mRNA_E-fasciculatus_F_contig12032.1583.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12032.1583.1 vs. uniprot
Match: D8LNX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX0_ECTSI) HSP 1 Score: 191 bits (486), Expect = 2.920e-58 Identity = 106/144 (73.61%), Postives = 112/144 (77.78%), Query Frame = 1
Query: 1 ILDKMKELRPIVETGYENILLVRLLIEESPCSHADPPVFSLARVCQQR------WPRT-IDDGWISLVAVLDALALRYGLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALLEHAG 411
ILDKMKELRPIVETGYENILLVRLLIEES S + + + + R +P + D W DALALRY LSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALLEHAG
Sbjct: 68 ILDKMKELRPIVETGYENILLVRLLIEESRKSRGEQRLSTKSSSTMPRLGLPVLYPSEGLFDSWGP--EARDALALRYDLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALLEHAG 209
BLAST of mRNA_E-fasciculatus_F_contig12032.1583.1 vs. uniprot
Match: A0A6H5KET7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KET7_9PHAE) HSP 1 Score: 184 bits (468), Expect = 1.360e-55 Identity = 101/137 (73.72%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 1 ILDKMKELRPIVETGYENILLVRLLIEESPCSHADPPVFSLARVCQQRWPRTIDDGWISLVAVLDALALRYGLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALLEHAG 411
ILDKMKELRPIVETGYENILLVRLLIEE PV + W DALALRYGL REELVDAFGSARDEWME DFQGWLGANKFYEGIPEAISAC GEVYVITTKQTRFASALLEHAG
Sbjct: 83 ILDKMKELRPIVETGYENILLVRLLIEE----RLGLPVLYPSEGLLDSWGPE----------ARDALALRYGLGREELVDAFGSARDEWMEVDFQGWLGANKFYEGIPEAISACTGEVYVITTKQTRFASALLEHAG 205
BLAST of mRNA_E-fasciculatus_F_contig12032.1583.1 vs. uniprot
Match: A0A835YJR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJR6_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.040e-29 Identity = 65/142 (45.77%), Postives = 88/142 (61.97%), Query Frame = 1
Query: 1 ILDKMKELRPIVETGYENILLVRLLIEESPCSHADPPVFSLARVCQQRWPRTIDDGWISL---VAVLDALALRYGLSREELVDAFGSARDEWMEADFQGWLGANKFYE--GIPEAISACEGEVYVITTKQTRFASALLEHAG 411
++DKM++LRP+VETGYENILL RLL+EE + ++ R + G I+ + D L +YG +++ELV AFG RDEW+ D + WL AN FYE G+ +A + VY+ITTKQTRFA ALL+HAG
Sbjct: 62 LMDKMRKLRPVVETGYENILLTRLLLEEYRMAETSG---------KETGTRPLTVGEIAANWGEELKDTLMRKYGYTQDELVHAFGDTRDEWIARDEESWLEANSFYERLGVRDAARYSKANVYIITTKQTRFAEALLKHAG 194
BLAST of mRNA_E-fasciculatus_F_contig12032.1583.1 vs. uniprot
Match: A0A8J5LBA9_ZINOF (Uncharacterized protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LBA9_ZINOF) HSP 1 Score: 116 bits (291), Expect = 2.400e-29 Identity = 63/138 (45.65%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 1 ILDKMKELRPIVETGYENILLVRLLIEESPCSHADPPVFSLARVCQQRWPRTIDDGWISLVAVLDALALRYGLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALL-EHAG 411
I+D+M LRP+VETGYEN+LLVRLL+E P + V I + W+ L V+ +G R+ LVD FG RDEWME D GW+GAN+FY G+ +A+ ++Y++TTKQ RFA ALL E AG
Sbjct: 48 IIDQMHILRPVVETGYENLLLVRLLVE------LKAPSARKSSVADGLTVEAILENWMKLKPVIME---EWGEERDSLVDLFGRVRDEWMENDLSGWIGANRFYPGVADALRFASSQLYIVTTKQARFADALLRELAG 176
BLAST of mRNA_E-fasciculatus_F_contig12032.1583.1 vs. uniprot
Match: UPI000CED3D9F (uncharacterized protein LOC21395617 n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED3D9F) HSP 1 Score: 115 bits (288), Expect = 6.550e-29 Identity = 61/138 (44.20%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 1 ILDKMKELRPIVETGYENILLVRLLIEESPCSHADPPVFSLARVCQQRWPRTIDDGWISLVAVLDALALRYGLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALL-EHAG 411
I+D+M +RP+VETGYEN+LLVRLL+E P + V + I D W+ L ++ +G REEL+D FG RDEWME D W+GAN+FY G+ +A+ +Y++TTKQ+RFA LL E AG
Sbjct: 47 IVDQMHIVRPVVETGYENLLLVRLLLEMRL------PSIRKSSVSEGLTVERILDNWLKLKPIIME---EWGEQREELIDLFGKVRDEWMEKDLASWIGANRFYPGVADALKFSSSSIYIVTTKQSRFADVLLRELAG 175
BLAST of mRNA_E-fasciculatus_F_contig12032.1583.1 vs. uniprot
Match: A0A6P5FLQ5_ANACO (uncharacterized protein LOC109714257 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5FLQ5_ANACO) HSP 1 Score: 115 bits (288), Expect = 6.700e-29 Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 1
Query: 1 ILDKMKELRPIVETGYENILLVRLLIEESPCSHADPPVFSLARVCQQRWPRTIDDGWISLVAVLDALALRYGLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALL-EHAG 411
I+D+M LRP+VETGYEN+LLVRLL+E P + V + I + W+ L V+ + R+ L+D FG RDEW+ DF GW+GAN+FY G+ +A+ EVY++TTKQ+RFA ALL E AG
