mRNA_E-fasciculatus_F_contig1200.1560.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1200.1560.1
Unique NamemRNA_E-fasciculatus_F_contig1200.1560.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1200.1560.1 vs. uniprot
Match: D8LNT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT9_ECTSI)

HSP 1 Score: 485 bits (1248), Expect = 2.500e-166
Identity = 270/281 (96.09%), Postives = 274/281 (97.51%), Query Frame = 1 
Query:  274 MEVTEDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRKARKLTEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGSELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSSIGRVSAPAVHKKATG-RHSATGGGGARGGRRSSKHGA 1113
            MEVTEDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRK     EAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHG+ELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSS+GRVSAP+VHKKAT  +HSATGGGGARGGRRSSKHGA
Sbjct:    1 MEVTEDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRK-----EAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGAELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSSMGRVSAPSVHKKATTVKHSATGGGGARGGRRSSKHGA 276
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BLAST of mRNA_E-fasciculatus_F_contig1200.1560.1 vs. uniprot
Match: A0A835Z9H7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9H7_9STRA)

HSP 1 Score: 349 bits (896), Expect = 1.160e-113
Identity = 198/247 (80.16%), Postives = 217/247 (87.85%), Query Frame = 1 
Query:  286 EDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRKARKLTEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGSELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSS-IGRVSA 1023
            EDSAV+DFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRK     EAMRSRQIAERLGVEEAHMLEFQQFNMVWD++M+DYE  AE+MV AM ERH  ELR+YQ+RLL  Q RPK+SRELLDLRRIQEHLA+AKDYAEAH+MKLKSDALEAWELE+WR KRQ ++ QRE KFK GKA EM ALL+RV  GREEQKKQRQ DLERLLQRYQNVK ELEAQQ LER+R ER++++  GRV A
Sbjct:    6 EDSAVQDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRK-----EAMRSRQIAERLGVEEAHMLEFQQFNMVWDRKMSDYEARAEEMVAAMLERHEEELREYQQRLLTTQSRPKYSRELLDLRRIQEHLARAKDYAEAHRMKLKSDALEAWELERWRTKRQGEMLQREQKFKQGKATEMQALLKRVQMGREEQKKQRQGDLERLLQRYQNVKMELEAQQNLERMRVERRAAARSGRVRA 247
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BLAST of mRNA_E-fasciculatus_F_contig1200.1560.1 vs. uniprot
Match: A0A6V1QLJ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QLJ6_HETAK)

HSP 1 Score: 348 bits (894), Expect = 7.790e-113
Identity = 190/259 (73.36%), Postives = 221/259 (85.33%), Query Frame = 1 
Query:  223 GRKGREGVGLRGEKEILMEVTEDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRKARKLTEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGSELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQS 999
            G++   G  L     + M+ TEDSAV+DFL+ILEEHRRNCERQGKYVEA+IAKNRL+ELK+HEENRRK     EAMRSRQIAERLGVEEAHMLEFQQFNMVWD++M +YE HA+D++ +M+ERH +ELR +Q++LL  QPRPKFSRELLDLRRIQEHLAK KDY EAHK+KLKSDALEAWE+E+WRN++Q ++ QRE+KFKHG    + AL +RV  GREEQKKQRQMDLERLLQRYQNVKSELEAQQ LERIRAER S
Sbjct:    8 GQQPELGTCLCPSTSLRMDTTEDSAVQDFLQILEEHRRNCERQGKYVEADIAKNRLEELKMHEENRRK-----EAMRSRQIAERLGVEEAHMLEFQQFNMVWDRKMENYEQHAQDLILSMKERHAAELRQFQQKLLDNQPRPKFSRELLDLRRIQEHLAKGKDYQEAHKIKLKSDALEAWEVEKWRNQKQQEMLQREAKFKHGXXXXLIALQKRVQTGREEQKKQRQMDLERLLQRYQNVKSELEAQQNLERIRAERMS 261
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BLAST of mRNA_E-fasciculatus_F_contig1200.1560.1 vs. uniprot
Match: A0A7S2UZK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZK5_9STRA)

HSP 1 Score: 333 bits (854), Expect = 2.230e-107
Identity = 181/242 (74.79%), Postives = 214/242 (88.43%), Query Frame = 1 
Query:  274 MEVTEDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRKARKLTEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGSELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQS 999
            M+  EDSAV+DFL+ILEEHRRNCERQGKYVEAEIAKNRL+ELKLHEENRRK     EAMRSRQIAERLGVEEAHMLEFQQFNMVWD++M +YEHHA+++V AM+ERH +ELR++QR LL+ Q RPKFSRELLDLR+IQEHLA++KDY EAHK+KLKSDALEAWELE+W+++++ ++ Q+E+     K QE+ AL +R+  GREEQKKQRQMDLERLLQRYQNVKSELEAQQ LERIR+ER S
Sbjct:    1 MDGQEDSAVQDFLQILEEHRRNCERQGKYVEAEIAKNRLEELKLHEENRRK-----EAMRSRQIAERLGVEEAHMLEFQQFNMVWDRKMEEYEHHAQELVRAMKERHMAELREFQRNLLERQQRPKFSRELLDLRKIQEHLARSKDYQEAHKIKLKSDALEAWELEKWKSQKEQEMLQKEAXXXXXKQQELIALQKRIQTGREEQKKQRQMDLERLLQRYQNVKSELEAQQNLERIRSERHS 237
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BLAST of mRNA_E-fasciculatus_F_contig1200.1560.1 vs. uniprot
Match: A0A7S3HDC8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDC8_9STRA)

HSP 1 Score: 333 bits (854), Expect = 3.500e-107
Identity = 183/249 (73.49%), Postives = 217/249 (87.15%), Query Frame = 1 
Query:  274 MEVTEDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRKARKLTEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGSELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSSIGRVS 1020
            M+ +ED+AV+DFLEILEEHR+NCERQGKYVEAEIAKNRLDELKLHEENRR+     EAMRSRQIAERLGVEEAHMLEFQQFN++WD++M +YE HAE++V AM+ERH +ELRDYQR+L+  Q RPKFS++LL+LR+IQE LAK KDYAEAHK+KLKSDALEAWELE+W ++RQ DL Q+E+KFK  K QE+ AL +R+ +GREEQKKQR MDLERLLQRYQNVK+ELEAQQ LERIR E+ + S G  S
Sbjct:    1 MDPSEDTAVQDFLEILEEHRKNCERQGKYVEAEIAKNRLDELKLHEENRRR-----EAMRSRQIAERLGVEEAHMLEFQQFNLIWDRKMTEYETHAEELVEAMKERHAAELRDYQRKLMGKQLRPKFSKDLLNLRKIQETLAKQKDYAEAHKIKLKSDALEAWELEKWHSERQQDLLQKEAKFKFNKQQELLALQKRIQSGREEQKKQRHMDLERLLQRYQNVKAELEAQQNLERIRMEKLAQSGGLTS 244
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BLAST of mRNA_E-fasciculatus_F_contig1200.1560.1 vs. uniprot
Match: A0A7S2SB13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SB13_9STRA)

HSP 1 Score: 318 bits (815), Expect = 1.340e-101
Identity = 175/240 (72.92%), Postives = 204/240 (85.00%), Query Frame = 1 
Query:  274 MEVTEDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRKARKLTEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGSELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAER 993
            ME  EDSAV DFL+ILEEHR+NCERQGKYVEAEIAKNRL+ELKLHEENRRK     EAMRSRQ+AERLGVEEAHMLE+QQFNM WD++M +YE HA ++V AMRERH +ELR++Q  LLQ Q RPKFSRELL+LRRIQEHLAK KDY EAHK+KLK DALEAWELE+W+N++Q ++ QRE+KF       + AL +R+  GREEQKKQR++DLERLLQRY+NVK+ELEAQQ LERIR ER
Sbjct:    1 MESAEDSAVADFLQILEEHRKNCERQGKYVEAEIAKNRLEELKLHEENRRK-----EAMRSRQLAERLGVEEAHMLEYQQFNMDWDRKMGEYETHANELVEAMRERHKAELREFQESLLQKQQRPKFSRELLNLRRIQEHLAKQKDYTEAHKIKLKCDALEAWELEKWKNQKQQEMFQREAKFXXXXXXXLIALQKRIQTGREEQKKQRELDLERLLQRYRNVKNELEAQQNLERIRMER 235
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BLAST of mRNA_E-fasciculatus_F_contig1200.1560.1 vs. uniprot
Match: A0A812XSJ3_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XSJ3_SYMMI)

HSP 1 Score: 312 bits (799), Expect = 1.400e-99
Identity = 168/220 (76.36%), Postives = 194/220 (88.18%), Query Frame = 1 
Query:  286 EDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRKARKLTEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGSELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVK 945
            EDSAV+DFLEILEEHR+NCERQGKYVEAEIAKNRL+ELKLHEENRR+     EAMRSRQIAERLGVEEAHMLEFQQFNM+WD++MADYE HAE++V AM+ERH +ELR+YQRRL+  Q RPKFS++LL+LR+IQE LAK KDYAEAHK+KLK+DALEAWELE+W ++RQ DL  +E KFKH K QE+ AL +R+  GREEQKKQR  DLERLLQRYQNVK
Sbjct:    4 EDSAVQDFLEILEEHRKNCERQGKYVEAEIAKNRLEELKLHEENRRR-----EAMRSRQIAERLGVEEAHMLEFQQFNMIWDQKMADYESHAEELVEAMKERHAAELREYQRRLMTKQIRPKFSKDLLNLRKIQETLAKQKDYAEAHKIKLKADALEAWELEKWHSQRQTDLLAKEGKFKHVKQQELVALQKRIQTGREEQKKQRHQDLERLLQRYQNVK 218
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BLAST of mRNA_E-fasciculatus_F_contig1200.1560.1 vs. uniprot
Match: A0A7S2CQS6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQS6_9STRA)

HSP 1 Score: 312 bits (800), Expect = 2.520e-99
Identity = 171/240 (71.25%), Postives = 200/240 (83.33%), Query Frame = 1 
Query:  274 MEVTEDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRKARKLTEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGSELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAER 993
            ME  ED+AV DFL ILEEHR+NCERQGKYVEAEIAKNRL+ELKLHEENRRK     EAMRSRQ+AERLGVEEAHMLE+QQFNM WD++M +YE HA ++  AM ERH +ELRD+Q  LL  Q RPKFSRELL+LR IQ HLA  KDY EAHK+KLK DALEAWEL++W+  +Q ++ QRE+KFKH K QE+ AL +R+  GREEQKKQR++DLERLLQRY+NVK+ELEAQQ LERIR E+
Sbjct:    1 METAEDNAVSDFLSILEEHRKNCERQGKYVEAEIAKNRLEELKLHEENRRK-----EAMRSRQLAERLGVEEAHMLEYQQFNMDWDRKMNEYEKHASELADAMTERHKAELRDFQENLLHKQQRPKFSRELLNLREIQRHLAMQKDYTEAHKIKLKCDALEAWELDKWKILKQQEMFQREAKFKHQKQQELLALRKRIQTGREEQKKQRELDLERLLQRYRNVKNELEAQQNLERIRMEK 235
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1200.1560.1 vs. uniprot
Match: F0Y536_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y536_AURAN)

HSP 1 Score: 306 bits (783), Expect = 4.590e-96
Identity = 179/274 (65.33%), Postives = 209/274 (76.28%), Query Frame = 1 
Query:  184 PRYRRRSSAVHSAGRKGREGVGLRGEKEILMEVTEDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRKARKLTEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGSELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSS 1005
