mRNA_E-fasciculatus_F_contig12001.1562.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12001.1562.1 vs. uniprot
Match: D8LIQ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIQ9_ECTSI) HSP 1 Score: 291 bits (744), Expect = 4.580e-99 Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 1
Query: 1 QVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRKKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAKFDNLVKKSITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIEKRLEPDEMEGWR 444
+VWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRKKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAKFDNLVK SITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIEKRLEPDEMEGWR
Sbjct: 29 EVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRKKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAKFDNLVKASITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIEKRLEPDEMEGWR 176
BLAST of mRNA_E-fasciculatus_F_contig12001.1562.1 vs. uniprot
Match: A0A835ZAA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA4_9STRA) HSP 1 Score: 119 bits (297), Expect = 6.420e-29 Identity = 68/175 (38.86%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 1 QVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFH-------------------------------RKKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAK-FDNLVKKSITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIEKRLEPDE 429
++WM EQKK+ + G + KWE K++FREYMED+NT TLPH+KYI+ KWEM E+ +KK EAKR +G ++ DE + L+++R ++ + FDN++ ++ +K + M+SQ+LLRA+MQ AY+ GD++ V++IE RL PDE
Sbjct: 250 EIWMQEQKKVAEAGLLQKWEVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTAG-DEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGDLDKVRKIEARLAPDE 423
BLAST of mRNA_E-fasciculatus_F_contig12001.1562.1 vs. uniprot
Match: A0A7S1U4G1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4G1_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.020e-23 Identity = 54/144 (37.50%), Postives = 91/144 (63.19%), Query Frame = 1
Query: 1 QVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRKKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAKFDNLVKKSITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIEKRLEPDEM 432
+ W+ E KK G + ET + F E+ EDFNT TLPH+KY DLE WEMAE+ +++A+ A+ R+ +L + E+E + +R A E ++++V++ + K + M+ Q LLRA+ Q A+K GD+ +++E R++PD++
Sbjct: 67 EAWVAEVKKAPGYSGSRR-ETMELFAEFAEDFNTVTLPHEKYYDLEAWEMAEYRKREAAAAEARSGATSLQLEEEEAMRS--RREAEERKQRSYNDMVRQMLNKDKVDEMRHQQLLRAEAQIAFKSGDLAKARKLEARMKPDKL 207
BLAST of mRNA_E-fasciculatus_F_contig12001.1562.1 vs. uniprot
Match: A0A024TMH4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMH4_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.060e-22 Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 1
Query: 4 VWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRKKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAKFDNLVKKSITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIE 408
VW+ E KKI D G PKWE + F+EYMED+NT TLPH+KY D+EK+EM + HRKK E KR+ G A + +DE M ++ R R K +L+ ++++ K ENM+ Q+ LR +MQ YK G++ +R+E
Sbjct: 110 VWLREVKKISDFNG-PKWEAMELFKEYMEDYNTATLPHEKYYDVEKYEMRQ-HRKK--EGKRK--GGATNAHDDEEAMRRERLRQRVEEENKDFSLIMQTMSKEKIENMRYQEKLRTQMQLHYKSGNVTEARRLE 238
BLAST of mRNA_E-fasciculatus_F_contig12001.1562.1 vs. uniprot
Match: A0A3F2RTC5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTC5_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.480e-22 Identity = 58/141 (41.13%), Postives = 89/141 (63.12%), Query Frame = 1
Query: 1 QVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHR--KKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAKFDNLVKKSITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIEKRL 417
Q W+ + KK+ + G PKWE + F+EYMED+NTCTLPH+KY D+EK+EM ++ + +KA + AS ALS DE + +++ ARE + LV + + K E M+ Q+ LRA+MQ YK G+++ +R+E+ L
Sbjct: 86 QAWLRDVKKMGEFNG-PKWEAMELFKEYMEDYNTCTLPHEKYYDVEKYEMRQYQKQQRKAIAKQMGASDKALSALADEERVRRERQTAREKKEQEEFRLVLQLMDKDKIEAMREQEHLRAQMQMHYKSGNVDEARRLEQLL 225
BLAST of mRNA_E-fasciculatus_F_contig12001.1562.1 vs. uniprot
Match: W4FFX2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFX2_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 7.010e-22 Identity = 58/135 (42.96%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 4 VWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRKKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAKFDNLVKKSITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIE 408
VW+ + KKI+D G PKWE + F+EYMED+NT T PH+KY D+EK+EM + H KKAS+ +R DA DE M ++ R R A K L+ ++++ K E M++Q+ LR +MQ YK G++ +R+E
Sbjct: 118 VWLRDIKKINDFNG-PKWEAMELFKEYMEDYNTATFPHEKYYDVEKYEMRKHH-KKASKDNKRKHDDAPG---DEEAMRRERLRQRIEAGQKDFGLIMQTMSKEKIEGMRNQEKLRTQMQLHYKSGNVTEARRLE 247
BLAST of mRNA_E-fasciculatus_F_contig12001.1562.1 vs. uniprot
Match: A0A418EPQ7_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EPQ7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 9.870e-22 Identity = 55/138 (39.86%), Postives = 87/138 (63.04%), Query Frame = 1
Query: 4 VWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRKKASEAKRR---ASGDALSMREDEMEMNLKKRRAREAANAKFDNLVKKSITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIE 408
VW+ + KKI+D G PKWE + F+EYMED+NT T PH+KY D+EK+EM + H+K + + KR+ A GD +MR + + + EA + F L+ ++++ K E M++Q+ LR +MQ YK G++ +R+E
Sbjct: 137 VWLRDIKKINDFNG-PKWEAMELFKEYMEDYNTATFPHEKYYDVEKYEMRKHHKKASKDNKRKHDDAPGDEEAMRRERLRQRI------EAGHKDF-GLIMQTMSKEKIEGMRNQEKLRTQMQLHYKSGNVTEARRLE 266
BLAST of mRNA_E-fasciculatus_F_contig12001.1562.1 vs. uniprot
Match: D0NJ58_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NJ58_PHYIT) HSP 1 Score: 97.1 bits (240), Expect = 1.160e-21 Identity = 56/141 (39.72%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 1 QVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHR--KKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAKFDNLVKKSITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIEKRL 417
Q W+ + KK+ + G PKWE + F+EYMED+NTCTLPH+KY D+EK+EM + + +KA ++ AS +AL DE + ++ AR+ + LV + + K E M+ Q+ LR++MQ YK G++E +R+E+ L
Sbjct: 122 QAWVRDVKKMGEFNG-PKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYQKQQRKAHAKQKSASDEALDTLADEERVRRERLAARDKKEQEEFRLVLQLMDKDKIEAMREQERLRSQMQMFYKSGNVEEARRLEQIL 261
BLAST of mRNA_E-fasciculatus_F_contig12001.1562.1 vs. uniprot
Match: A0A7S1Z8Y6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z8Y6_TRICV) HSP 1 Score: 96.7 bits (239), Expect = 1.570e-21 Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 1
Query: 1 QVWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRKKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAKFDNLVKKSITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIEKRLEPDEMEGWR 444
+VW+ E + I D +PK+E F++YMED+NT TLPHDKY D EKWEM E+ ++K EAK + D +V++ + + M+ Q L+A+++ AYK GD +T+KR+++RLEPD+ G R
Sbjct: 124 EVWLAEVRGIPDASALPKYEQTSQFKDYMEDYNTATLPHDKYYDYEKWEMEEYTKRKREEAK--LAQDGXXXXXXXXXXXXXXXXXXXXXXXXXMKMVREKLERGGAKEMKEQARLKAELEYAYKTGDKDTIKRLQRRLEPDDDRGRR 269
BLAST of mRNA_E-fasciculatus_F_contig12001.1562.1 vs. uniprot
Match: A0A485L0F4_9STRA (Aste57867_14125 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0F4_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.910e-21 Identity = 56/138 (40.58%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 4 VWMMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRKKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAKFDNLVKKSITGSKRENMQSQDLLRAKMQNAYKHGDMETVKRIEKRL 417
VW+ E KKI D G PKWE + F+EYMED+NT T PH+KY D+EK+EM + +K + K A D +R D L++R+ L +++ K ENM+ Q+ LR +MQ YK G++E +R+E+RL
Sbjct: 69 VWLREVKKIADFNG-PKWEAMELFKEYMEDYNTATFPHEKYYDVEKYEMRKLSKKGKKKRKADAVEDEEQLRRDVQRRKLEERKIELE-------LTMQTMNREKIENMRHQEQLRTQMQLHYKAGNVEEARRLEQRL 198 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12001.1562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12001.1562.1 >prot_E-fasciculatus_F_contig12001.1562.1 ID=prot_E-fasciculatus_F_contig12001.1562.1|Name=mRNA_E-fasciculatus_F_contig12001.1562.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=146bp MMEQKKIHDTGGMPKWETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFback to top mRNA from alignment at E-fasciculatus_F_contig12001:2064..3940- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12001.1562.1 ID=mRNA_E-fasciculatus_F_contig12001.1562.1|Name=mRNA_E-fasciculatus_F_contig12001.1562.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1877bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12001:2064..3940- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12001:2064..3940- >mRNA_E-fasciculatus_F_contig12001.1562.1 ID=mRNA_E-fasciculatus_F_contig12001.1562.1|Name=mRNA_E-fasciculatus_F_contig12001.1562.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=876bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12001:2064..3940- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |