mRNA_E-fasciculatus_F_contig1201.1569.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1201.1569.1 vs. uniprot
Match: D7FY50_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY50_ECTSI) HSP 1 Score: 561 bits (1446), Expect = 1.310e-194 Identity = 405/460 (88.04%), Postives = 418/460 (90.87%), Query Frame = 1
Query: 154 MASRAYNVLDGIGEAMLALARKHSTPQQWAAWLKVPLQGACREGDIDMVSTLLKAGAASSGERERDGETXXXXXXXXXXXXXXXXXXXXXRARRDVNKVTRWLHHXXXXXXXXXXXXXXXXXXXXAGADVDLPDSHGWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSRRRPDDMSAVDLAVERDTTDVLLEILAARPHVDALDGRGVSALGIAARKGHAKALDVLIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEALLNEDLAIPDDIVGYAVAGNERDEEVVEWIYEMLARAPADRVWRRRGWLAMLRARRHRESEAEQILHPQQYQQXXXXXXXXXXXXXXXXXXXXSQSGDAAMGAVCAPPSTSRKKLSIGEGGGAIGRDYSADRVHPSLKRFHWHVTTMIDTADELVFRKIVTYL 1533
M SRAYNVLDG+GEAMLALAR+HSTPQQWAAWLKVPLQGACREGDIDMVSTLLKAGAASSGERERDGET XXXXXXXXXXXXXXXXXXXXRARRDVNKVTR L HXXXXXXXXXXXXXXXXXXXXAGADVDLPD+HGWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSRRRPDDMSAVDLAVER TTDVLLEILAARPHVDALD RGVSALGIAARKGHAKALDVLIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADE NEDLA PDD+VG+AVAG++RDEEVVEWIYEMLARAPADRVWRRRGWLAMLRARRHRESEAEQI+HPQQ ++ SQ GD MG VCAPPS SR+KLSIG G G RDYSA RVHPSL+RFHW+VTTMIDTADELVFRKIVTYL
Sbjct: 1 MESRAYNVLDGMGEAMLALARRHSTPQQWAAWLKVPLQGACREGDIDMVSTLLKAGAASSGERERDGETPXXXXXXXXXXXXXXXXXXXXRARRDVNKVTRSLLHXXXXXXXXXXXXXXXXXXXXAGADVDLPDTHGWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSRRRPDDMSAVDLAVERGTTDVLLEILAARPHVDALDDRGVSALGIAARKGHAKALDVLIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEVFRNEDLAFPDDVVGHAVAGDKRDEEVVEWIYEMLARAPADRVWRRRGWLAMLRARRHRESEAEQIVHPQQSKEEQGEGGNAREAQNN------SQPGDGVMGVVCAPPSVSRRKLSIGAGEGTTDRDYSAVRVHPSLRRFHWNVTTMIDTADELVFRKIVTYL 454
BLAST of mRNA_E-fasciculatus_F_contig1201.1569.1 vs. uniprot
Match: D7G0H9_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H9_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 3.940e-16 Identity = 61/135 (45.19%), Postives = 78/135 (57.78%), Query Frame = 1
Query: 805 DVLLEILAARPHVDALDGRGVSALGIAARKGHAKALDVLIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEALLNEDLAIPDDIVGYAVAGNERDEEVVEWIYEMLARAPADRVWRRRGWLAMLRAR 1209
DV+ ++ A H + D + L +AA GHA A+ L+ +GA VD A+ + LH ACM ACV LLR ADE + +ED P ++G ER E++V I EML RAPADR WRRRGWL MLR R
Sbjct: 50 DVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVD-ADGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAEDIV-LIREMLRRAPADRAWRRRGWLVMLRNR 182
BLAST of mRNA_E-fasciculatus_F_contig1201.1569.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 1.480e-13 Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 919 LIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEALLNEDLAIPDDIVGYAVAGNERDEEVV---EWIYEMLARAPADRVWRRRGWLAMLRA 1206
L++ GA+ + TPLH+ACMH A V LLR ADE N++ +P D++G G+ DE+V + I MLARAPADR WRRRGWL + R+
Sbjct: 337 LLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRS 435
BLAST of mRNA_E-fasciculatus_F_contig1201.1569.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 1.100e-12 Identity = 47/100 (47.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 919 LIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEALLNEDLAIPDDIVGYAVAGNERDEEVVEW----IYEMLARAPADRVWRRRGWLAMLRA 1206
L++ GA+++ DTPLH+AC L+ + V LLR ADE L N D P D+VG + N+ D+E E I+ MLARAPADR WRRRGWL + R+
Sbjct: 340 LLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVG-VLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRS 438
BLAST of mRNA_E-fasciculatus_F_contig1201.1569.1 vs. uniprot
Match: D8LTL5_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTL5_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 2.380e-11 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 910 LDVLIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEALLNEDLAIPDDIVGYAVAGNERDEEVV---EWIYEMLARAPADRVWRRRGWLAMLRA 1206
+ L++ GAD+ ++ DTPLH AC V LLR ADE L NE+ P DIVG + + DEE+ + I MLARAPADR WRRRG L + R+
Sbjct: 204 IGALLEGGADIHVFDEIDDTPLHRACKRSSVTGVELLLRRGADEELTNEEGDAPADIVGASPSNATVDEEIEVDNQRIRRMLARAPADRSWRRRGLLVLSRS 305
BLAST of mRNA_E-fasciculatus_F_contig1201.1569.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 2.470e-11 Identity = 44/94 (46.81%), Postives = 53/94 (56.38%), Query Frame = 1
Query: 931 GADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEALLNEDLAIPDDIVGYAVAGNERDEEVV---EWIYEMLARAPADRVWRRRGWLAMLR 1203
GADVD + TPLH+AC H + V LLR ADE L N +P D++ G+ DEE + I ML RAPADR WRRRGWL + R
Sbjct: 106 GADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQGDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSR 199
BLAST of mRNA_E-fasciculatus_F_contig1201.1569.1 vs. uniprot
Match: A0A6H5JZY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY3_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 4.620e-11 Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 1
Query: 919 LIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEALLNEDLAIPDDIVGYAVAGNERDEEVV---EWIYEMLARAPADRVWRRRGWLAMLRA 1206
+++ GA+V+ N TPLH+AC A V LL ADE L ++ P DI+G ++ +E+ + I +MLARAPADR WRRRGWL + RA
Sbjct: 187 VLERGANVNARNDNDLTPLHVACSWSSLAVVELLLLWGADEKLTGDNRVSPADIIGVSLLDGSNSQEIQADHQRIRQMLARAPADRSWRRRGWLVLSRA 285
BLAST of mRNA_E-fasciculatus_F_contig1201.1569.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 5.870e-10 Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 919 LIDAGADVDEANQEMDTPLHLACMHLQPACVRTLLRHNADEALLNEDLAIPDDIVGYA--VAGNERDEEVV-EWIYEMLARAPADRVWRRRGWLAMLRA 1206
L++ GADV+ + E TPLH AC + A V LLR ADE L ++ P D++G + V + D E + I++MLARAPADR WRRR WL + R+
Sbjct: 339 LLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRS 437
BLAST of mRNA_E-fasciculatus_F_contig1201.1569.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 1.690e-9 Identity = 55/155 (35.48%), Postives = 67/155 (43.23%), Query Frame = 1
Query: 862 GVSALGIAARKGHAKALDVLIDAGADVDEANQEMDTPL--------------------------------HLACMHLQP---ACVRTLLRHNADEALLNEDLAIPDDIVGYAVAGNERDEEVVEWIYEMLARAPADRVWRRRGWLAMLRARRHRE 1221
G +AL A A+DVL+DAGAD+D TPL HLACM + P A V LLR E L++ P ++ A + R VE + +LA APADR WRRR WL MLRAR RE
Sbjct: 269 GYTALHAGCAMNQAGAMDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSGPMDKTMLHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSRKAREVERAHVLLANAPADRAWRRRSWLVMLRARTERE 423
BLAST of mRNA_E-fasciculatus_F_contig1201.1569.1 vs. uniprot
Match: D8LE17_ECTSI (Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE17_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 2.740e-9 Identity = 48/137 (35.04%), Postives = 69/137 (50.36%), Query Frame = 1
Query: 841 VDALDGRGVSALGIAARKGHAKALDVLIDAGADVDEANQEMDTPLHLACMHLQPA-----CVRTLLRHNADEALLNEDLAIPDDIVGYAVAGNERDE--EVVEWIYEMLARAPADRVWRRRGWLAMLRARRHRESEA 1230
+DALD G S L +A+R GH ++VL+ AGAD + H+A + + A V+ LL + D + +++ G R+ E ++ +LARAPADR WR R WL +LRAR RE EA
Sbjct: 1 MDALDNDGFSPLMLASRNGHRSTVEVLLRAGADTTPRATDSGDFSHMAALDVAAAQGHVGVVKALLGNGGDASAVDDHGCTALHYAAQHERGAPRNSVREEIQRALALLARAPADRTWRYRCWLVILRARAGREREA 137 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1201.1569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1201.1569.1 >prot_E-fasciculatus_F_contig1201.1569.1 ID=prot_E-fasciculatus_F_contig1201.1569.1|Name=mRNA_E-fasciculatus_F_contig1201.1569.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=461bp MASRAYNVLDGIGEAMLALARKHSTPQQWAAWLKVPLQGACREGDIDMVSback to top mRNA from alignment at E-fasciculatus_F_contig1201:8500..16898- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1201.1569.1 ID=mRNA_E-fasciculatus_F_contig1201.1569.1|Name=mRNA_E-fasciculatus_F_contig1201.1569.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8399bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1201:8500..16898- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1201:8500..16898- >mRNA_E-fasciculatus_F_contig1201.1569.1 ID=mRNA_E-fasciculatus_F_contig1201.1569.1|Name=mRNA_E-fasciculatus_F_contig1201.1569.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2766bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1201:8500..16898- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |