prot_E-fasciculatus_F_contig12003.1564.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12003.1564.1
Unique Nameprot_E-fasciculatus_F_contig12003.1564.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length124
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12003.1564.1 vs. uniprot
Match: D7FTC0_ECTSI (Similar to solute carrier family 35, member F4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC0_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 4.140e-30
Identity = 74/115 (64.35%), Postives = 80/115 (69.57%), Query Frame = 0 
Query:    1 DEKETPGGEEGFCAGEGGEGQTSEGGLYPLEEGGTKTGAPAGAGGRDEEETSEEAGRPLPDEEDRRVPGAENDKWYDVWEEGSAGSGEDDESIDGMDDGGFELEGEGDVVDYDES 115
            DE+ETPGG+ G C GEG  GQTSEGGLYPL                    T EEAG+PLPDEEDRRV  + ND + DVWEEGSAGS EDD SID MDDGGFELEGE DV+DYDES
Sbjct: 1366 DEEETPGGDPGVCTGEGVGGQTSEGGLYPLXXXXXXXXXXXXXXXXXXXXTDEEAGQPLPDEEDRRVHRSGNDNFDDVWEEGSAGSDEDDASIDDMDDGGFELEGEQDVLDYDES 1480
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12003.1564.1 vs. uniprot
Match: A0A6H5JLD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD9_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.980e-11
Identity = 36/45 (80.00%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:    1 DEKETPGGEEGFCAGEGGEGQTSEGGLYPLEEGGTKTGAPAGAGG 45
            DE+ETPGG  G C GEGGEGQTSEGGLYPLEEGGT+ GAPA  GG
Sbjct:  365 DEEETPGGHPGVCTGEGGEGQTSEGGLYPLEEGGTEMGAPAEGGG 409
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12003.1564.1 vs. uniprot
Match: A0A6H5JQ87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ87_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.220e-11
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0 
Query:   77 DVWEEGSAGSGEDDESIDGMDDGGFELEGEGDVVDYDES 115
            DVWEEGSAGS EDD SIDGMDD GFELEGE DV+DYDES
Sbjct:   11 DVWEEGSAGSDEDDVSIDGMDDRGFELEGELDVLDYDES 49
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12003.1564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTC0_ECTSI4.140e-3064.35Similar to solute carrier family 35, member F4 n=1... [more]
A0A6H5JLD9_9PHAE1.980e-1180.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQ87_9PHAE2.220e-1187.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12003contigE-fasciculatus_F_contig12003:1620..2487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12003.1564.1mRNA_E-fasciculatus_F_contig12003.1564.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12003 1620..2487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12003.1564.1 ID=prot_E-fasciculatus_F_contig12003.1564.1|Name=mRNA_E-fasciculatus_F_contig12003.1564.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=124bp
DEKETPGGEEGFCAGEGGEGQTSEGGLYPLEEGGTKTGAPAGAGGRDEEE
TSEEAGRPLPDEEDRRVPGAENDKWYDVWEEGSAGSGEDDESIDGMDDGG
FELEGEGDVVDYDESSFMCVPCA*
back to top