus_F_contig12060.1609.1 ID=prot_E-fasciculatus_F_contig12060.1609.1|Name=mRNA_E-fasciculatus_F_contig12060.1609.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=299bp
LEVGEEPTRSPQSKDEKKGDDSTEPPEKKSNDSTEPPESWKGGGGPFGLD
GDWRDALQEEGGDGSEDGLRGEACMTHEKRKEVAVCLRTKDYGRFLPEWV
AFHYAIGVDEVSIYDDNSVDSTSEVLKPFVNAGIVRYIFDMIPRRAAQME
PLNRCLRHYINRKKNDAENAPSWLLFHDTDEYVYPGDTSVTLYDALKKHE
STCCAVVRRIQYGSGGHQEMPRGLVMDSFLAHQNDSSHHANPKVVVNLTP
TESDPVAPPLKSMHKAEGCGCLDLKREVLINHYLGSRGDYLERVHRYWS
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mRNA from alignment at E-fasciculatus_F_contig12060:38..3610+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12060.1609.1 ID=mRNA_E-fasciculatus_F_contig12060.1609.1|Name=mRNA_E-fasciculatus_F_contig12060.1609.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3573bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12060:38..3610+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCGAGGTTGGAGAGGAACCGACGCGGTCGCCGCAATCAAAAGACGAGAA
GAAGGGCGACGATTCCACGGAACCCCCCGAGAAGAAGAGCAATGATTCTA
CGGAGCCCCCCGAATCCTGGAAGGGGGGGGGGGGTCCTTTCGGACTCGAC
GGTGATTGGCGAGACGCGCTGCAGGAGGAGGGGGGGGACGGGAGTGAGGA
CGGGCTGCGAGGGGAGGCTTGCATGACGCACGAGAAGCGGAAGGAAGTGC
GAGACATTCTGGAGAAAAGGAAGATCGATCCACCGAGACAGAAGGTATGT
TTCTTCTACATCACATCGCTCTTCTGGCCCTTGGATAGCGCCCGCACTTC
CAGAACTCCGTGCACTCAACATTGTATCGAACTTAAGGACTTGAACGTTA
TTGTGTGCTCAACGTTGTCGAACATGAGAACTTGAGCATCATTTATTTGT
GTGCCCACTTAAAAACCCCTACACTAACACCTATATATATATAATGTATA
TATATAGTCTATAGCCCTAGCAACTAAATGAAATGAGAACCCCAGCCTCG
GCCAAAACTACTGTCTGTCGAGGTTGTAAGGGCGGTTGCTATCTGTGTGC
TGCAGGACTTGGTTGGACAATCAAGAGAGAGAGATCGTTCGAACGACAGG
GTAGGAGGAGCATATGACACGGTCGAGGGCAGGGAACCACTAACCAGCAA
GCATGGCTCTCATCTTGGTGTTGCTTCTGCTGTTAACAGTTGCTATTGTG
CTATTGCTATTGGACGCCGTCAACGGGTAGCTGAACCCAATAACCAATAA
GGACCCTACCCTGAAGGGACACGTTCAAGCGTTATACATTCATGCTGCTG
TATTTTTTTTCTCACAACCTGCTGCAACGAAAAACATGTTTTTTTTTTTC
TTGAAAAGTGACAACCAACATCATGCTGTTCTTGCCTCACTGTTTGTTTT
TCTAACAACACGCCAGCGAAACACATGTTTGTTTTTGTCGAAACGAATTT
GTTTTTTTGTTCTGCCCCGCCTATCCGTGGAACGAAGGTGGCTGTATGCC
TCCGCACCAAGGACTACGGAAGGTTCCTCCCCGAGTGGGTGGCCTTCCAC
TACGCCATTGGCGTGGACGAAGTCTCAATCTACGACGACAACAGCGTGGA
TAGCACGTCGGAGGTGCTCAAGCCTTTCGTAAACGCCGGCATCGTTCGGT
ACATCTTCGACATGATCCCTAGGTGAGGATAGACAGCTCAGCTGTTCTAG
GTGAGGATAGACAGCTCAGCTGTTCTGGGCATTTCTCACGTCCACGTCCA
CGTACACATGTATTTCTTGCAAGTTGTTGCCAACCACCCTTTGCGGGGGT
AGTTCGCCTGTACAGGTGCAACCTGAGGGATTACAGATTACAGAACGCGG
CACCCCTTAAGAACATGTTATTTTGGCCGAGGCTCGGTACGCCCTCGGCG
ACTATATAGTTTTAGTACTGTAGTAGGAGTAGGTTTTAGTGCAGGCTCTT
GACTGAGAACACCTGCCTGTTCTGCTGTTCTTTATGGCCAAGTTATTTTT
ATTTTTTCGACTCAAGTTCTTAAGGGTTGGCGCGTTCTCTATTGGACAAT
ATTCAGGGTGGCGGTGTCCGCAATCATGAGGTTGGGTGTGTGTGTGTGTG
TGTGTGTGTGTTTTTTGTCGGGGGTGTACTCATAGTCGTGCATGCCGTAG
TCGTTAAACCGTTGACCTCGCACTNNNNNNNNNNGCATCCCTACAAAGCC
TGGACGGAGCACGCCGGGTTCTCACCGGACCAGGCTCTCACATCACCATA
TGATATTTTGTACAGTTTTGGAGACGCAATAAAATATCCGGTGTATGCTG
CTGCTTGTTGTGTCGGGCAGGCGGGCCGCCCAGATGGAGCCTCTGAACCG
CTGCTTGCGGCACTACATCAACCGAAAAAAGAACGACGCCGAGAACGCTC
CCAGCTGGCTGCTGTTCCATGACACCGACGAGTACGTCTACCCAGGGGAC
ACCAGCGTCACCCTCTACGACGCCCTCAAGAAGCATGAGTCTACCTGCTG
TGCCGTGGTGTGTTGGCAGTACGGGTAGGGTGGAGTAGCTTCTGCTGCCG
CAGTTGTTAATTGTTGATGCTGCTGCTGCTGCTGCTGCTGCTACTGCTTT
CTGTTGTATCCGGTGTTGTTTTCACGCTAAGAGGGCCACGTCCCTGTTTA
CCTCTTCCATCCGGAGGTACTGGGTAGAGAGATCGGAACGGTTTTTACGC
TTTGAATATCAAGACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACACTTCACCAGTGTCCACGCTACCGCGCTTTCGCTGCTGGT
CGTTGATGGTATCGAGAGCAGGTTAGGCTTAACGAAACGCTTCCTTCGGC
TTGCTGTGATAGGCCATTCGTACATAGACGCCGTTTTTTTCGCTTCTTGT
GGGCACCTGACAGGTTCTCGGGCGTTGTTTCATGCGTATCGTGATGGCTT
AGGTATTGTATGCGCATCATATTGCAGGTGACAGGTGCTAAGTTACGCGT
TGTTTTTTTCGCATCATATTGGCACATGACACGTGCTTAGTTAGGCGTTG
TTTTATGCACCATCGTATTTGGCACGTGACGGGCTCAGACGTTGTTGCTT
TTGTTCGCACCGTATTGGCACCTGACAGGTGCGCCGCATCCAGTACGGCT
CGGGAGGGCACCAAGAGATGCCCAGGGGGTTGGTGATGGACAGCTTCCTG
GCTCACCAGAATGACTCTTCGCATCACGCCAATCCCAAGGTAGGCATGCA
TGCAATCTACGAGGAAAGTTAGTCCTCGAAAGTTCGCGCGGGCTTTTGAC
AGTGTACTGTTGTTGGTGGTGGTGGTGGTCGTGTTGAATGCATGGCGTTG
TACTAAAATTGTTGGTGGGTGGGTGGGCGTTGTGACGGCGTTTAGTATGT
AGACTATTCTGGTGTTGTTGTCGTCCTTGTTTGGTGGTGGTGTTACTCGT
TCTACCGCTCGTCGTCGTGTGTCGCATGAAGCATGCAACCCTGTGCTGCA
CCCTACCCAAACGCTAACCCGGGTGTACCCCCTCCTGACCCCAAAGAACG
GCGAGCGTTCTGTCCTTCCTCGTTATCCGTAACATCTATGCATATCATGT
GGAATTGCTCGGTTTGCTGGGTCGATGGGTCAGGTTATGGTGAAATTATT
CGCCGGATACACGCCACTGTACCACGTTACATTTATTTCTGTTATGCCGC
GGCGAATGCGAAGAACGGTTTTTAAACACAACCGGCACTGATTATCAATT
TTTTATGAAGTTCTCAAGCAAGTTCAACGTGGATCCGAGGTAGGAAGGAC
GAGCACCAACGTCGCTCCCGTTTTGCTTCTTCTTCCTTCCGTGGTGTTGT
GCCAGGTCGTGGTTAATCTGACTCCTACCGAATCGGATCCAGTAGCGCCT
CCGCTCAAGAGCATGCACAAGGCGGAGGGGTGCGGATGCCTAGACTTGAA
GCGGGAAGTGCTCATCAACCATTACCTGGGATCCCGGGGAGACTACCTGG