            P  RR +S+V  A R  R                ++SAV DFL+ILEEHR+NCERQGKYVEAEIAKNRL+ELK+HEENRRK     EAMRSRQIAERLGVEEAHMLEFQQFN++WDK+M++YE+HA D+V AM+ERH +ELRD+Q  LLQ Q RPKFSRELL+LRRIQEHLA+ KDY EAHK+KLK DALEAWELE+W+N +Q ++ QRE+KFKH K QE+ AL +RV  GREEQKKQ              VKSELEAQQ LERIRAER +SS
Sbjct:   26 PARRRATSSVARATRPAR---------------AQESAVADFLQILEEHRKNCERQGKYVEAEIAKNRLEELKMHEENRRK-----EAMRSRQIAERLGVEEAHMLEFQQFNIIWDKKMSEYENHAADLVEAMKERHAAELRDFQGALLQRQARPKFSRELLNLRRIQEHLARQKDYTEAHKIKLKCDALEAWELEKWQNGKQQEMFQREAKFKHQKQQELVALQKRVQTGREEQKKQXXXXXXXXXXXXXXVKSELEAQQNLERIRAERMASS 279
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BLAST of mRNA_E-fasciculatus_F_contig1200.1560.1 vs. uniprot
Match: A0A1V9ZAE8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZAE8_9STRA)

HSP 1 Score: 311 bits (798), Expect = 7.890e-96
Identity = 167/232 (71.98%), Postives = 204/232 (87.93%), Query Frame = 1 
Query:  286 EDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRRKARKLTEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGSELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERI 981
            EDSAV DFL+ILEEHR+NCE+QGKYVEAEIAKNRL+ELK+HEENRRK     EAMRSRQIAERLGVEEAHMLEFQQFN+VWDK+M +YE + E++V  MR+RH SEL ++Q++LL+ Q +PKFS+ELL+LR+I+EHLA+ KDYAEAHKMKLK+DALEAWE+E+WRN +Q ++ QRE KFK  + QE+ AL +R+ +GREEQKKQRQ+DLERLLQRYQNVK+EL+ QQ LERI
Sbjct:    5 EDSAVADFLQILEEHRKNCEKQGKYVEAEIAKNRLEELKVHEENRRK-----EAMRSRQIAERLGVEEAHMLEFQQFNVVWDKKMEEYEQNIEELVLNMRDRHKSELLEFQQKLLEKQTKPKFSKELLNLRKIEEHLARQKDYAEAHKMKLKADALEAWEMEKWRNSKQQEMFQREVKFKQRQRQELDALQKRIQSGREEQKKQRQLDLERLLQRYQNVKAELQQQQNLERI 231
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1200.1560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNT9_ECTSI2.500e-16696.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z9H7_9STRA1.160e-11380.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1QLJ6_HETAK7.790e-11373.36Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UZK5_9STRA2.230e-10774.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3HDC8_9STRA3.500e-10773.49Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2SB13_9STRA1.340e-10172.92Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A812XSJ3_SYMMI1.400e-9976.36Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A7S2CQS6_9STRA2.520e-9971.25Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0Y536_AURAN4.590e-9665.33Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A1V9ZAE8_9STRA7.890e-9671.98Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1200contigE-fasciculatus_F_contig1200:10978..16212 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score485.0
Seed ortholog evalue2.4e-134
Seed eggNOG ortholog2880.D8LNT9
KEGG koko:K20929
EggNOG OGs28KHC@1,2QSYJ@2759
EC1.2.3.15
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-08_005830.1
Exons7
Model size1917
Cds size843
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927709.3546937-UTR-E-fasciculatus_F_contig1200:10977..117781622927709.3546937-UTR-E-fasciculatus_F_contig1200:10977..11778Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1200 10978..11778 -
