prot_E-fasciculatus_F_contig12.1553.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12.1553.1
Unique Nameprot_E-fasciculatus_F_contig12.1553.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length183
Homology
BLAST of mRNA_E-fasciculatus_F_contig12.1553.1 vs. uniprot
Match: D7G7I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I1_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 1.400e-90
Identity = 159/181 (87.85%), Postives = 163/181 (90.06%), Query Frame = 0
Query:    1 MSTAASRAGGSSSGAKATPATNQRAVDFRRQLDAHTRTLVESFGGLVRLAKITNPQGTAREDFQVNVATASLATAGEGLLGQIRELKLAVMLQDEAAMDLEVDQALAKIASEREELEKELEALSNDLKGAYAKAAMAGGGDAQDLPATV--MEGVVSSLSGMDVVAEKQMDAMEKAGDEEG 179
            MSTAASRAGGSSSGA  TPA NQRAVDFRRQLDAHTRTLVESFGGLVRLAKITNPQ T RE+FQVNVATASLATAGEGLL QIRELKLAVMLQDEAAMDLEVDQALAKIASEREELEKELEALSNDLKGAYAKAAMAGGGDA    ATV  +EGVVSS SGMDVV E+Q DAM  A +EEG
Sbjct:    1 MSTAASRAGGSSSGA--TPAVNQRAVDFRRQLDAHTRTLVESFGGLVRLAKITNPQSTEREEFQVNVATASLATAGEGLLRQIRELKLAVMLQDEAAMDLEVDQALAKIASEREELEKELEALSNDLKGAYAKAAMAGGGDADSSSATVTGVEGVVSSFSGMDVVGERQGDAMGNAAEEEG 179          
BLAST of mRNA_E-fasciculatus_F_contig12.1553.1 vs. uniprot
Match: A0A6H5JD54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD54_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 1.760e-62
Identity = 117/149 (78.52%), Postives = 125/149 (83.89%), Query Frame = 0
Query:   31 QLDAHTRTLVESFGGLVRLAKITNPQGTAREDFQVNVATASLATAGEGLLGQIRELKLAVMLQDEAAMDLEVDQALAKIASEREELEKELEALSNDLKGAYAKAAMAGGGDAQDLPATVMEGVVSSLSGMDVVAEKQMDAMEKAGDEEG 179
            +LDAHTRTLVESFGGLVRLAKITNPQ T RE+FQVNVATASLATAGEGLL QIRELKLAVMLQDEAAMDLEVDQALAKIA+ER+ELEKELEALSN+LKGAYAKAAMAGGGDA    ATV             V ++Q DAM KA +EEG
Sbjct:   83 RLDAHTRTLVESFGGLVRLAKITNPQSTEREEFQVNVATASLATAGEGLLRQIRELKLAVMLQDEAAMDLEVDQALAKIATERKELEKELEALSNELKGAYAKAAMAGGGDADSSSATVTG-----------VEKRQGDAMGKAAEEEG 220          
BLAST of mRNA_E-fasciculatus_F_contig12.1553.1 vs. uniprot
Match: A0A835Z826_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z826_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 4.390e-17
Identity = 48/113 (42.48%), Postives = 71/113 (62.83%), Query Frame = 0
Query:   19 PATNQRAVDFRRQLDAHTRTLVESFGGLVRLAKITNPQGTAREDFQVNVATASLATAGEGLLGQIRELKLAVMLQDEAAMDLEVDQALAKIASEREELEKELEALSNDLKGAY 131
            P  + RA DFRR  D + R+LVE+FG L+RL+KI++ Q    E  Q++ A+ +L TAGE +L  I+ELKL+++LQD  AMD EVD   A+       L  ++  L+  ++ AY
Sbjct:   39 PPVSGRAHDFRRACDRNARSLVENFGALIRLSKISDAQHMTHEGLQIDTASTALVTAGETMLRLIQELKLSILLQDFEAMDDEVDAVEAECRRAGRRLVGDIVELTESVQLAY 151          
BLAST of mRNA_E-fasciculatus_F_contig12.1553.1 vs. uniprot
Match: A0A7S2UVX4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVX4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 9.470e-13
Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 0
Query:   26 VDFRRQLDAHTRTLVESFGGLVRLAKITNPQGTAREDFQVNVATASLATAGEGLLGQIRELKLAVMLQDEAAMDLEVDQALAKIASEREELEKELEALSNDLKGAY 131
            ++F RQLDA+   LVE++GG+++ AK+ +      +  Q+   T S+  A E L+GQ+RELKLA+ LQD  A++ +   A A +       +  +E L   LK AY
Sbjct:    6 LNFHRQLDANIARLVEAYGGMIQSAKVGDKTRLHLDALQLTSHTISIEQAAESLIGQVRELKLALALQDAEALEADAQHARATLEERYNGSKNHVEELREQLKAAY 111          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12.1553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G7I1_ECTSI1.400e-9087.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD54_9PHAE1.760e-6278.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z826_9STRA4.390e-1742.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UVX4_9STRA9.470e-1336.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..133
IPR009332Mediator of RNA polymerase II transcription subunit 22PFAMPF06179Med22coord: 31..127
e-value: 8.4E-13
score: 48.5
IPR009332Mediator of RNA polymerase II transcription subunit 22PANTHERPTHR12434FAMILY NOT NAMEDcoord: 11..128
IPR038427MED22 superfamilyGENE3D1.20.58.1600coord: 16..135
e-value: 3.2E-16
score: 61.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12contigE-fasciculatus_F_contig12:26875..31308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12.1553.1mRNA_E-fasciculatus_F_contig12.1553.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12 26673..32062 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12.1553.1 ID=prot_E-fasciculatus_F_contig12.1553.1|Name=mRNA_E-fasciculatus_F_contig12.1553.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=183bp
MSTAASRAGGSSSGAKATPATNQRAVDFRRQLDAHTRTLVESFGGLVRLA
KITNPQGTAREDFQVNVATASLATAGEGLLGQIRELKLAVMLQDEAAMDL
EVDQALAKIASEREELEKELEALSNDLKGAYAKAAMAGGGDAQDLPATVM
EGVVSSLSGMDVVAEKQMDAMEKAGDEEGAAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038427MED22_sf
IPR009332Med22