AAAGGGTACATCGGTACTGGTCG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12060:38..3610+

>mRNA_E-fasciculatus_F_contig12060.1609.1 ID=mRNA_E-fasciculatus_F_contig12060.1609.1|Name=mRNA_E-fasciculatus_F_contig12060.1609.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1794bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12060:38..3610+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCGAGGTTGGAGAGGAACCGACGCGGTCGCCGCAATCAAAAGACGAGAA
GAAGGGCGACGATTCCACGGAACCCCCCGAGAAGAAGAGCAATGATTCTA
CGGAGCCCCCCGAATCCTGGAAGGGGGGGGGGGGTCCTTTCGGACTCGAC
GGTGATTGGCGAGACGCGCTGCAGGAGGAGGGGGGGGACGGGAGTGAGGA
CGGGCTGCGAGGGGAGGCTTGCATGACGCACGAGAAGCGGAAGGAACTCG
AGGTTGGAGAGGAACCGACGCGGTCGCCGCAATCAAAAGACGAGAAGAAG
GGCGACGATTCCACGGAACCCCCCGAGAAGAAGAGCAATGATTCTACGGA
GCCCCCCGAATCCTGGAAGGGGGGGGGGGGTCCTTTCGGACTCGACGGTG
ATTGGCGAGACGCGCTGCAGGAGGAGGGGGGGGACGGGAGTGAGGACGGG
CTGCGAGGGGAGGCTTGCATGACGCACGAGAAGCGGAAGGAAGTGGCTGT
ATGCCTCCGCACCAAGGACTACGGAAGGTTCCTCCCCGAGTGGGTGGCCT
TCCACTACGCCATTGGCGTGGACGAAGTCTCAATCTACGACGACAACAGC
GTGGATAGCACGTCGGAGGTGCTCAAGCCTTTCGTAAACGCCGGCATCGT
TCGGTACATCTTCGACATGATCCCTAGGTGGCTGTATGCCTCCGCACCAA
GGACTACGGAAGGTTCCTCCCCGAGTGGGTGGCCTTCCACTACGCCATTG
GCGTGGACGAAGTCTCAATCTACGACGACAACAGCGTGGATAGCACGTCG
GAGGTGCTCAAGCCTTTCGTAAACGCCGGCATCGTTCGGTACATCTTCGA
CATGATCCCTAGGCGGGCCGCCCAGATGGAGCCTCTGAACCGCTGCTTGC
GGCACTACATCAACCGAAAAAAGAACGACGCCGAGAACGCTCCCAGCTGG
CTGCTGTTCCATGACACCGACGAGTACGTCTACCCAGGGGACACCAGCGT
CACCCTCTACGACGCCCTCAAGAAGCATGAGTCTACCTGCTGTGCCGTGG
CGGGCCGCCCAGATGGAGCCTCTGAACCGCTGCTTGCGGCACTACATCAA
CCGAAAAAAGAACGACGCCGAGAACGCTCCCAGCTGGCTGCTGTTCCATG
ACACCGACGAGTACGTCTACCCAGGGGACACCAGCGTCACCCTCTACGAC
GCCCTCAAGAAGCATGAGTCTACCTGCTGTGCCGTGGTGCGCCGCATCCA
GTACGGCTCGGGAGGGCACCAAGAGATGCCCAGGGGGTTGGTGATGGACA
GCTTCCTGGCTCACCAGAATGACTCTTCGCATCACGCCAATCCCAAGGTG
CGCCGCATCCAGTACGGCTCGGGAGGGCACCAAGAGATGCCCAGGGGGTT
GGTGATGGACAGCTTCCTGGCTCACCAGAATGACTCTTCGCATCACGCCA
ATCCCAAGGTCGTGGTTAATCTGACTCCTACCGAATCGGATCCAGTAGCG
CCTCCGCTCAAGAGCATGCACAAGGCGGAGGGGTGCGGATGCCTAGACTT
GAAGCGGGAAGTGCTCATCAACCATTACCTGGGATCCCGGGGAGACTACC
TGGAAAGGGTACATCGGTACTGGTCGGTCGTGGTTAATCTGACTCCTACC
GAATCGGATCCAGTAGCGCCTCCGCTCAAGAGCATGCACAAGGCGGAGGG
GTGCGGATGCCTAGACTTGAAGCGGGAAGTGCTCATCAACCATTACCTGG
GATCCCGGGGAGACTACCTGGAAAGGGTACATCGGTACTGGTCG
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