1695995660.573254-UTR-E-fasciculatus_F_contig1200:10977..117781695995660.573254-UTR-E-fasciculatus_F_contig1200:10977..11778Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1200 10978..11778 -
1622927709.4408917-UTR-E-fasciculatus_F_contig1200:15939..162121622927709.4408917-UTR-E-fasciculatus_F_contig1200:15939..16212Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1200 15940..16212 -
1695995660.6593783-UTR-E-fasciculatus_F_contig1200:15939..162121695995660.6593783-UTR-E-fasciculatus_F_contig1200:15939..16212Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1200 15940..16212 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927709.3703425-CDS-E-fasciculatus_F_contig1200:11778..119651622927709.3703425-CDS-E-fasciculatus_F_contig1200:11778..11965Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 11779..11965 -
1695995660.5890634-CDS-E-fasciculatus_F_contig1200:11778..119651695995660.5890634-CDS-E-fasciculatus_F_contig1200:11778..11965Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 11779..11965 -
1622927709.38053-CDS-E-fasciculatus_F_contig1200:12362..124511622927709.38053-CDS-E-fasciculatus_F_contig1200:12362..12451Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 12363..12451 -
1695995660.6021707-CDS-E-fasciculatus_F_contig1200:12362..124511695995660.6021707-CDS-E-fasciculatus_F_contig1200:12362..12451Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 12363..12451 -
1622927709.390333-CDS-E-fasciculatus_F_contig1200:12884..130371622927709.390333-CDS-E-fasciculatus_F_contig1200:12884..13037Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 12885..13037 -
1695995660.6105843-CDS-E-fasciculatus_F_contig1200:12884..130371695995660.6105843-CDS-E-fasciculatus_F_contig1200:12884..13037Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 12885..13037 -
1622927709.4001615-CDS-E-fasciculatus_F_contig1200:13233..133351622927709.4001615-CDS-E-fasciculatus_F_contig1200:13233..13335Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 13234..13335 -
1695995660.620867-CDS-E-fasciculatus_F_contig1200:13233..133351695995660.620867-CDS-E-fasciculatus_F_contig1200:13233..13335Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 13234..13335 -
1622927709.4101498-CDS-E-fasciculatus_F_contig1200:13847..139911622927709.4101498-CDS-E-fasciculatus_F_contig1200:13847..13991Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 13848..13991 -
1695995660.6344702-CDS-E-fasciculatus_F_contig1200:13847..139911695995660.6344702-CDS-E-fasciculatus_F_contig1200:13847..13991Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 13848..13991 -
1622927709.4211378-CDS-E-fasciculatus_F_contig1200:14567..146841622927709.4211378-CDS-E-fasciculatus_F_contig1200:14567..14684Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 14568..14684 -
1695995660.6428277-CDS-E-fasciculatus_F_contig1200:14567..146841695995660.6428277-CDS-E-fasciculatus_F_contig1200:14567..14684Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 14568..14684 -
