prot_E-fasciculatus_F_contig12047.1595.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12047.1595.1
Unique Nameprot_E-fasciculatus_F_contig12047.1595.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length111
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12047.1595.1 vs. uniprot
Match: A0A6H5KLB1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLB1_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.760e-8
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0 
Query:    1 MIPNVSGDSGEDSLSNDGKRKTEMAKERNRLHAR 34
            +IP VSGDSGEDS+SND KRKTEMAKERNRLHAR
Sbjct:   33 IIPTVSGDSGEDSVSNDCKRKTEMAKERNRLHAR 66
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12047.1595.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLB1_9PHAE1.760e-888.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..111
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12047contigE-fasciculatus_F_contig12047:3777..4109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12047.1595.1mRNA_E-fasciculatus_F_contig12047.1595.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12047 3777..4109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12047.1595.1 ID=prot_E-fasciculatus_F_contig12047.1595.1|Name=mRNA_E-fasciculatus_F_contig12047.1595.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=111bp
MIPNVSGDSGEDSLSNDGKRKTEMAKERNRLHARCGVLVLYCIGTGCLLF
LFSFDLVSCVLCRPRPRPRYWLTHEETPVFCLLEVSFWWLSRPWQALPLF
FSADNITFDCV
back to top