mRNA_E-fasciculatus_F_contig11957.1527.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11957.1527.1
Unique NamemRNA_E-fasciculatus_F_contig11957.1527.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11957.1527.1 vs. uniprot
Match: D7FLD0_ECTSI (Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD0_ECTSI)

HSP 1 Score: 441 bits (1133), Expect = 8.770e-152
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 1 
Query:    1 AASIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDGNQPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE 657
            AASIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDG QPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE
Sbjct:  159 AASIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDGTQPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE 377
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11957.1527.1 vs. uniprot
Match: A0A6A3YFJ2_9STRA (Glucose-6-phosphate 1-dehydrogenase n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YFJ2_9STRA)

HSP 1 Score: 294 bits (753), Expect = 4.560e-94
Identity = 140/217 (64.52%), Postives = 169/217 (77.88%), Query Frame = 1 
Query:    7 SIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDGNQPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE 657
            SIKQV L++ G+ RL+VEKPFGHD DS  KL+ D+GA + E  +YRIDHYLGKEM QNLLVLRF NT+FEPIWNR+ V SVT TFKE+ GT+GRGGYFD YGIIRDV+QNHL+QV +L+AME P+  +G   ++Y+RD KV VL  IEP++ EN VLGQY G  + N+PGY +D  VP  S TPTFAT +++V N RW GVPFI KAGKALNE K E
Sbjct:  184 SIKQVALTSRGWNRLIVEKPFGHDLDSFNKLSQDMGALYGEDEIYRIDHYLGKEMVQNLLVLRFGNTIFEPIWNRNYVSSVTITFKEDIGTQGRGGYFDSYGIIRDVMQNHLLQVLSLVAMEPPVLCAGKDYSNYIRDEKVKVLNCIEPIKLENTVLGQYEGDKERNEPGYLEDPTVPKGSVTPTFATAIMYVNNARWAGVPFIMKAGKALNERKGE 400
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11957.1527.1 vs. uniprot
Match: A0A662XCW7_9STRA (Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCW7_9STRA)

HSP 1 Score: 293 bits (750), Expect = 1.130e-93
Identity = 137/217 (63.13%), Postives = 170/217 (78.34%), Query Frame = 1 
Query:    7 SIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDGNQPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE 657
            SIK+  L+  G+ RL+VEKPFGHD DS  KL+ D+GA + E  +YRIDHYLGKEM QNLLVLRF+NT+FEPIWNR+ + +VT TFKE+ GT+GRGGYFD YGIIRDV+QNHL+QV +L+AME P+  +G   ++Y+RD KV VL  IEP++ +N VLGQYLG  + N+PGY +D  VP+ S TPTFAT V++V N RW GVPFI KAGKALNE K E
Sbjct:  179 SIKKAALTTRGWNRLIVEKPFGHDLDSFNKLSHDMGALYSEDEIYRIDHYLGKEMVQNLLVLRFANTIFEPIWNRNYISNVTITFKEDIGTQGRGGYFDSYGIIRDVMQNHLLQVLSLVAMEPPVLAAGKDYSNYIRDEKVKVLNCIEPIKLDNTVLGQYLGDPERNEPGYLEDPTVPEGSVTPTFATTVMYVNNPRWSGVPFIMKAGKALNERKGE 395
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11957.1527.1 vs. uniprot
Match: F0WIH3_9STRA (Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Albugo TaxID=65356 RepID=F0WIH3_9STRA)