1622927709.43103-CDS-E-fasciculatus_F_contig1200:15888..159391622927709.43103-CDS-E-fasciculatus_F_contig1200:15888..15939Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 15889..15939 -
1695995660.6515944-CDS-E-fasciculatus_F_contig1200:15888..159391695995660.6515944-CDS-E-fasciculatus_F_contig1200:15888..15939Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1200 15889..15939 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1200.1560.1prot_E-fasciculatus_F_contig1200.1560.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1200 11779..15939 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1200.1560.1

>prot_E-fasciculatus_F_contig1200.1560.1 ID=prot_E-fasciculatus_F_contig1200.1560.1|Name=mRNA_E-fasciculatus_F_contig1200.1560.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=281bp
MEVTEDSAVKDFLEILEEHRRNCERQGKYVEAEIAKNRLDELKLHEENRR
KARKLTEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMV
FAMRERHGSELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEA
HKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMA
GREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSSIGRVSA
PAVHKKATGRHSATGGGGARGGRRSSKHGA*
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mRNA from alignment at E-fasciculatus_F_contig1200:10978..16212-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1200.1560.1 ID=mRNA_E-fasciculatus_F_contig1200.1560.1|Name=mRNA_E-fasciculatus_F_contig1200.1560.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5235bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1200:10978..16212- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCTCGCTCGCTCCTCCCGCCCTCCCTCCGCCCGCACATCAACGCTCCCGG
CTTTCACTCGGCCGGGTTTATAGAATCTCTGTACCTGAAAAAGATCATCT
GGACATCAGCCTTAGGGACCTACCCGCTCGTGCAGCAGTAGCAGCCACAT
CACAAGCGGCGGAATAAGTGTATCTCGATTCCGCCGCGTTATCGCCGCCG
CAGTTCAGCAGTTCACTCGGCAGGCCGAAAAGGTCGCGAGGGTGTGGGGC
TTCGGGGAGAGAAGGAGATACTGATGGAAGTGACAGAGGACTCTGCGGTG
AAGGACTTCCTAGAGATACTTGAGGTGTGGTCCGAAGGAAGAGCTGGTGA
CAAAACCTTTGATGAGCTTCGATAGAGGTGTTGGTTGAGGTTGCAGCGGT
CGGCACAATTGAAGCGAAGCAAGGGACACATCGTTGGATTGTGAGAGCGT
TGGAGAAGCTACAATAGCATGGAGGAGCAGGCAGCGAGAGACAAGCTGAA
TATGAGCCCTTGGCTACGGTGTCGCTGGCAGTACATAAATCTCCTCACGT
ACCCTGACATTGACCGCGCAAATAGGTAGTCGGCAGCAGCAGTAGACTGC
TGCTGTCCATAAAGGCGGCAGTGATCACAAATGACAGGACGGCGGTAGGC
GGATAAGCGTTGTTATATTGTACTTCCAAGCGCATTCAATTGAGAGTGTC
CTCAGGAAGTAAGCAAGACAGCAGTAAGGCAATAGAGCATTACTCGTTGG
TCAAGTTGTTCCCACCACCTCGGAGGCTGGTCGCGGTGTCCGTTCTCGAT
AGCAAGAGGATTACAGTCTATGCCTTCCCAAGGGTTCGCAACAATAACCT
CGGACGTGATCAGGTCACTTTTCGCGCTCCACCAGTGGCCTCACCGTGCG
CGGCGTGTCGTTCACATCACCAGTTTTTAGGATTGGACACACCTAACCCT
ACCAAATCCAGCATCCGGCGGTCTTCACCAGCCTATAGTGCCAAGACTTC
GCGGCATTTTGCCTCAAAAAAAGCAACATCTCGCCAGTCATGTTTGCAAC
GGGGGTCATGTTTAGGGTTTTAACAGCTGCGGTGAACATCGTTGCTGTAG
CTTAAACGGCGACAGCGGAGTTCGTCCATTGTGGTGCTGTAATTGTGGTA
TGATTCCACCTATAACACGTTGGCGAGACGGGTAGACTCGTGGATTTCCC
ATTTTTCATCTGAAAGCAGCTATGTAGAGGTAACCGCTCCTTTTTCATGC
AACCCATGCGTCACGGGCGAGGAGCACCTCGAGGCAACAAATCTGTGTTA
TCGTTCTAGTTTCCACAACCATCGCTTTCGCCACTGGTAGCCGACACCTT
CATGAATGCACACAACTTCCCCAAGGCACGGCCCTTCCTTTGGCACCGAC
ACGCAGAAGGGAAAGTTGAGGATGTCGACTTGAGGAGCGAGGCTCTCTAA
CGCTCTCTTCGATGATGGCCAACACCACACACAACACCACACACTTCATT
ATCCCCCGAAACAAACATGGTCGAACAGGAGCACCGGCGCAACTGCGAGC
GGCAAGGCAAGTATGTGGAGGCGGAGATCGCGAAGAACCGGTTGGACGAG
CTCAAGCTTCACGAGGAAAACAGAAGAAAGGCAAGGAAGCTAACAGTCAC
TGTTGCGACACAGACCGTCGCAGTTGGTTTTACATGATTCCTATCTAACA
CGACGACGTGTTGGCAAACTGGGGCGGTCGCACCGCGTGTTCGACTGAAG
TCTCTGCTAGGCTTGAGTTGCCATGGCTAGCAATCGCTGAACCCTAGCTC
TCCCAGACCTCGCATGGAGTGCCGAGGGTGTCACGATATCCGCCAACACC
TTGCCGTCACCGACGAATACGGCCAGCAGGCCTCCCCTAGAGACCGATCT
GTACCGAGGCCGTAAAACGTTGAGCCAAACTCTCCAACCTGACTAGCACT
CGAAATACAGCTATCTGGTACTCACGTCCTCTGCCGGGTGTCGGTTGAAC
ATCAGAAACGCGTTCTGGACGCCCATTCCTCGCACATTGGGTACTAGTGT
TCATTTGGTGCGTCTCCCCGGCTGGACCATAGCTCTACGCATGACAGAAC
AATGCCAGATCCTCTTAAACGTAGTGTGATCAACTTGAGCGGTTCGCCGT
ACCTCCGCCAGTCTTTGTTTGTACGATTCAGCAAGGTAAGACTGTCCTCA
CGATTGTTAAAAATCCCCCAGGAGGCGATGCGTTCGAGGCAAATCGCGGA
GAGGCTAGGGGTGGAGGAGGCTCACATGCTCGAGTTCCAGCAGTTCAACA
TGGTCTGGGACAAGAGGATGGCAGACTATGAGCACCATGCCGAAGACATG
GTGTTCGCAATGAGGGTGCGTGAGGGATAAGATTCATCAACAAGAACAGT
GTGAAATGACGAGGACAGTGGATAGAAAAACTTCCAAGAACCCCCATCGA
CATTCTACGTTGAAACCACCTCGGTGGGACTCAACTAATGGGTAACCCGA
GGTTGGATGGTTGTGGAAGGGTGTCGACAACGCCAAAGGCATCGCGGCAG
GATCTATGGTGTGCACTACACGAACCCACCCACGCCGCGGGTACCCCGTT
ACTGCTCTCCTTCCTACCGCAACATCCTGAAAACAAAGTGTGTTGCGAAC
AAAGCTCCAAGCAAGTTCGCTCTGGTGTGTTGTAGAATCGAGGTTCGACC
GCTTGGGGAAGCCGCGTACTACCCTAGAACACACTGCCGAGTCAGTCTTA
CCTCCCCTCTTGTAGTAGGTTATTTTTCTTTAGGATGTCTTGACGCACAA
GGATCTGCGTGAACCTCCGGGCAGAAAAAGAGAAAACAGGAAAAATTGTT
TTAAATTCGCCGTTTGACCGTTCACAGGAGAGACACGGCTCTGAGCTTCG
TGACTATCAGCGGAGGCTGTTGCAGGCCCAGCCCCGCCCAAAGTTCAGCC
GTGAGCTCCTGGACCTTCGACGTATACAGGTGTGACAAGAGTCGTCCTCC
TCTTGCTGCTTGATTTTTGTCGACATGTTACTGCTGCAGACTCCGGTTGA
GTCGCCCTTATTCGCGTTTTGTCTCCGATGCTCTGCGAGGGAGATATAGT
ATATACTGCTGATGGCGCGGCTACCGTCGTGCACGGCTCCAATTCGTAGT
ATCCCGCCCGAAAACCCCATCGCAGGAGCACCTAGCCAAGGCCAAAGACT
ACGCGGAGGCCCACAAGATGAAGCTCAAGTCGGACGCCCTCGAAGCCTGG
GAGCTGGAGCAATGGAGAAACAAGAGGCAGGCCGACTTGTGCCAACGGGA
AAGCAAGTTTAAGCACGGAAAGGCGCAGGTACTCCGCGAAAGGATACCGT
TGTTGTTGTTGTTGTTGTTGTTGTTCCTATCAATGGAGATTTCCTTGAAT
ACTTGAGGCACACTGTGGTTGCAAGCTTGTTGTATGTTGTAGTCGTCGCT
TCGTCTTGAACCCACGGGAATGGCGGAACTCCAAAGGAGGCCCGCTGTAC
TGCGGGTACAAGGAGGGTGTCCGGCTAACGTGCGAGGGTCATGACTGGAT
ACATGCCACACCTAGTTTTCGTTCACCACTACACTGCTCCTCAGGTTCTT
GACTAAATGTAGTGGCGTAGACTGGAGGGGGTTCCCGAGTGCCAGTGTTC
AATACGAGTTGATACTTGCACTCAGGCACCCATGCTCCTCGGGAATTGTT
GCTATCCTCGACACGACCCCCGCGTCCGACGTGGTTACCTTATCTTTGTT
GTGGGCTCTAGGAAATGGCGGCGCTACTCCAGCGGGTAATGGCAGGTCGA
GAGGAGCAAAAGAAGCAGCGGCAGATGGACCTCGAGCGTTTACTGCAAAG
GTACAGTTATCCTTGACGTCGAAGATACAATCTATCGTCGCTGACGATGT
TATCATGTGTCGGCGTGACTCGTCAACCGTTTTGAGCCGGTGTCAAGATG
TCCTTGAACAACCGGATGACGACGTCTAGATGGTGTCGATACTCAACGCC
AGGCGACCCTCTGTTCATCACATCGACACGGTATAAATCTAGCGGCACAA
CTGATACGGGTGTCGCCACATTTACGGATGTATTGCCGGCCAACATCTCA
TCTCGCGTGCCCGGATGAATCGACACCGAAACCCGCGCGCACGCCCTGGT
TCTACCCGATACGGCTCGGACCTATAACTGGATCAAACATAATAAATGCC
CGCAATAATTTGACAAACGCAGTGTGCCCGTCGGAATCATTCAACAGGTA
TCAGAACGTGAAATCAGAGCTCGAGGCCCAGCAGAAACTCGAAAGGATCC
GCGCGGAGCGGCAGTCCTCCTCGATCGGGCGCGTATCAGCGCCGGCGGTG
CACAAGAAGGCCACCGGGAGGCACTCGGCAACCGGGGGTGGGGGTGCCAG
