prot_E-fasciculatus_F_contig12025.1579.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12025.1579.1
Unique Nameprot_E-fasciculatus_F_contig12025.1579.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length124
Homology
BLAST of mRNA_E-fasciculatus_F_contig12025.1579.1 vs. uniprot
Match: A0A6H5JIB4_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIB4_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 3.770e-51
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0
Query:   27 GEVVVPYYPELLQALHPLFALTSKGTEGGVVDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENEAVYTCLLGLIHLRHPEALRLLDSIMS 124
            GEV+VPYYPELLQALHPLFALTSKGTEGGVVDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENE VYTCLLGLIHLRHPEALRLLD IM+
Sbjct:  938 GEVIVPYYPELLQALHPLFALTSKGTEGGVVDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENETVYTCLLGLIHLRHPEALRLLDPIMA 1035          
BLAST of mRNA_E-fasciculatus_F_contig12025.1579.1 vs. uniprot
Match: A0A835ZQ81_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ81_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.860e-27
Identity = 60/99 (60.61%), Postives = 75/99 (75.76%), Query Frame = 0
Query:   27 GEVVVPYYPELLQALHPLFALTSKG-TEGGVVDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENEAVYTCLLGLIHLRHPEALRLLDSIMS 124
            GE + P+  ELLQ L P+F    KG TEGG++DNAAAAVAR++MAAP A+PM+QVLP  LSALPLK D  ENE VY C++GL+ +RHP AL  L +IM+
Sbjct: 1385 GESITPHVLELLQLLAPIFQKAGKGSTEGGLLDNAAAAVARIVMAAPGAVPMEQVLPALLSALPLKVDAQENETVYGCVIGLLKMRHPAALASLPAIMT 1483          
BLAST of mRNA_E-fasciculatus_F_contig12025.1579.1 vs. uniprot
Match: A0A7S2D6V2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6V2_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.680e-25
Identity = 59/108 (54.63%), Postives = 72/108 (66.67%), Query Frame = 0
Query:    9 GVNVNSRTHACFVLFLFLGEVVVPYYPELLQALHPLFALTSKGTEGGVVDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENEAVYTCLLGLIHLRHPEAL 116
            GV  N+    C V+ L   E V P+Y  LLQ LHPLF +        V+DNAAAAVARM+ A+ A++P  QVLPVFL  LPLK D +ENEAVY CL GLI +RHP+A+
Sbjct:   25 GVRRNAA-FCCGVMALASPETVAPHYLTLLQHLHPLFQMDPT-LHAAVIDNAAAAVARMMTASLASMPTAQVLPVFLGCLPLKDDMNENEAVYACLAGLIEMRHPDAM 130          
BLAST of mRNA_E-fasciculatus_F_contig12025.1579.1 vs. uniprot
Match: A0A7S2VZD1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZD1_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.460e-23
Identity = 51/92 (55.43%), Postives = 69/92 (75.00%), Query Frame = 0
Query:   26 LGEVVVPYYPELLQALHPLFAL--TSKGTEGGVVDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENEAVYTCLLGLIHLRHPEA 115
            LG+++V  YP++LQA+ PLFAL   +  +    +DNAAAA++RMIMA+PA +PM QVLPV L ALPLK+D +ENE VY CLLGL+ +   +A
Sbjct:  187 LGDLIVTVYPQILQAISPLFALDQNTSDSSAAAIDNAAAAISRMIMASPANVPMGQVLPVLLRALPLKNDMTENETVYQCLLGLLQMNQEDA 278          
BLAST of mRNA_E-fasciculatus_F_contig12025.1579.1 vs. uniprot
Match: A0A7S1BKM5_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKM5_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.060e-23
Identity = 61/117 (52.14%), Postives = 74/117 (63.25%), Query Frame = 0
Query:    8 LGVNVNSR--THACFVLFLFLGEVVVPYYPELLQALHPLFALTSKGTEGGV-------VDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENEAVYTCLLGLIHLRHPEA 115
            L V  NS     AC   F   G + +P YP++L AL PLF L   G  GGV       VDNA AAVARMIMA+P  +P+ QVLP  L+ +PL+SD SENE VY CLLGL+H+ HP+A
Sbjct:  944 LNVRRNSAFCAGACCKSF---GLLPIPQYPQILTALSPLFVLEKAGPSGGVTDPAGACVDNAVAAVARMIMASPENVPVGQVLPTILANVPLRSDFSENETVYECLLGLLHMNHPDA 1057          
BLAST of mRNA_E-fasciculatus_F_contig12025.1579.1 vs. uniprot
Match: A0A7R9Z5S6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z5S6_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.450e-22
Identity = 50/92 (54.35%), Postives = 63/92 (68.48%), Query Frame = 0
Query:   26 LGEVVVPYYPELLQALHPLFAL--TSKGTEGGVVDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENEAVYTCLLGLIHLRHPEA 115
            LGE V P Y ++LQA+ PLF +           VDNAAAAV+RMIMA+P  +PM QVLP  L ALPLK+D +EN+ VY CLLGL+ +  P+A
Sbjct:   84 LGETVAPQYGQILQAISPLFGIDPAQGDASAAAVDNAAAAVSRMIMASPGNVPMSQVLPALLKALPLKNDMTENDTVYKCLLGLLQMNQPDA 175          
BLAST of mRNA_E-fasciculatus_F_contig12025.1579.1 vs. uniprot
Match: A0A067CRP9_SAPPC (Importin N-terminal domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRP9_SAPPC)

HSP 1 Score: 101 bits (251), Expect = 1.970e-22
Identity = 56/119 (47.06%), Postives = 80/119 (67.23%), Query Frame = 0
Query:    9 GVNVNSRTHACFVLFLFL---GEVVVPYYPELLQALHPLFALTSKGTEGGVVDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENEAVYTCLLGLIHLRHPEALRLLDSIMS 124
            G N + + +A F L + +   G  + P Y ++LQALHPLFA      E GVVDNAA+AVA+MIM  P ++P+D V+PVFL ALPLK+D +E E+V+TCLLGL+  ++P  L  +  + +
Sbjct:  906 GENTSVQRNAAFALGMLVKMSGASLAPQYLQVLQALHPLFA----SEEEGVVDNAASAVAKMIMTHPDSVPLDAVMPVFLKALPLKADFTETESVFTCLLGLLQAQNPVVLNAMPQVAA 1020          
BLAST of mRNA_E-fasciculatus_F_contig12025.1579.1 vs. uniprot
Match: A0A024GL05_9STRA (Importin N-terminal domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GL05_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.660e-22
Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 0
Query:   27 GEVVVPYYPELLQALHPLFALTSKGTEGGVVDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENEAVYTCLLGLIHLRHPEALRLLDSIMS 124
            GE +   Y ++LQALHPLF  T++  +  VVDNAAAAVARMI  +P ++P+  VLPVFL ALPLKSD  ENEAVY CL GL+  +H + L+ L SIM 
Sbjct:  929 GEKLTSAYQQMLQALHPLF--TAERNDERVVDNAAAAVARMITTSPTSVPLAPVLPVFLGALPLKSDFEENEAVYKCLNGLVRSKHNDVLQHLGSIME 1024          
BLAST of mRNA_E-fasciculatus_F_contig12025.1579.1 vs. uniprot
Match: A0A7S1ZX61_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZX61_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.020e-21
Identity = 51/93 (54.84%), Postives = 68/93 (73.12%), Query Frame = 0
Query:   26 LGEVVVPYYPELLQALHPLFAL--TSKGTEGGVVDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENEAVYTCLLGLIHLRHPEAL 116
            LGE +   YP+LLQA+ PLF++  T+  +    +DNAAA V+RMIMA+P  +PM QVLPV L ALPLK+D +ENE VY CLLGL+ +  P+A+
Sbjct:  395 LGENIASDYPQLLQAISPLFSVDPTAGDSSAACIDNAAAGVSRMIMASPGNVPMPQVLPVLLKALPLKNDMTENETVYKCLLGLLQMNQPDAI 487          
BLAST of mRNA_E-fasciculatus_F_contig12025.1579.1 vs. uniprot
Match: A0A6T8N9T7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8N9T7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.380e-21
Identity = 56/109 (51.38%), Postives = 71/109 (65.14%), Query Frame = 0
Query:   26 LGEVVVPYYPELLQALHPLFALTSKGTE--GGVVDNAAAAVARMIMAAPAAL-PMDQVLPVFLSALPLKSDRSENEAVYTCLLGLIHLRHP-------EALRLLDSIMS 124
            LGE+VV  YP++L  + PLF + S  ++     VDNAAAAV+RMI   P A+ PM+QVLPV L ALPLK+D +ENE VY CLLGL+   HP       E LR+  S M+
Sbjct:  179 LGELVVSQYPQILSTISPLFQIDSSASDQSAACVDNAAAAVSRMITTCPQAVQPMNQVLPVLLKALPLKNDMTENETVYKCLLGLLQANHPDVAVNKAEFLRVFQSAMA 287          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12025.1579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIB4_9PHAE3.770e-5195.92Importin N-terminal domain-containing protein n=2 ... [more]
A0A835ZQ81_9STRA3.860e-2760.61Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A7S2D6V2_9STRA5.680e-2554.63Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2VZD1_9STRA2.460e-2355.43Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1BKM5_9STRA3.060e-2352.14Hypothetical protein n=4 Tax=Corethron hystrix Tax... [more]
A0A7R9Z5S6_9STRA1.450e-2254.35Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A067CRP9_SAPPC1.970e-2247.06Importin N-terminal domain-containing protein n=2 ... [more]
A0A024GL05_9STRA3.660e-2257.14Importin N-terminal domain-containing protein n=2 ... [more]
A0A7S1ZX61_9STRA1.020e-2154.84Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6T8N9T7_9STRA3.380e-2151.38Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 12..123
e-value: 3.3E-15
score: 57.2
NoneNo IPR availablePANTHERPTHR10527:SF6IMPORTIN-4coord: 22..108
IPR040122Importin beta familyPANTHERPTHR10527IMPORTIN BETAcoord: 22..108
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 17..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12025contigE-fasciculatus_F_contig12025:62..433 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12025.1579.1mRNA_E-fasciculatus_F_contig12025.1579.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12025 62..433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12025.1579.1 ID=prot_E-fasciculatus_F_contig12025.1579.1|Name=mRNA_E-fasciculatus_F_contig12025.1579.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=124bp
MFGCELYLGVNVNSRTHACFVLFLFLGEVVVPYYPELLQALHPLFALTSK
GTEGGVVDNAAAAVARMIMAAPAALPMDQVLPVFLSALPLKSDRSENEAV
YTCLLGLIHLRHPEALRLLDSIMS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR040122Importin_beta
IPR011989ARM-like