Sbjct: 48 IIDQMHILRPVVETGYENLLLVRLLLE------IQIPSIRKSSVADGLSIQAILENWLQLKPVI---MKEWNEERDALIDLFGKVRDEWIRNDFSGWIGANRFYPGVADALRFSSSEVYIVTTKQSRFAEALLRELAG 176
BLAST of mRNA_E-fasciculatus_F_contig12032.1583.1 vs. uniprot
Match: UPI0007AF26AF (uncharacterized protein LOC107638079 n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI0007AF26AF) HSP 1 Score: 113 bits (282), Expect = 8.320e-29 Identity = 61/138 (44.20%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 1 ILDKMKELRPIVETGYENILLVRLLIEESPCSHADPPVFSLARVCQQRWPRTIDDGWISLVAVLDALALRYGLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALL-EHAG 411
I+D+M +RP+VETGYEN+LLVRLL+E P + V + I + W L V+ + +RE L+D FG RDEW+E DF W+GAN+FY G+ +A+ VY++TTKQ+RFA ALL E AG
Sbjct: 47 IVDQMHSVRPVVETGYENVLLVRLLLETRI------PSIRKSSVAEGLTVEGILENWSKLKPVIME---EWSENRETLIDLFGKVRDEWLEQDFATWIGANRFYPGVSDALKFASSRVYIVTTKQSRFADALLREIAG 175
BLAST of mRNA_E-fasciculatus_F_contig12032.1583.1 vs. uniprot
Match: A0A7S4FSV3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FSV3_9EUGL) HSP 1 Score: 117 bits (294), Expect = 1.630e-28 Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 1 ILDKMKELRPIVETGYENILLVRLLIEESPCSHADPPVFSLARVCQQRWPRTIDDGWISLVAVLDALALRYGLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALLEHAG 411
+L KM +LRPIVETGYEN++L RL+ EE S AR R P T+ + + +L L ++GL R+E++D FG RD+WM D GWL N+ Y+G+ EA++A ++Y+ITTKQ RFA ALL+ AG
Sbjct: 200 VLGKMAKLRPIVETGYENMILARLMFEELAASRR-------ARDIGSR-PLTVGEVSANWGELLPRLMDKWGLDRQEMIDYFGQVRDDWMAEDLDGWLRPNRMYQGVVEALNASSVDMYIITTKQQRFAHALLKDAG 328
BLAST of mRNA_E-fasciculatus_F_contig12032.1583.1 vs. uniprot
Match: A9P145_PICSI (Uncharacterized protein n=2 Tax=Picea sitchensis TaxID=3332 RepID=A9P145_PICSI) HSP 1 Score: 114 bits (286), Expect = 1.710e-28 Identity = 60/134 (44.78%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 1 ILDKMKELRPIVETGYENILLVRLLIEESPCSHADPPVFSLARVCQQRWPRTIDDGWISLVAVLDALALRYGLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALLE 402
ILD M+ +RP+VETGYEN+LLVRLL+E P + V I + W L V+ + +G S EELV+ FG RDEW+E D W+GAN+FY G +A+ +VY++TTKQ RFA ALL+
Sbjct: 47 ILDNMRTVRPVVETGYENLLLVRLLLE------LKKPTIRKSSVVPGLTVEGILENWSKLKPVI---MMEWGESSEELVELFGKVRDEWLEHDLSSWIGANRFYPGTADALRFASSKVYIVTTKQGRFAEALLQ 171
BLAST of mRNA_E-fasciculatus_F_contig12032.1583.1 vs. uniprot
Match: A0A251V267_HELAN (Uncharacterized protein n=7 Tax=Asteraceae TaxID=4210 RepID=A0A251V267_HELAN) HSP 1 Score: 114 bits (284), Expect = 2.580e-28 Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 1
Query: 1 ILDKMKELRPIVETGYENILLVRLLIEESPCSHADPPVFSLARVCQQRWPRTIDDGWISLVAVLDALALRYGLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALL-EHAG 411
I+D+M +RP+VETGYEN+LLVRLL+E P + V + I + W + V+ + +REELVD FG RD+WME D W+GAN+FY G+P+A+ ++Y++TTKQ RFA ALL E AG
Sbjct: 47 IVDQMHTVRPVVETGYENLLLVRLLLE------IKIPSLQTSSVAKGLTIEGILENWADIKPVI---MKEWSENREELVDLFGKVRDDWMEKDLATWIGANRFYPGVPDALRFASSQLYIVTTKQGRFADALLRELAG 175 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12032.1583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12032.1583.1 >prot_E-fasciculatus_F_contig12032.1583.1 ID=prot_E-fasciculatus_F_contig12032.1583.1|Name=mRNA_E-fasciculatus_F_contig12032.1583.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=137bp MKELRPIVETGYENILLVRLLIEESPCSHADPPVFSLARVCQQRWPRTIDback to top mRNA from alignment at E-fasciculatus_F_contig12032:798..2235+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12032.1583.1 ID=mRNA_E-fasciculatus_F_contig12032.1583.1|Name=mRNA_E-fasciculatus_F_contig12032.1583.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1438bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12032:798..2235+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12032:798..2235+ >mRNA_E-fasciculatus_F_contig12032.1583.1 ID=mRNA_E-fasciculatus_F_contig12032.1583.1|Name=mRNA_E-fasciculatus_F_contig12032.1583.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=822bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12032:798..2235+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |