prot_E-fasciculatus_F_contig11964.1533.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11964.1533.1
Unique Nameprot_E-fasciculatus_F_contig11964.1533.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length373
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11964.1533.1 vs. uniprot
Match: D8LIM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM1_ECTSI)

HSP 1 Score: 515 bits (1326), Expect = 8.380e-182
Identity = 276/328 (84.15%), Postives = 281/328 (85.67%), Query Frame = 0 
Query:   48 MESDLDFIRELTRYRSGAERAAKNDEYEFALVLNPNDEYRDAVEVLELALDLGDGGGGVTTSPQKLDKAKRVRESLGGLQEQHQPQQHSSPDRSGASDSPAGLSTSQSGPGSGRKGGAGPPLVRPGLSEGLEGVGGGRRTRLSLLDDLQEEEGRLTSRRKKELERKKKHRLFHFVDTMKQGVIVRRHLAHRTCDQIVLQSTDDCRTISWKPLLAADGGASGGGG-AMSGLFQSLRRGAAGSRLSK-NRAECVKTAHIAVVLPATDPDPSQPGFFGTRALRLSEDIPNPSRTFSLLYGDWGRGHCGMEDQVQGTLDLECPDDGMYAMLF 373
            MESDLDFIRELTRYRSGAERAA+NDEYEFALVLNPNDEYRDAVEVLELALDLGDGGGGVTTSPQKLDK KR                                    SGPGSGRKGG GPP+VRPGLSEGLEGVGGGRRTRLSLLDDLQEEEGRLTSRRKKELERKKKHRLFHFV  M++GVIVRRHLAHRTCDQIVLQSTDDCRTISWKPLLAADGGA      A+SGLFQSLRRGAAGSRLSK NRAECVKTAHIAVVLPATDPDPSQPGFFGTRALRLSEDIPNPSRTFSLLYGDWGRGHCGMEDQVQGTLDLECPDDGMYAMLF
Sbjct:    1 MESDLDFIRELTRYRSGAERAARNDEYEFALVLNPNDEYRDAVEVLELALDLGDGGGGVTTSPQKLDKVKR------------------------------------SGPGSGRKGGGGPPVVRPGLSEGLEGVGGGRRTRLSLLDDLQEEEGRLTSRRKKELERKKKHRLFHFVHKMQEGVIVRRHLAHRTCDQIVLQSTDDCRTISWKPLLAADGGAXXXXXXAISGLFQSLRRGAAGSRLSKKNRAECVKTAHIAVVLPATDPDPSQPGFFGTRALRLSEDIPNPSRTFSLLYGDWGRGHCGMEDQVQGTLDLECPDDGMYAMLF 292
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11964.1533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIM1_ECTSI8.380e-18284.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 192..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11964contigE-fasciculatus_F_contig11964:3..4201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11964.1533.1mRNA_E-fasciculatus_F_contig11964.1533.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11964 3..4201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11964.1533.1 ID=prot_E-fasciculatus_F_contig11964.1533.1|Name=mRNA_E-fasciculatus_F_contig11964.1533.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=373bp
QQQQQQQQQQQQQQQQQRFSSQRGSSFKVKSGGGGSPVVVGGGHEDAMES
DLDFIRELTRYRSGAERAAKNDEYEFALVLNPNDEYRDAVEVLELALDLG
DGGGGVTTSPQKLDKAKRVRESLGGLQEQHQPQQHSSPDRSGASDSPAGL
STSQSGPGSGRKGGAGPPLVRPGLSEGLEGVGGGRRTRLSLLDDLQEEEG
RLTSRRKKELERKKKHRLFHFVDTMKQGVIVRRHLAHRTCDQIVLQSTDD
CRTISWKPLLAADGGASGGGGAMSGLFQSLRRGAAGSRLSKNRAECVKTA
HIAVVLPATDPDPSQPGFFGTRALRLSEDIPNPSRTFSLLYGDWGRGHCG
MEDQVQGTLDLECPDDGMYAMLF
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