HSP 1 Score: 291 bits (745), Expect = 2.330e-93
Identity = 139/218 (63.76%), Postives = 166/218 (76.15%), Query Frame = 1 
Query:    4 ASIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDGNQPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE 657
            +SIKQ  LS TG+ RL+VEKPFGHD  S  KL+ D+ A + E   YRIDHYLGKEM QNLL++RF+NT+FEP+WNR  + SV  TFKE+ GT+GRGGYFD YGIIRDV+QNHL+QV +LIAME P++ SG   +DY+RD KV VL  I+P+     VLGQY G     QPGY +D  VPD+S TPTFATCVL +KN RW+GVPFI KAGKALNE KAE
Sbjct:  142 SSIKQSALSVTGWNRLIVEKPFGHDLTSFNKLSKDMSALYREDEFYRIDHYLGKEMVQNLLIMRFANTIFEPVWNRQYISSVLITFKEDIGTQGRGGYFDNYGIIRDVMQNHLLQVLSLIAMEPPVQASGDDHSDYIRDEKVKVLNCIDPIELNESVLGQYEGDSTFKQPGYTEDLTVPDNSITPTFATCVLKIKNARWEGVPFIMKAGKALNERKAE 359
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BLAST of mRNA_E-fasciculatus_F_contig11957.1527.1 vs. uniprot
Match: D0MT03_PHYIT (Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MT03_PHYIT)

HSP 1 Score: 291 bits (745), Expect = 6.330e-93
Identity = 139/217 (64.06%), Postives = 168/217 (77.42%), Query Frame = 1 
Query:    7 SIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDGNQPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE 657
            SIK+  L+  G+ RL+VEKPFGHD DS  KL+ D+GA + E  +YRIDHYLGKEM QNLLVLRF N +FEPIWNR+ V SVT TFKE+ GT+GRGGYFD +GIIRDV+QNHL+QV +L+AME PI+ +G   ++Y+RD KV VL  IEP++ EN VLGQY GS + N+PGY +D  VP  S TPTFAT V++V N RW GVPFI KAGKALNE K E
Sbjct:  179 SIKKAALTTRGWNRLIVEKPFGHDLDSFDKLSQDMGALYSEDEIYRIDHYLGKEMVQNLLVLRFGNAIFEPIWNRNYVSSVTITFKEDIGTQGRGGYFDSFGIIRDVMQNHLLQVLSLVAMEPPIQAAGDNYSNYIRDEKVKVLNCIEPIKIENTVLGQYEGSKELNEPGYLEDPTVPKGSVTPTFATAVMYVNNPRWSGVPFIMKAGKALNERKGE 395
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11957.1527.1 vs. uniprot
Match: A0A484DY36_BRELC (Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DY36_BRELC)

HSP 1 Score: 290 bits (741), Expect = 1.600e-92
Identity = 135/217 (62.21%), Postives = 170/217 (78.34%), Query Frame = 1 
Query:    7 SIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDGNQPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE 657
            SIK+  L+  G+ RL+VEKPFGHD  S  KL+ D+ A + E  +YRIDHYLGKEM QNLLVLRF NT+FEPIWNR+ + SVT TFKE+ GT+GRGGYFD +GIIRDV+QNHL+QV +L+AME P+  +G+  ++Y+RD KV VL  IEP++ EN VLGQY+G    N+PGY +D  VP+DS+TPTFAT +++V N+RW GVPFI KAGKALNE K E
Sbjct:  154 SIKKAALTTRGWNRLIVEKPFGHDLSSFDKLSRDMSALYCEDEIYRIDHYLGKEMVQNLLVLRFGNTIFEPIWNRNYISSVTITFKEDIGTQGRGGYFDSFGIIRDVMQNHLLQVLSLVAMEAPVYAAGNDYSNYIRDEKVKVLNCIEPIKLENTVLGQYIGDQTLNEPGYLEDPTVPNDSSTPTFATAIMYVNNKRWAGVPFIMKAGKALNERKGE 370
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11957.1527.1 vs. uniprot
Match: W2GCK2_PHYPR (Glucose-6-phosphate 1-dehydrogenase n=7 Tax=Phytophthora TaxID=4783 RepID=W2GCK2_PHYPR)

HSP 1 Score: 287 bits (735), Expect = 2.110e-91
Identity = 136/217 (62.67%), Postives = 167/217 (76.96%), Query Frame = 1 
Query:    7 SIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDGNQPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE 657
            SIK+  L+  G+ RL+VEKPFGHD DS  KL+ D+ A + E  +YRIDHYLGKEM QNLLVLRF N +FEPIWNR+ V SVT TFKE+ GT+GRGGYFD +GIIRDV+QNHL+QV +L+AME P++ +G   ++Y+RD KV VL  IEP++ EN VLGQY GS + N+PGY +D  VP  S TPTFAT +++V N RW GVPFI KAGKALNE K E
Sbjct:  181 SIKKAALTTRGWNRLIVEKPFGHDLDSFDKLSQDMSALYCEDEIYRIDHYLGKEMVQNLLVLRFGNAIFEPIWNRNYVSSVTITFKEDIGTQGRGGYFDSFGIIRDVMQNHLLQVLSLVAMEPPVQAAGHNYSNYIRDEKVKVLNCIEPIKLENTVLGQYEGSKERNEPGYLEDPTVPKGSVTPTFATAIMYVNNPRWSGVPFIMKAGKALNERKGE 397
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11957.1527.1 vs. uniprot
Match: A0A7S3XL23_HETAK (Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL23_HETAK)

HSP 1 Score: 287 bits (735), Expect = 2.110e-91
Identity = 143/220 (65.00%), Postives = 171/220 (77.73%), Query Frame = 1 
Query:    1 AASIKQVG-LSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDGNQPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE 657
            AA+IK  G +S TG+TRL+VEKPFGHD  SA +L   L AHFDESY+YRIDHYLGKEM QNLLV+RFSN M+E IWNR +VQSV  TFKE FGT+GRGGYFD  GIIRD++QNHLMQV TL+AME P+  +G  S + VRD KV VL++I P R E+ V+GQY  + DG++ GY +D  VP  S TPTFA  VL+V+N RW+GVPF+ KAGKALNE KAE
Sbjct:  170 AAAIKAGGGVSPTGWTRLIVEKPFGHDLASAQELAAGLNAHFDESYIYRIDHYLGKEMVQNLLVMRFSNIMWESIWNRTTVQSVLITFKEPFGTQGRGGYFDGSGIIRDIMQNHLMQVLTLVAMEPPVLCTGEASPNLVRDEKVKVLRSIPPARLEDTVVGQYAAAADGSEAGYLEDPTVPAGSRTPTFAQTVLYVQNPRWEGVPFVLKAGKALNERKAE 389
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11957.1527.1 vs. uniprot
Match: W2MTX2_PHYPR (Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2MTX2_PHYPR)

HSP 1 Score: 287 bits (735), Expect = 2.110e-91
Identity = 136/217 (62.67%), Postives = 167/217 (76.96%), Query Frame = 1 
Query:    7 SIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDGNQPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE 657
            SIK+  L+  G+ RL+VEKPFGHD DS  KL+ D+ A + E  +YRIDHYLGKEM QNLLVLRF N +FEPIWNR+ V SVT TFKE+ GT+GRGGYFD +GIIRDV+QNHL+QV +L+AME P++ +G   ++Y+RD KV VL  IEP++ EN VLGQY GS + N+PGY +D  VP  S TPTFAT +++V N RW GVPFI KAGKALNE K E
Sbjct:  181 SIKKAALTTRGWNRLIVEKPFGHDLDSFDKLSQDMSALYCEDEIYRIDHYLGKEMVQNLLVLRFGNAIFEPIWNRNYVSSVTITFKEDIGTQGRGGYFDSFGIIRDVMQNHLLQVLSLVAMEPPVQAAGHNYSNYIRDEKVKVLNCIEPIKLENTVLGQYEGSKERNEPGYLEDPTVPKGSVTPTFATAIMYVNNPRWSGVPFIMKAGKALNERKGE 397
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11957.1527.1 vs. uniprot
Match: A0A3M6VVN6_9STRA (Multifunctional fusion protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVN6_9STRA)

HSP 1 Score: 297 bits (760), Expect = 3.370e-91
Identity = 139/217 (64.06%), Postives = 172/217 (79.26%), Query Frame = 1 
Query:    7 SIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRIDHYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYFDRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIEPVRAENVVLGQYLGSDDGNQPGYKDDAGVPDDSNTPTFATCVLFVKNRRWDGVPFIFKAGKALNETKAE 657
            SIK+  L++ G+ RL+VEKPFGHD +S  KL+ D+GA ++E  +YRIDHYLGKEM QNLLVLRFSNT+FEPIWNR+ + SVT TFKE+ GTEGRGGYFD YGIIRDV+QNHL+QV +L+AME P+  +G+  ++Y+RD KV VL  IEP++ EN VLGQY G  + N+PGY DD  VP +S TPTFAT +++V N RW GVPFI KAGKALNE K E
Sbjct:  139 SIKKAALTSCGWNRLIVEKPFGHDLESFNKLSKDMGALYNEDEIYRIDHYLGKEMVQNLLVLRFSNTIFEPIWNRNYISSVTITFKEDIGTEGRGGYFDSYGIIRDVMQNHLLQVLSLVAMEPPVMAAGNNYSNYIRDEKVKVLNCIEPIKLENTVLGQYEGDKERNEPGYLDDPTVPKESVTPTFATAIMYVNNPRWSGVPFIMKAGKALNERKGE 355
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11957.1527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLD0_ECTSI8.770e-15299.54Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Ectoca... [more]
A0A6A3YFJ2_9STRA4.560e-9464.52Glucose-6-phosphate 1-dehydrogenase n=7 Tax=Phytop... [more]
A0A662XCW7_9STRA1.130e-9363.13Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Nothop... [more]
F0WIH3_9STRA2.330e-9363.76Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Albugo... [more]
D0MT03_PHYIT6.330e-9364.06Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Phytop... [more]
A0A484DY36_BRELC1.600e-9262.21Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Bremia... [more]
W2GCK2_PHYPR2.110e-9162.67Glucose-6-phosphate 1-dehydrogenase n=7 Tax=Phytop... [more]
A0A7S3XL23_HETAK2.110e-9165.00Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Hetero... [more]
W2MTX2_PHYPR2.110e-9162.67Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Phytop... [more]
A0A3M6VVN6_9STRA3.370e-9164.06Multifunctional fusion protein n=1 Tax=Peronospora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11957contigE-fasciculatus_F_contig11957:3..2971 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score441.4
Seed ortholog evalue2.4e-121
Seed eggNOG ortholog2880.D7FLD0
Preferred nameG6PD5
KEGG rclassRC00001,RC00066
KEGG koko:K00036
KEGG ReactionR00835,R02736,R10907
KEGG Pathwayko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230
KEGG ModuleM00004,M00006,M00008
GOsGO:0003674,GO:0003824,GO:0004345,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009507,GO:0009536,GO:0009987,GO:0010035,GO:0010038,GO:0016491,GO:0016614,GO:0016616,GO:0019318,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0046686,GO:0050896,GO:0051156,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564
EggNOG free text desc.glucose-6-phosphate dehydrogenase activity
EggNOG OGsCOG0364@1,KOG0563@2759
EC1.1.1.363,1.1.1.49
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons7
Model size661
Cds size660
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927704.953115-CDS-E-fasciculatus_F_contig11957:2..661622927704.953115-CDS-E-fasciculatus_F_contig11957:2..66Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 3..66 +
1695995658.2891624-CDS-E-fasciculatus_F_contig11957:2..661695995658.2891624-CDS-E-fasciculatus_F_contig11957:2..66Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 3..66 +
1622927704.9688284-CDS-E-fasciculatus_F_contig11957:683..7151622927704.9688284-CDS-E-fasciculatus_F_contig11957:683..715Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 684..715 +
1695995658.3049424-CDS-E-fasciculatus_F_contig11957:683..7151695995658.3049424-CDS-E-fasciculatus_F_contig11957:683..715Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 684..715 +
1622927704.9827368-CDS-E-fasciculatus_F_contig11957:1315..15241622927704.9827368-CDS-E-fasciculatus_F_contig11957:1315..1524Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 1316..1524 +
1695995658.3162024-CDS-E-fasciculatus_F_contig11957:1315..15241695995658.3162024-CDS-E-fasciculatus_F_contig11957:1315..1524Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 1316..1524 +
1622927705.000435-CDS-E-fasciculatus_F_contig11957:1807..18501622927705.000435-CDS-E-fasciculatus_F_contig11957:1807..1850Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 1808..1850 +
1695995658.3270512-CDS-E-fasciculatus_F_contig11957:1807..18501695995658.3270512-CDS-E-fasciculatus_F_contig11957:1807..1850Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 1808..1850 +
1622927705.014548-CDS-E-fasciculatus_F_contig11957:2217..22951622927705.014548-CDS-E-fasciculatus_F_contig11957:2217..2295Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 2218..2295 +
1695995658.3381517-CDS-E-fasciculatus_F_contig11957:2217..22951695995658.3381517-CDS-E-fasciculatus_F_contig11957:2217..2295Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 2218..2295 +
1622927705.031278-CDS-E-fasciculatus_F_contig11957:2504..26041622927705.031278-CDS-E-fasciculatus_F_contig11957:2504..2604Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 2505..2604 +
1695995658.351929-CDS-E-fasciculatus_F_contig11957:2504..26041695995658.351929-CDS-E-fasciculatus_F_contig11957:2504..2604Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 2505..2604 +
1622927705.0467236-CDS-E-fasciculatus_F_contig11957:2836..29701622927705.0467236-CDS-E-fasciculatus_F_contig11957:2836..2970Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 2837..2970 +
1695995658.364929-CDS-E-fasciculatus_F_contig11957:2836..29701695995658.364929-CDS-E-fasciculatus_F_contig11957:2836..2970Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11957 2837..2970 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11957.1527.1prot_E-fasciculatus_F_contig11957.1527.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11957 3..2970 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11957.1527.1

>prot_E-fasciculatus_F_contig11957.1527.1 ID=prot_E-fasciculatus_F_contig11957.1527.1|Name=mRNA_E-fasciculatus_F_contig11957.1527.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=220bp
AASIKQVGLSATGFTRLVVEKPFGHDYDSALKLTDDLGAHFDESYVYRID
HYLGKEMTQNLLVLRFSNTMFEPIWNRDSVQSVTFTFKENFGTEGRGGYF
DRYGIIRDVIQNHLMQVFTLIAMEQPIRVSGSGSADYVRDAKVAVLKAIE
PVRAENVVLGQYLGSDDGNQPGYKDDAGVPDDSNTPTFATCVLFVKNRRW
DGVPFIFKAGKALNETKAEA
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mRNA from alignment at E-fasciculatus_F_contig11957:3..2971+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11957.1527.1 ID=mRNA_E-fasciculatus_F_contig11957.1527.1|Name=mRNA_E-fasciculatus_F_contig11957.1527.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2969bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11957:3..2971+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCGGCATCAATCAAACAAGTGGGCTTGAGCGCTACGGGCTTCACGCGACT
TGTGGTTGAGAAACGTGAGTGCAAGACTGTCCAACATTGATGAGGGTATT
CGTAACTTTCGCACTGTAGATCAATACGACCAGTTAGTCCGCGGGGCTCT
CCCCGATGTACGGTGGTTACGCTCGCTGGAAGGAGGCCACTTCCGTATCC
GACACAAGAGAGCACCCCACACGCCCACCCCCGGTACCCACCTCTGAAAA
AGTAGGAAGGAACGATTGACCATCGGTGATCGGTCCTGTGGAAACAGTGC
TCCGTCCTCTCGAGGACGCGTGGCCTATGGTCTAACCGCTAAGGCATGCA
AAACATAAGAGTACGCCCCCCCCCACCCCCCACTCCCACTTGCAGTTTTT
TACGGGTCAGCATGAGCCCCACACCACTGCTAAAACTGTCTTTAGACGAT
AAAGCGACACTAGAAACTACGCCCAACGATTATTGTTTTACGAGTCCTAA
AGCTATTTACCAGGGTGTTACTTCTTGTGTCGTACAGTATCAGGTAAGGA
CCCCAGGGTGACGGCGTTTTAATCGGCCGTCACAAGCATAATCTGCGCTA
GGTAATCTTGGACAGACTTCGTTTGCACCCCTTGACTATCTCCCTCTTTG
CTGTCGTCTTCTTCTCTTTCCGGTCGTGCAGCCTTCGGCCACGACTACGA
TTCTGCTCTCAAGGTCAGACTTTCAAATTCATTGCAGATTGATTGCTCGT
TGTGTCTCTCGCACATGGATTGAGTGTTACGCCTGACCATTCCGAGTTAA
GCGCCGTGGCACTGCTGTGTAGCTTGGTGTTGCGTTGCGCTGTACTGCTG
GCCGGAGAAGAGCCCCTGTTCGCGAGGCCACCCAGCCCGCGCCGTTTCGT
GTTGAATTTCTGCAAGCCTCTCTCTTTTCGAATGCTCTCGTAAAAGCAAG
AGGCCCTTCGAGGCAGATAGATTTTGCTCGCTTGCACCCCTCCTTTGTTC
CACGTGAAGGCATGCCAATTCGTCGATGCGCACGCGTGTGTGTTTTTTTA
TGATTAGCATCGACCGCGCTAACCGGCTGACCAATGAGAAGGCGTCAGTC
TCAGTGCGTTGGAAAACACAAAATGCTTAAATAGTCCACAATCTGGGACC
CTGAGACCGAGTGTCATGGGAGAGTCTACACTACTCTCCGGATTAGAGAC
AGATACCGTAGCAATAACAGAAGAAAACTGCACGCGCGCGCGCGTGTGTG
TGTGTGTGTGTGCCCGAAGCGAGCGATAACTAACAACCCTGCCGCTGATG
AATCGATCCACAGCTGACCGACGACCTCGGCGCACACTTCGACGAGTCGT
ACGTGTACCGCATTGACCACTACCTCGGGAAAGAGATGACCCAGAACCTG
CTCGTCCTGCGGTTCTCCAACACCATGTTCGAGCCCATCTGGAACCGCGA
CTCGGTGCAGAGCGTGACGTTCACCTTCAAGGAGAACTTCGGGACGGAAG
GCCGAGGGGGGTACTTCGACAGGTCCGCGTGTGCTCTCCCCTCCTCTCTG
GGTTGATTGAGATGGTTTGACAAGCCTTGTTGTGCGCAGAGGGTCAAACT
GTTTGGGATTTCAACTTCTTTGCTGCAGGTGATAGATAACGTGCGTGTGT
TTGCCCCATCTATTCTGGGGCCAGTCTACAACTTGCAGGAGGAAGGTAAT
GCAGGCCTGTTTCGTATGTCTTTGTCCCATTTGCCCCCTGCGTTGCTTAC
CAGTCGACCTAACTCCTGCTCTTGTTCTCTCGTTTCCTACTTGTCGCTGC
TCCAGATATGGGATCATCCGAGACGTGATCCAAAACCACCTCATGCAGGT
GGGCACGGGCGGTTCATTGAACGATGCACCCGCCATGGAATCAGTCAGTT
TTATTTTCGATGATGGGTTGGAGAACAAGTCTTTCGTAAAACACGGAAGC
CCAGGATCGGTAGGTACGGGTGTGTGGGTAAGAGTCAACCTCGTGGATAA
CCGACGGCCTTCTCAGGGGTGTATGCGCCAATGTCCCAGGTCATCTCTTG
GTCGTAGAATCTGTGCACACTCACCCCTGAGTGTTCCGACTCATGGCTGA
AGTGTGTAGACTATGCCGCATTGCCCCCTGCGTTAAACGCTTGTGTCGCG
TTCCGCCGCCTTTGTTCCGCACCGTGGACTGCTATGTTTTGGTAAAATAC
GGTAATACGGGACAGGTCTTCACGCTCATCGCGATGGAGCAACCTATTCG
CGTCTCGGGCAGCGGTTCCGCGGACTACGTGCGTGATGCCAAGGTGACAC
GACACGACACGACACGACGTCACATGACATCGGCTGGTTGAACCGTAGAG
CGCGAGCGTGATCGGTGCACAGAGGTTTTGCCCTACGTTGCGGGGGCGCG
CGTCTCCCGCTCTCCGTCGGCCTGAGCGCAGTTGGAGACACGCGAGGAGC
AAAAACGATTAACGCAACACCCCCACCCCCACCCAAACGTTTTGACGAAC
AGGTGGCTGTGTTGAAAGCCATCGAACCTGTCCGTGCAGAGAACGTCGTC
CTTGGACAGTACCTCGGGAGCGATGACGGAAATCAGCCTGGGTACAAGGA
CGGTGAGTCTTACCTATGTTTATGGTTGTATATTTACCAGACATGCCCAA
CGGCGGTGGGTGGGGGTTACGAGTTGTCATCGCTGGCTACTTACTGCCCT
GACGACAGCACGATAGTCACTTCTGACGTAGCCCAGCTCCATCGAGCGGT
CGTGCTCCTCCCTGAATGATCCCTGTCGTCCCTTGTGACCAACTTGCTCT
GTTCGGCCTGGCTTGTTGTGCTTTGGCCTACCAGATGCCGGAGTGCCGGA
CGACTCGAACACGCCTACCTTCGCTACGTGCGTGCTGTTTGTCAAGAACC
GGCGGTGGGACGGTGTTCCCTTCATCTTCAAGGCGGGGAAAGCCCTCAAC
GAGACAAAGGCCGAGGCAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11957:3..2971+

>mRNA_E-fasciculatus_F_contig11957.1527.1 ID=mRNA_E-fasciculatus_F_contig11957.1527.1|Name=mRNA_E-fasciculatus_F_contig11957.1527.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1320bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11957:3..2971+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCGGCATCAATCAAACAAGTGGGCTTGAGCGCTACGGGCTTCACGCGACT
TGTGGTTGAGAAACGCGGCATCAATCAAACAAGTGGGCTTGAGCGCTACG
GGCTTCACGCGACTTGTGGTTGAGAAACCCTTCGGCCACGACTACGATTC
TGCTCTCAAGCCTTCGGCCACGACTACGATTCTGCTCTCAAGCTGACCGA
CGACCTCGGCGCACACTTCGACGAGTCGTACGTGTACCGCATTGACCACT
ACCTCGGGAAAGAGATGACCCAGAACCTGCTCGTCCTGCGGTTCTCCAAC
ACCATGTTCGAGCCCATCTGGAACCGCGACTCGGTGCAGAGCGTGACGTT
CACCTTCAAGGAGAACTTCGGGACGGAAGGCCGAGGGGGGTACTTCGACA
GCTGACCGACGACCTCGGCGCACACTTCGACGAGTCGTACGTGTACCGCA
TTGACCACTACCTCGGGAAAGAGATGACCCAGAACCTGCTCGTCCTGCGG
TTCTCCAACACCATGTTCGAGCCCATCTGGAACCGCGACTCGGTGCAGAG
CGTGACGTTCACCTTCAAGGAGAACTTCGGGACGGAAGGCCGAGGGGGGT
ACTTCGACAGATATGGGATCATCCGAGACGTGATCCAAAACCACCTCATG
CAGATATGGGATCATCCGAGACGTGATCCAAAACCACCTCATGCAGGTCT
TCACGCTCATCGCGATGGAGCAACCTATTCGCGTCTCGGGCAGCGGTTCC
GCGGACTACGTGCGTGATGCCAAGGTCTTCACGCTCATCGCGATGGAGCA
ACCTATTCGCGTCTCGGGCAGCGGTTCCGCGGACTACGTGCGTGATGCCA
AGGTGGCTGTGTTGAAAGCCATCGAACCTGTCCGTGCAGAGAACGTCGTC
CTTGGACAGTACCTCGGGAGCGATGACGGAAATCAGCCTGGGTACAAGGA
CGGTGGCTGTGTTGAAAGCCATCGAACCTGTCCGTGCAGAGAACGTCGTC
CTTGGACAGTACCTCGGGAGCGATGACGGAAATCAGCCTGGGTACAAGGA
CGATGCCGGAGTGCCGGACGACTCGAACACGCCTACCTTCGCTACGTGCG
TGCTGTTTGTCAAGAACCGGCGGTGGGACGGTGTTCCCTTCATCTTCAAG
GCGGGGAAAGCCCTCAACGAGACAAAGGCCGAGGCAATGCCGGAGTGCCG
GACGACTCGAACACGCCTACCTTCGCTACGTGCGTGCTGTTTGTCAAGAA
CCGGCGGTGGGACGGTGTTCCCTTCATCTTCAAGGCGGGGAAAGCCCTCA
ACGAGACAAAGGCCGAGGCA
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