prot_E-fasciculatus_F_contig12020.1578.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12020.1578.1
Unique Nameprot_E-fasciculatus_F_contig12020.1578.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length205
Homology
BLAST of mRNA_E-fasciculatus_F_contig12020.1578.1 vs. uniprot
Match: D7G030_ECTSI (EXS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G030_ECTSI)

HSP 1 Score: 400 bits (1029), Expect = 2.300e-138
Identity = 202/204 (99.02%), Postives = 204/204 (100.00%), Query Frame = 0
Query:    1 MMSSDEYEELYLASVRVPLVLAVFLGLWGLVILVLQALQIDFSSVLRKASGPRLATEDEGDTSGKGKPTRVPTPPSWRQVVSTAAGFLGVLLACIHGSRMLRVPPTVAVGGFYFILGGALLVPLQAPSVRQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPCVFASFPYW 204
            MMSSDEYEELYLASVRVPLVLAVFLGLWGLVILVLQALQI+FSSVLRKASGPRLATED+GDTSGKGKPTRVPTPPSWRQVVSTAAGFLGVLLACIHGSRMLRVPPTVAVGGFYFILGGALLVPLQAPSVRQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPCVFASFPYW
Sbjct:    1 MMSSDEYEELYLASVRVPLVLAVFLGLWGLVILVLQALQIEFSSVLRKASGPRLATEDQGDTSGKGKPTRVPTPPSWRQVVSTAAGFLGVLLACIHGSRMLRVPPTVAVGGFYFILGGALLVPLQAPSVRQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPCVFASFPYW 204          
BLAST of mRNA_E-fasciculatus_F_contig12020.1578.1 vs. uniprot
Match: A0A835YVP0_9STRA (EXS family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP0_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 4.020e-20
Identity = 70/197 (35.53%), Postives = 102/197 (51.78%), Query Frame = 0
Query:    8 EELYLASVRVPLVLAVFLGLWGLVILVLQALQIDFSSVLRKAS--------GPRLATEDEGDT------SGKGKPTRVPTPPSWRQVVSTAAG---FLGVLLACIHGSRMLRVPPTVAVGGFYFILGGALLVPLQAPSVRQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYP 187
            EELY   +RVP+VL VF  L G+V+L L  L ID++   +KAS          RL   +  +T      +    P  +P   S    +    G    L +LL C+    + ++ P VAVG F  ++G  LLVP+Q+ ++R       +++  V  P++DV F EVLVADAL SLSRVF+D  +  L++A  W    P
Sbjct:    2 EELYRLCLRVPIVLIVFGCLCGVVMLALDQLGIDYAYHAKKASKLGECHQAALRLRCRETSETVCVLTVASCASPLPLPADKSRSAALQLVLGSGFLLALLLLCLRIGELAQIMPNVAVGAFAIMVGLMLLVPMQS-AMRDGLNFLLSTVGRVLCPSSDVPFVEVLVADALCSLSRVFSDAGLAILVLAATWTSSAP 197          
BLAST of mRNA_E-fasciculatus_F_contig12020.1578.1 vs. uniprot
Match: A0A7S2V3Y7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Y7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.360e-13
Identity = 56/172 (32.56%), Postives = 82/172 (47.67%), Query Frame = 0
Query:   10 LYLASVRVPLVLAVFLGLWGLVILVLQALQIDFSSVLRKASGPRLATEDEGDTSGKGKPTRVPTPPSWRQVVSTAAGFLGVLLACIHGSRMLRVPPTVAVGGFYFILGGALLVPLQAPSVRQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKG 181
            ++ A VR PLV+ +++ LWG  +L+L+ L+I  SSV    SGP L T      +G                  +A  F G++         L   P  AV  FY  +G  L++P  + + R H       +  +FFP   V+F EV VAD++TSL++V AD      LVA G
Sbjct:    1 MFCALVRAPLVIIIYIALWGFNLLILEWLRIVPSSVFSNKSGPELVTGSGAQLAGY-----------------SACLFSGLVFCLGLWCWRLNGTPEGAVCLFYLAVGLYLMLP-SSKAFRSHLGYLLGVMKRIFFPQGRVNFVEVFVADSMTSLAKVLADFGAGIWLVALG 154          
BLAST of mRNA_E-fasciculatus_F_contig12020.1578.1 vs. uniprot
Match: A0A7S2WQN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQN9_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.150e-9
Identity = 55/184 (29.89%), Postives = 91/184 (49.46%), Query Frame = 0
Query:    2 MSSDEYEELYLASVRVPLVLAVFLGLWGLVILVLQA-LQID-FSSVLRKASGPRLATEDEGDTSGKGKPTRVPTPPSWRQVVSTAAGFLGVLL-ACIHGSRMLRVPPTVAVGGFYFILGGALLVPLQAPSVRQHTALFFTSLAGVFFPATD--VHFAEVLVADALTSLSRVFADVAVTFLLVAK 180
            +S D ++E   A +R P+V  ++L LWG+ +  ++  L ID F +VL + S P +     G +        +P  PS R ++ +A   LG LL + +    +L      A+  FY  +   L+V       R +   +  +L  V +P+ +  V F EV VADA+TSLS+VFAD  +   ++  
Sbjct:   27 LSPDAHQEYLRALLRAPIVTILYLALWGIAVFFIKTTLHIDLFGTVLARPSPPLVNGRLPGSS------LSLPPAPSPRTILLSALALLGTLLWSFLVWCGLLHGSVEGAIFAFYVAIPFILVVLPVVGFGRGNIFPYIRTLRRVLWPSAEENVPFVEVFVADAMTSLSKVFADTGLVLAVLVS 204          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12020.1578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G030_ECTSI2.300e-13899.02EXS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YVP0_9STRA4.020e-2035.53EXS family-domain-containing protein n=1 Tax=Tribo... [more]
A0A7S2V3Y7_9STRA1.360e-1332.56Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2WQN9_9STRA2.150e-929.89Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004342EXS, C-terminalPFAMPF03124EXScoord: 14..204
e-value: 1.1E-18
score: 67.6
NoneNo IPR availablePANTHERPTHR10783:SF46PROTEIN ERD1coord: 6..204
NoneNo IPR availablePANTHERPTHR10783XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATEDcoord: 6..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..203
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 180..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..179
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 204..204
NoneNo IPR availableTMHMMTMhelixcoord: 171..193
NoneNo IPR availableTMHMMTMhelixcoord: 75..97
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 104..126
NoneNo IPR availableTMHMMTMhelixcoord: 136..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12020contigE-fasciculatus_F_contig12020:1689..4103 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12020.1578.1mRNA_E-fasciculatus_F_contig12020.1578.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12020 1689..4103 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12020.1578.1 ID=prot_E-fasciculatus_F_contig12020.1578.1|Name=mRNA_E-fasciculatus_F_contig12020.1578.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=205bp
MMSSDEYEELYLASVRVPLVLAVFLGLWGLVILVLQALQIDFSSVLRKAS
GPRLATEDEGDTSGKGKPTRVPTPPSWRQVVSTAAGFLGVLLACIHGSRM
LRVPPTVAVGGFYFILGGALLVPLQAPSVRQHTALFFTSLAGVFFPATDV
HFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPCVFAS
FPYW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004342EXS_C