prot_E-fasciculatus_F_contig1206.1608.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1206.1608.1
Unique Nameprot_E-fasciculatus_F_contig1206.1608.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length120
Homology
BLAST of mRNA_E-fasciculatus_F_contig1206.1608.1 vs. uniprot
Match: D8LQC0_ECTSI (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC0_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 2.010e-76
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
Query:    1 MISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKR 119
            MISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKR
Sbjct:  314 MISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKR 432          
BLAST of mRNA_E-fasciculatus_F_contig1206.1608.1 vs. uniprot
Match: A0A6H5J9L3_9PHAE (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L3_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 1.020e-66
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
Query:   25 NFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKR 119
            NFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKR
Sbjct:    2 NFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKR 96          
BLAST of mRNA_E-fasciculatus_F_contig1206.1608.1 vs. uniprot
Match: A0A7R9U2R1_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2R1_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.700e-53
Identity = 75/119 (63.03%), Postives = 96/119 (80.67%), Query Frame = 0
Query:    1 MISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKR 119
            MISYM+DG+G+LI+SR VVS+D+E+FEYTPKPS+PG F +FNE +EE ++RRF  H  E RPQI VTYNGDFFDWPF+++RAK YG+D+  E+G+ LQ   E+RGRC  H+DA  WV R
Sbjct:   64 MISYMIDGEGFLIVSRSVVSKDIEDFEYTPKPSYPGVFTVFNEASEEGLLRRFLDHCREARPQIYVTYNGDFFDWPFIEQRAKVYGMDIRSELGIELQRE-EFRGRCAVHLDAFAWVNR 181          
BLAST of mRNA_E-fasciculatus_F_contig1206.1608.1 vs. uniprot
Match: A0A7S2UHD4_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHD4_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.230e-52
Identity = 81/127 (63.78%), Postives = 98/127 (77.17%), Query Frame = 0
Query:    1 MISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGL--------QANGEYRGRCVAHMDAIYWVKR 119
            MISYMVDGQG+LI+SR+VV +DV +FEYTPKPS+PGPFHIFNE  EE +IRRFF     LRPQI+VTYNGDFFDWPF+++RA  YGLD+ KE+G+             GEYRGRC  H+DA +WV+R
Sbjct:   88 MISYMVDGQGFLILSRDVVGQDVMDFEYTPKPSYPGPFHIFNELTEEDLIRRFFSEYQRLRPQIVVTYNGDFFDWPFLEQRAAMYGLDIGKELGIERVGGNGKENSGGGEYRGRCCVHLDAFHWVQR 214          
BLAST of mRNA_E-fasciculatus_F_contig1206.1608.1 vs. uniprot
Match: A0A2R5GVQ4_9STRA (DNA-directed DNA polymerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVQ4_9STRA)

HSP 1 Score: 184 bits (468), Expect = 9.850e-52
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 0
Query:    1 MISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANG-EYRGRCVAHMDAIYWVKR 119
            MISYM DGQGYLII+REVV+ED+E+FEYTPKP +PGPF +FNE +EE+ +R+FF+H  ELRP + VTYNGDFFDWPF+++RA  Y +D+  E+GVG    G EYRGRC  HMD +YWVKR
Sbjct:  300 MISYMFDGQGYLIINREVVTEDIEDFEYTPKPEYPGPFEVFNEADEESTLRKFFEHCRELRPNVWVTYNGDFFDWPFIEKRAATYDMDLRTEVGVGPNKEGTEYRGRCSVHMDCLYWVKR 419          
BLAST of mRNA_E-fasciculatus_F_contig1206.1608.1 vs. uniprot
Match: A0A7S2FZE0_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZE0_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.500e-50
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = 0
Query:    6 VDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKR 119
            V+GQGYLII R +VS+D+++FEYTPKPSFPGPF IFNE NEE ++R+F  H+ ELRPQI VTYNGDFFDWPF+++R + YG++M KEIG+       YRGRC AH+D   WV R
Sbjct:    1 VNGQGYLIIHRGIVSKDIDDFEYTPKPSFPGPFKIFNEANEEQLLRKFLSHIQELRPQIFVTYNGDFFDWPFLEKRLQKYGINMGKEIGIYKNREDVYRGRCSAHLDCFAWVNR 114          
BLAST of mRNA_E-fasciculatus_F_contig1206.1608.1 vs. uniprot
Match: A0A067CV87_SAPPC (DNA polymerase epsilon catalytic subunit n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CV87_SAPPC)

HSP 1 Score: 179 bits (453), Expect = 1.030e-49
Identity = 78/119 (65.55%), Postives = 92/119 (77.31%), Query Frame = 0
Query:    1 MISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKR 119
            MISYMVD QGYLI++RE VS+DV++FEYTP   + GPF  FN PNEEA+++RFF HV EL P I VTYNGDFFDWPFV+ RA  +GL+M  EIG+    NGEYRG+C  HMDA  WVKR
Sbjct:  277 MISYMVDRQGYLIVNREFVSQDVDDFEYTPTKEYDGPFECFNAPNEEALLKRFFSHVTELNPHIFVTYNGDFFDWPFVETRAAAHGLNMAAEIGISCDRNGEYRGKCAVHMDAYCWVKR 395          
BLAST of mRNA_E-fasciculatus_F_contig1206.1608.1 vs. uniprot
Match: A0A7S2SRI6_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SRI6_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.210e-49
Identity = 75/119 (63.03%), Postives = 90/119 (75.63%), Query Frame = 0
Query:    1 MISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKR 119
            MISY+ DGQGYLII+RE VS D+ +FEYTPKP +PGPF +FNE +E A + RFF H  ELRP I VTYNGDFFDWPFV+ RAK YG++M  EIGV   ++G Y G C  HMD  +WV+R
Sbjct:  126 MISYVFDGQGYLIINREHVSADISDFEYTPKPEYPGPFEVFNEADERATLERFFTHCKELRPNIWVTYNGDFFDWPFVETRAKVYGMNMHTEIGVRETSSGVYTGSCAVHMDCFHWVQR 244          
BLAST of mRNA_E-fasciculatus_F_contig1206.1608.1 vs. uniprot
Match: W7TVX1_9STRA (DNA-directed DNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVX1_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.410e-49
Identity = 77/119 (64.71%), Postives = 98/119 (82.35%), Query Frame = 0
Query:    1 MISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQANGEYRGRCVAHMDAIYWVKR 119
            MISYMVDGQGYL+I+REVV ED+++FEYTPKP++ GPF + N P+EEAV+R F +HV ELRPQI VTYNGD+FDWPF++ R + YG++M  EIGV  ++ GEYRGR   H+DA +WVKR
Sbjct:  308 MISYMVDGQGYLLINREVVGEDIQDFEYTPKPAYAGPFTVVNVPDEEAVLREFIRHVQELRPQIFVTYNGDYFDWPFMETRMEAYGIEMSAEIGVA-ESQGEYRGRAAVHLDAFHWVKR 425          
BLAST of mRNA_E-fasciculatus_F_contig1206.1608.1 vs. uniprot
Match: A0A3M6VP32_9STRA (DNA polymerase epsilon catalytic subunit n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP32_9STRA)

HSP 1 Score: 177 bits (449), Expect = 3.570e-49
Identity = 77/120 (64.17%), Postives = 99/120 (82.50%), Query Frame = 0
Query:    1 MISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVIRRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGL-QANGEYRGRCVAHMDAIYWVKR 119
            MISYM+D QGYLI++R+ VSED+++FEYTPK ++PGPF +FNE NEE +++RFF+HV E +P I VTYNGDFFDWPF++ RA+ YG++M +EIGV L +  GEYRGRC  HMDA  WVKR
Sbjct:  338 MISYMIDKQGYLIVNRDFVSEDIQDFEYTPKVAYPGPFIVFNEENEEKLLKRFFEHVIEEQPHIFVTYNGDFFDWPFIETRAQVYGINMAREIGVSLDERTGEYRGRCSVHMDAFCWVKR 457          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1206.1608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQC0_ECTSI2.010e-76100.00DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
A0A6H5J9L3_9PHAE1.020e-66100.00DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
A0A7R9U2R1_9STRA1.700e-5363.03DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A7S2UHD4_9STRA1.230e-5263.78DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A2R5GVQ4_9STRA9.850e-5265.83DNA-directed DNA polymerase n=1 Tax=Hondaea fermen... [more]
A0A7S2FZE0_9STRA2.500e-5063.16DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A067CV87_SAPPC1.030e-4965.55DNA polymerase epsilon catalytic subunit n=2 Tax=S... [more]
A0A7S2SRI6_9STRA1.210e-4963.03DNA polymerase epsilon catalytic subunit (Fragment... [more]
W7TVX1_9STRA1.410e-4964.71DNA-directed DNA polymerase n=2 Tax=Monodopsidacea... [more]
A0A3M6VP32_9STRA3.570e-4964.17DNA polymerase epsilon catalytic subunit n=2 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..119
e-value: 2.0E-26
score: 94.9
IPR006133DNA-directed DNA polymerase, family B, exonuclease domainPFAMPF03104DNA_pol_B_exo1coord: 1..119
e-value: 7.7E-32
score: 110.7
NoneNo IPR availablePANTHERPTHR10670:SF0DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 1..119
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 1..119
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1206contigE-fasciculatus_F_contig1206:16739..18210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1206.1608.1mRNA_E-fasciculatus_F_contig1206.1608.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1206 16739..18231 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1206.1608.1 ID=prot_E-fasciculatus_F_contig1206.1608.1|Name=mRNA_E-fasciculatus_F_contig1206.1608.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=120bp
MISYMVDGQGYLIISREVVSEDVENFEYTPKPSFPGPFHIFNEPNEEAVI
RRFFKHVAELRPQIIVTYNGDFFDWPFVDERAKGYGLDMEKEIGVGLQAN
GEYRGRCVAHMDAIYWVKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR029703POL2
IPR006133DNA-dir_DNA_pol_B_exonuc
IPR036397RNaseH_sf