GGGCGGCCGACGAAGCAGTAAGCACGGAGCTTGACGGCGATGTGCCGCCT
CCAAACGCGACAGTTGTCTTGTTTGGCTCACATTGATTGTTGGTGTGAAC
CCCATCGATTGTGAGGAGGGCTAGTGGCAAGCTCGATAGCTTTTGCCCAG
AGCCCATAGAATGAAGTGAAGTGGCGCACTTGGTTAAACAGAGAGGTGTT
GGGGACATTCCACAAAGTGTCCTGGTAGTGTAGGACAAGACAGATGGAAC
ACCATTTCTAGTGAGGTCGTTTTTCGGCGTTAGCATTGGGGTTGGTTGAT
CTTCTGGCTTGATGAAGGATGTGCTATGCATAGGAATGACACCAAATCGC
ATCTGAAGCGTCGAGTACTATTCGACGGGCTCACGTAAGGGCGGGGGAGT
GCCTTTTATGGCTTTTTTCGCAGAGCCAAGAAGCCAGAAGGGAGTGGACG
TGCAATAATAATTGTTTTGTTGGATATCACCTCGAACATTGGGGTTGCCG
CGTCCACTGCCCCGTGCCTTCGGCGCTGTGGCATCATCATCGCTTGAGAG
ACCCGACCCGGTCATGTGGGAGAGAATTTCCTCGTGGGTGGCAGAGGTAC
AGAAACCTTGCGTCTTTCAATCCATCCCTGGTTGGCCAGGCGAGTCTCCC
GCGGCGACGATGAGATGTTTGCGCTTTCAGCGGATTTGATACTTGGTTCG
TTTGGTGTCGTCGCCGGCCCGATTGTATGCGTGTGAGCCGACCTGGTCAT
GCGCCAACAAGCCCGCTGCGTCTTATCGCCTCAAACAAATCGTGGCTTGA
TGATAGCCAAATGTGGTACTATTACAAGGGCTAGG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1200:10978..16212-

>mRNA_E-fasciculatus_F_contig1200.1560.1 ID=mRNA_E-fasciculatus_F_contig1200.1560.1|Name=mRNA_E-fasciculatus_F_contig1200.1560.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1686bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1200:10978..16212- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGAAGTGACAGAGGACTCTGCGGTGAAGGACTTCCTAGAGATACTTGA
GATGGAAGTGACAGAGGACTCTGCGGTGAAGGACTTCCTAGAGATACTTG
AGGAGCACCGGCGCAACTGCGAGCGGCAAGGCAAGTATGTGGAGGCGGAG
ATCGCGAAGAACCGGTTGGACGAGCTCAAGCTTCACGAGGAAAACAGAAG
AAAGGCAAGGAAGCTAACAGAGCACCGGCGCAACTGCGAGCGGCAAGGCA
AGTATGTGGAGGCGGAGATCGCGAAGAACCGGTTGGACGAGCTCAAGCTT
CACGAGGAAAACAGAAGAAAGGCAAGGAAGCTAACAGAGGCGATGCGTTC
GAGGCAAATCGCGGAGAGGCTAGGGGTGGAGGAGGCTCACATGCTCGAGT
TCCAGCAGTTCAACATGGTCTGGGACAAGAGGATGGCAGACTATGAGCAC
CATGCCGAAGACATGGTGTTCGCAATGAGGGAGGCGATGCGTTCGAGGCA
AATCGCGGAGAGGCTAGGGGTGGAGGAGGCTCACATGCTCGAGTTCCAGC
AGTTCAACATGGTCTGGGACAAGAGGATGGCAGACTATGAGCACCATGCC
GAAGACATGGTGTTCGCAATGAGGGAGAGACACGGCTCTGAGCTTCGTGA
CTATCAGCGGAGGCTGTTGCAGGCCCAGCCCCGCCCAAAGTTCAGCCGTG
AGCTCCTGGACCTTCGACGTATACAGGAGAGACACGGCTCTGAGCTTCGT
GACTATCAGCGGAGGCTGTTGCAGGCCCAGCCCCGCCCAAAGTTCAGCCG
TGAGCTCCTGGACCTTCGACGTATACAGGAGCACCTAGCCAAGGCCAAAG
ACTACGCGGAGGCCCACAAGATGAAGCTCAAGTCGGACGCCCTCGAAGCC
TGGGAGCTGGAGCAATGGAGAAACAAGAGGCAGGCCGACTTGTGCCAACG
GGAAAGCAAGTTTAAGCACGGAAAGGCGCAGGAGCACCTAGCCAAGGCCA
AAGACTACGCGGAGGCCCACAAGATGAAGCTCAAGTCGGACGCCCTCGAA
GCCTGGGAGCTGGAGCAATGGAGAAACAAGAGGCAGGCCGACTTGTGCCA
ACGGGAAAGCAAGTTTAAGCACGGAAAGGCGCAGGAAATGGCGGCGCTAC
TCCAGCGGGTAATGGCAGGTCGAGAGGAGCAAAAGAAGCAGCGGCAGATG
GACCTCGAGCGTTTACTGCAAAGGAAATGGCGGCGCTACTCCAGCGGGTA
ATGGCAGGTCGAGAGGAGCAAAAGAAGCAGCGGCAGATGGACCTCGAGCG
TTTACTGCAAAGGTATCAGAACGTGAAATCAGAGCTCGAGGCCCAGCAGA
AACTCGAAAGGATCCGCGCGGAGCGGCAGTCCTCCTCGATCGGGCGCGTA
TCAGCGCCGGCGGTGCACAAGAAGGCCACCGGGAGGCACTCGGCAACCGG
GGGTGGGGGTGCCAGGGGCGGCCGACGAAGCAGTAAGCACGGAGCTTGAG
TATCAGAACGTGAAATCAGAGCTCGAGGCCCAGCAGAAACTCGAAAGGAT
CCGCGCGGAGCGGCAGTCCTCCTCGATCGGGCGCGTATCAGCGCCGGCGG
TGCACAAGAAGGCCACCGGGAGGCACTCGGCAACCGGGGGTGGGGGTGCC
AGGGGCGGCCGACGAAGCAGTAAGCACGGAGCTTGA
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