prot_E-fasciculatus_F_contig11986.1544.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11986.1544.1
Unique Nameprot_E-fasciculatus_F_contig11986.1544.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length38
Homology
BLAST of mRNA_E-fasciculatus_F_contig11986.1544.1 vs. uniprot
Match: D7G300_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G300_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.650e-7
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 0
Query:    1 VTSEDTDCIEEWQGNGWCEDINNTPSCSYDGGDV 34
              SE+  C+E+WQ +G+C+D+NN  SC YDGGDV
Sbjct:   87 AASEEEACVEDWQSDGFCDDVNNNYSCGYDGGDV 120          
BLAST of mRNA_E-fasciculatus_F_contig11986.1544.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 1.230e-6
Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 0
Query:    2 TSEDTDCIEEWQGNGWCEDINNTPSCSYDGGD 33
            T+E   C E W+G+ WC++INN PSC YDGGD
Sbjct:   54 TTEVATCEESWKGDSWCDEINNNPSCDYDGGD 85          
BLAST of mRNA_E-fasciculatus_F_contig11986.1544.1 vs. uniprot
Match: A0A6H5JRS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS7_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 1.530e-5
Identity = 17/28 (60.71%), Postives = 24/28 (85.71%), Query Frame = 0
Query:    6 TDCIEEWQGNGWCEDINNTPSCSYDGGD 33
            +DC+E+W G+G C+D+NN+  CSYDGGD
Sbjct:  175 SDCVEQWIGDGACDDMNNSAECSYDGGD 202          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11986.1544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G300_ECTSI1.650e-755.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7Z1_9PHAE1.230e-659.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRS7_9PHAE1.530e-560.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainPFAMPF00066Notchcoord: 6..33
e-value: 2.7E-4
score: 21.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11986contigE-fasciculatus_F_contig11986:3694..3807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11986.1544.1mRNA_E-fasciculatus_F_contig11986.1544.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11986 3694..3807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11986.1544.1 ID=prot_E-fasciculatus_F_contig11986.1544.1|Name=mRNA_E-fasciculatus_F_contig11986.1544.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=38bp
VTSEDTDCIEEWQGNGWCEDINNTPSCSYDGGDVSVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom