prot_E-fasciculatus_F_contig1199.1547.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1199.1547.1
Unique Nameprot_E-fasciculatus_F_contig1199.1547.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length280
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1199.1547.1 vs. uniprot
Match: D8LQ85_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ85_ECTSI)

HSP 1 Score: 519 bits (1337), Expect = 4.490e-183
Identity = 272/283 (96.11%), Postives = 275/283 (97.17%), Query Frame = 0 
Query:    1 MSETSAAKL-ATGSSAAPPAT--PTKRKKTFKRALKGTVGVGLAAASAALIARSDDIGEWLQSVAPHVLPHTVVVPGGADAAVLADFVLRAIAEAKSCVQEGVNVCLDAEGRVTALYTFISQWYLSPRQHVVEMALSILVLSPLVYLYYKLCRARLRLKRAAGAFDAKRPSLLMKLWGAALLGLVGAGAFLKFTKQELISHPAYLWQPCHVHSLVMGLCAFVETEGSLLVMHVATTLWWGPFLAFVAPSLPTDPVEIAIFWAQHALMLLAPFLRLTVGTRWLY 280
            MSETSAAKL ATGSSAAP A   P  ++KTFKRALKGTVGVGLAAASAALIARSDDIGEWLQSVAPHVLPHTVVVPGGAD AVLADFVLRAIAEAKSCVQEGVNVCLDAEGRVTALYTFISQWYLSPRQHVVEMALSILVLSPLVYLY+KLCRARLRLKRAAGAFDAKRPSLLMKLWGAALLGLVGAGAFLKFTKQELISHPAYLWQPCHVHSLVMGLCAFVETEGSLLVMHVATTLWWGPFLAFVAPSLPTDPVEIAIFWAQHALMLLAPFLRLTVGTRWLY
Sbjct:    1 MSETSAAKLRATGSSAAPSAAAAPATKRKTFKRALKGTVGVGLAAASAALIARSDDIGEWLQSVAPHVLPHTVVVPGGADTAVLADFVLRAIAEAKSCVQEGVNVCLDAEGRVTALYTFISQWYLSPRQHVVEMALSILVLSPLVYLYFKLCRARLRLKRAAGAFDAKRPSLLMKLWGAALLGLVGAGAFLKFTKQELISHPAYLWQPCHVHSLVMGLCAFVETEGSLLVMHVATTLWWGPFLAFVAPSLPTDPVEIAIFWAQHALMLLAPFLRLTVGTRWLY 283
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BLAST of mRNA_E-fasciculatus_F_contig1199.1547.1 vs. uniprot
Match: A0A835Z0S0_9STRA (TMEM164 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S0_9STRA)

HSP 1 Score: 163 bits (413), Expect = 7.030e-45
Identity = 90/229 (39.30%), Postives = 124/229 (54.15%), Query Frame = 0 
Query:   52 DDIGEWLQSVAPHVLPHTVVVPGGADAAVLADFVLRAIAEAKSCVQEGVNVCLDAEGRVTALYTFISQWYLSPRQHVVEMALSILVLSPLVYLYYKLCRARLRLKRAAGAFDAKRPSLLMKLWGAALLGLVGAGAFLKFTKQELISHPAYLWQPCHVHSLVMGLCAFVETEGSLLVMHVATTLWWGPFLAFVAPSLPTDPVEIAIFWAQHALMLLAPFLRLTVGTRWLY 280
            D  G  L  +APHV  HT    G +         L   ++     + GVN    A         ++S WY++P+QH++E  +S++VL+PLV  YY+ C   LR        + KR  +L K+WG  LL  V    + K+    + SHPAYL QPCHVHS+ M L AF +   S  ++HV+ TLWWGPFLAFVAP LP   +E+ +FW QH LML     R+  G+ W+Y
Sbjct:    8 DPAGRALVRLAPHVQCHTNTHDGVSW--------LNGWSDIGVSCRSGVNHPDSA---------YLSAWYITPQQHIIETIVSLVVLAPLVGFYYRKCSEGLRAHAVQDRTEKKRFPVLQKVWGGLLLLSVVLQVWFKWNYNHVSSHPAYLAQPCHVHSVAMALTAFSDASWSRGLLHVSATLWWGPFLAFVAPDLPASALEVVVFWIQHTLMLCIIIARVLTGSNWMY 219
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BLAST of mRNA_E-fasciculatus_F_contig1199.1547.1 vs. uniprot
Match: A0A7S2V140_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V140_9STRA)

HSP 1 Score: 115 bits (287), Expect = 4.800e-27
Identity = 59/150 (39.33%), Postives = 81/150 (54.00%), Query Frame = 0 
Query:  120 WYLSPRQHVVEMALSILVLSPLVYLYYKLCRARLRLKRAAGAFDA---KRPSLLMKLWGAALLGLVGAGAFLKFTKQELISHPAYLWQPCHVHSLVMGLCAFVE-TEGSLLVMHVATTLWWGPFLAFVAPSLPTDPVEIAIFWAQHALML 265
            W+LSP  HV+E   S++V +P++    K C   LR + A    +     +P LL K+W   LL +      LK+      SHPAYL QPCH+ + +MGL  F   T  +  + HV  T WWGP LA VAP LP    E+ +F+ QH LM+
Sbjct:   81 WFLSPEHHVLEFLASLIVYTPILLFCLKQCAKSLRYQTALQQMEGITIPQPDLLQKVWAVVLLVIATLQIRLKYISLNPASHPAYLLQPCHITTFMMGLITFARPTMLTEALFHVVATTWWGPLLALVAPDLPASSFEVFLFYLQHYLMM 230
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1199.1547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQ85_ECTSI4.490e-18396.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0S0_9STRA7.030e-4539.30TMEM164 family-domain-containing protein n=1 Tax=T... [more]
A0A7S2V140_9STRA4.800e-2739.33Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026508Transmembrane protein 164PFAMPF14808TMEM164coord: 121..273
e-value: 1.9E-11
score: 43.8
IPR026508Transmembrane protein 164PANTHERPTHR20948UNCHARACTERIZEDcoord: 120..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 275..280
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 249..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 220..225
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 189..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 254..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..127
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 169..188
NoneNo IPR availableTMHMMTMhelixcoord: 254..276
NoneNo IPR availableTMHMMTMhelixcoord: 225..247
NoneNo IPR availableTMHMMTMhelixcoord: 32..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1199contigE-fasciculatus_F_contig1199:16066..19461 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1199.1547.1mRNA_E-fasciculatus_F_contig1199.1547.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1199 16051..19461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1199.1547.1 ID=prot_E-fasciculatus_F_contig1199.1547.1|Name=mRNA_E-fasciculatus_F_contig1199.1547.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=280bp
MSETSAAKLATGSSAAPPATPTKRKKTFKRALKGTVGVGLAAASAALIAR
SDDIGEWLQSVAPHVLPHTVVVPGGADAAVLADFVLRAIAEAKSCVQEGV
NVCLDAEGRVTALYTFISQWYLSPRQHVVEMALSILVLSPLVYLYYKLCR
ARLRLKRAAGAFDAKRPSLLMKLWGAALLGLVGAGAFLKFTKQELISHPA
YLWQPCHVHSLVMGLCAFVETEGSLLVMHVATTLWWGPFLAFVAPSLPTD
PVEIAIFWAQHALMLLAPFLRLTVGTRWLY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026508TMEM164