mRNA_E-fasciculatus_F_contig11995.1549.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11995.1549.1 vs. uniprot
Match: D7G5U2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5U2_ECTSI) HSP 1 Score: 442 bits (1138), Expect = 4.080e-152 Identity = 221/233 (94.85%), Postives = 222/233 (95.28%), Query Frame = 1
Query: 1 AQVNQHSRQPGSGQQDAGGLLLQSGHHGVRPPIDARKTSVRSRIGRGGXXXXVGVADELGRGSKILAWYMLLLVYAYLFWLAGQRVNYALVHVENKFDVARTLGGALMCLTVPLATYQQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQ 699
AQVNQHSRQPGSGQQ+AGGLLLQS HHG RPPIDARKTSVRSRI G GVADELGRGSKILAWYMLLLVYAYLFWLAGQRVNYALVHVENKFDVARTLGGALMCLTVPLATYQ IVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQ
Sbjct: 2 AQVNQHSRQPGSGQQEAGGLLLQSAHHGARPPIDARKTSVRSRISGGSGSGGAGVADELGRGSKILAWYMLLLVYAYLFWLAGQRVNYALVHVENKFDVARTLGGALMCLTVPLATYQ-IVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQ 233
BLAST of mRNA_E-fasciculatus_F_contig11995.1549.1 vs. uniprot
Match: K8Z680_NANGC (Transmembrane protein 184c n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z680_NANGC) HSP 1 Score: 147 bits (372), Expect = 4.100e-39 Identity = 69/151 (45.70%), Postives = 103/151 (68.21%), Query Frame = 1
Query: 247 GQRVNYALVHVENKFDVARTLGGALMCLTVPLATYQQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQ 699
G +VN+ L + +K ++A T+GGA + TVP++ +Q I HLSNFVEP+QQ+ ++R++ MVP Y++ ++ SLR+ SL+ VR+ YE+YVIY F+ +L+ +G +L P V+GRH+ PFCCL PW MG EFL+RC+ GV Q
Sbjct: 26 GIQVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQ-IFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEAQLIR-KLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQ 174
BLAST of mRNA_E-fasciculatus_F_contig11995.1549.1 vs. uniprot
Match: A0A4D9DA43_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA43_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.850e-38 Identity = 72/159 (45.28%), Postives = 107/159 (67.30%), Query Frame = 1
Query: 223 YAYLFWLAGQRVNYALVHVENKFDVARTLGGALMCLTVPLATYQQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQ 699
Y +LA Q+VN+ L + +K ++A T+GGA + TVP++ +Q I HLSNFVEP+QQ+ ++R++ MVP Y++ ++ SLR+ SL+ VR+ YE+YVIY F+ +L+ +G +L P V+GRH+ PFCCL PW MG EFL+RC+ GV Q
Sbjct: 71 YVCFIFLAVQQVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQ-IFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEEQLIR-KLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQ 227
BLAST of mRNA_E-fasciculatus_F_contig11995.1549.1 vs. uniprot
Match: A0A7S2R496_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R496_9STRA) HSP 1 Score: 147 bits (370), Expect = 2.860e-38 Identity = 77/142 (54.23%), Postives = 97/142 (68.31%), Query Frame = 1
Query: 283 NKFDVARTLGGALMCLTVPLAT---YQQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQ 699
K ++A T+GGA + LTVPLA +Q HL++FVEPRQQ+Q VRI++ VP Y+ TA+L LRF ++I +R+ YEAYVIYCFL +LV LGD RLA P VVG H PPFCCL PW MG EFL++C+ GV Q
Sbjct: 92 GKHEIACTIGGAFVLLTVPLALGLCFQ----HLTHFVEPRQQAQAVRIIWTVPVYATTAWLCLRFPGHVIYIQCLREVYEAYVIYCFLQYLVHYLGDVHGDLAPRLALKPAVVGHHRPPFCCLPPWVMGGEFLEKCRFGVLQ 229
BLAST of mRNA_E-fasciculatus_F_contig11995.1549.1 vs. uniprot
Match: W7U0S2_9STRA (Signal recognition particle-docking protein FtsY n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0S2_9STRA) HSP 1 Score: 150 bits (380), Expect = 4.260e-38 Identity = 72/159 (45.28%), Postives = 107/159 (67.30%), Query Frame = 1
Query: 223 YAYLFWLAGQRVNYALVHVENKFDVARTLGGALMCLTVPLATYQQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQ 699
Y +LA Q+VN+ L + +K ++A T+GGA + TVP++ +Q I HLSNFVEP+QQ+ ++R++ MVP Y++ ++ SLR+ SL+ VR+ YE+YVIY F+ +L+ +G +L P V+GRH+ PFCCL PW MG EFL+RC+ GV Q
Sbjct: 613 YVCFIFLAVQQVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQ-IFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEAQLIR-KLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQ 769
BLAST of mRNA_E-fasciculatus_F_contig11995.1549.1 vs. uniprot
Match: A0A835YQ95_9STRA (Organic solute transporter Ostalpha-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ95_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.180e-35 Identity = 77/144 (53.47%), Postives = 102/144 (70.83%), Query Frame = 1
Query: 169 DELGRGSKILA---WYMLLLVYAYLFWLAGQRVNYALVHVENKFDVARTLGGALMCLTVPLATYQQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRL 591
+E G+ + A W+ L+++Y Y+ + +++ L ++ +DVA T+GGAL CLTVPLA Y +VLHL+NFVEPRQQSQIVRI+FMVP YSVTA+LSL W+L ITTVR+CYEAYVIYCFL FL+ + L A +L
Sbjct: 161 EEHGQPEAVKAAIRWWGLVVLYFYVAVMLAWKIDTMLAVADSHYDVAGTVGGALTCLTVPLAVYL-MVLHLTNFVEPRQQSQIVRIIFMVPVYSVTAYLSLLHPQWALSITTVRECYEAYVIYCFLQFLIIRVASTLVALYVQL 303
BLAST of mRNA_E-fasciculatus_F_contig11995.1549.1 vs. uniprot
Match: A0A7S3MIN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MIN9_9STRA) HSP 1 Score: 121 bits (303), Expect = 6.630e-29 Identity = 60/165 (36.36%), Postives = 103/165 (62.42%), Query Frame = 1
Query: 211 LLLVYAYLFWLAGQRVNYALVHVENKFDVARTLGGALMCLTVPLATYQQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGD--GLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQ 699
L++ Y +F L R+ + H + + + +++ +T+PL+ + HL+NF +P+ QSQIVRI++MVP + + ++ S+ F+ +++ +R+ YEAYVI+CF+ ++ +G+ G + +RL P +G H PPFCCL PWQMG EF+ +C+ GVFQ
Sbjct: 16 LVIGYFVVFLLTSIRLYNCVQHCVDLNTILTEVTQSMVVVTIPLSLFHMWD-HLTNFCKPKLQSQIVRIIWMVPIFCMESYFSITFVKQAMYFQAMRELYEAYVIHCFMRLILQYMGEESGGQSVAARLETYPASMGVHKPPFCCLSPWQMGSEFVIKCKTGVFQ 179
BLAST of mRNA_E-fasciculatus_F_contig11995.1549.1 vs. uniprot
Match: A0A0R3XDK9_HYDTA (Uncharacterized protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3XDK9_HYDTA) HSP 1 Score: 115 bits (287), Expect = 2.270e-28 Identity = 57/139 (41.01%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 283 NKFDVARTLGGALMCLTVPLATYQQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQ 699
+ AR +GG + +P++ + I+ HL ++ +P Q I+RI++MVP Y+V A+ +LRF ++++ T+R+CYEAY IY FL FL+ L N+ LA + V +H+ PFCCL+PWQMGR F++ C+ GV Q
Sbjct: 36 SSMTFARFIGGVFVLGAIPISIWT-ILEHLISYTKPYLQLHIIRILWMVPIYAVNAWFALRFPKYAIYFDTLRECYEAYAIYNFLAFLLNYLRRKDANLNNHLATVTQV--KHIIPFCCLKPWQMGRPFIEHCRHGVLQ 171
BLAST of mRNA_E-fasciculatus_F_contig11995.1549.1 vs. uniprot
Match: A0A2P2I693_9CRUS (Transmembrane protein 184C-like n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2I693_9CRUS) HSP 1 Score: 119 bits (299), Expect = 5.660e-28 Identity = 62/139 (44.60%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 283 NKFDVARTLGGALMCLTVPLATYQQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQ 699
NKF A +GG + LT+P++ +Q I HL N+ +P+ Q I+RI++MVP Y++ ++L LRF SL++ T R+CYEAYVIY F+ FL+ L D + + L P H P CCL+PW MGREF+ RC+ G+ Q
Sbjct: 49 NKFQFAWLVGGLFVFLTIPISLWQ-ITHHLVNYTKPKLQKHIIRILWMVPVYALDSWLVLRFPSLSLYLDTARECYEAYVIYNFMMFLLNFL-DQMVELDVVLDLKPQT--NHFFPLCCLKPWPMGREFIHRCKHGILQ 183
BLAST of mRNA_E-fasciculatus_F_contig11995.1549.1 vs. uniprot
Match: A0A8C4R795_EPTBU (Uncharacterized protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4R795_EPTBU) HSP 1 Score: 115 bits (289), Expect = 7.510e-28 Identity = 58/145 (40.00%), Postives = 90/145 (62.07%), Query Frame = 1
Query: 268 LVHVENKFDVART-LGGALMCLTVPLATYQQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQ 699
L+H + + V + + LT+P++ + I+ H+ N+ +P Q I+RI++MVP YS+ ++L+LRF S++I T R+CYEA+VIY F+ +L+ L + P S L + P +H+PPFCC PW MGR L RC+ GV Q
Sbjct: 33 LIHRQKQAKVLTWFIAMVFVFLTLPISLWD-IIHHILNYTQPHLQRHIIRILWMVPIYSLDSWLALRFASVSIYINTCRECYEAFVIYSFMAYLLSYLEERFPHLESTLESRP--TPQHLPPFCCCPPWMMGRVLLSRCKLGVLQ 174 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11995.1549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11995.1549.1 >prot_E-fasciculatus_F_contig11995.1549.1 ID=prot_E-fasciculatus_F_contig11995.1549.1|Name=mRNA_E-fasciculatus_F_contig11995.1549.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=233bp AQVNQHSRQPGSGQQDAGGLLLQSGHHGVRPPIDARKTSVRSRIGRGGGGback to top mRNA from alignment at E-fasciculatus_F_contig11995:623..4075- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11995.1549.1 ID=mRNA_E-fasciculatus_F_contig11995.1549.1|Name=mRNA_E-fasciculatus_F_contig11995.1549.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3453bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11995:623..4075- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11995:623..4075- >mRNA_E-fasciculatus_F_contig11995.1549.1 ID=mRNA_E-fasciculatus_F_contig11995.1549.1|Name=mRNA_E-fasciculatus_F_contig11995.1549.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1398bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11995:623..4075- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |