prot_E-fasciculatus_F_contig11952.1524.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig11952.1524.1
Unique Name	prot_E-fasciculatus_F_contig11952.1524.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	552

Homology

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BLAST of mRNA_E-fasciculatus_F_contig11952.1524.1 vs. uniprot
Match: A0A6H5L6Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z7_9PHAE)

HSP 1 Score: 563 bits (1451), Expect = 7.210e-186
Identity = 380/459 (82.79%), Postives = 388/459 (84.53%), Query Frame = 0

Query:   98 HLPATAAARPLATNAAWVVKPASYSLPSPNATTAXXXXXXXXXXXXPSSSKEPHLPEDQQLSLAPGQQP-SVQPQAGGRRRQGRGGYXXXXXXXX---TQQFETYRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTIATLTIASLLTYALYHASVEALAGQRTRLSIPRRHPSSASAGGRSLIGTSGRDVSAEIVATGGAAGAAAADKTALLQDEDDHLSDGGIGFKVEYYERVPPPAVAWRGXXXXXXXXXXXXXXATVAGWGKGVSVVTVSAWQSLAALGVGFLMSRFWRRFRRSEVRALSDAERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGTAAAEVLRSTEAAFFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANVLLAVRAIAAKMALDDYGLDEISALFSGAKMTAGLQCLILLVVEVPRAAGGLSPRL 552
            HLPATA  RP ATNAAWVVKPASYSLP P+ TTA  XXXXX     PSS  E H  EDQQLSLAPGQQP S QPQAGGRRRQGRGGY           TQQFET RQ XXXXXXXXXXXXXXXXXXXXXXXXX  GTIATL +ASL+TYALY+ASVEALAGQRTRLSIPRRHPSSASAGG SLIGTSGRDV AEIV TG              +DEDDHLSDGGIGFKVEYYERVP  AV+W G    XXXXXXXX    VAGWGKGVSVVTVSAWQ+LAALG GFLMSRFWRRFRR EVRALSD ERTRRNKFLLVFAAAHLAGTGLEYHGYGVIG AAAEVLRSTEAA FCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAAN+LLAVRAIAAKMALDDYGLDEISALFSGA MTAGLQ LILLVVEVPRAA GLSPRL
Sbjct:   88 HLPATAT-RPFATNAAWVVKPASYSLP-PSNTTAAAXXXXXPARAPPSSLTELHPAEDQQLSLAPGQQPPSQQPQAGGRRRQGRGGYRGSIPSPPPLATQQFETCRQQXXXXXXXXXXXXXXXXXXXXXXXXXA-GTIATLILASLITYALYNASVEALAGQRTRLSIPRRHPSSASAGGASLIGTSGRDVPAEIVTTGXXXXXXXXXXXXXXEDEDDHLSDGGIGFKVEYYERVPT-AVSWGGGANGXXXXXXXX---AVAGWGKGVSVVTVSAWQTLAALGFGFLMSRFWRRFRRPEVRALSDGERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAACFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANILLAVRAIAAKMALDDYGLDEISALFSGATMTAGLQSLILLVVEVPRAAAGLSPRL 539

[Close]

BLAST of mRNA_E-fasciculatus_F_contig11952.1524.1 vs. uniprot
Match: D7G6G9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G9_ECTSI)

HSP 1 Score: 551 bits (1419), Expect = 4.910e-184
Identity = 369/466 (79.18%), Postives = 377/466 (80.90%), Query Frame = 0

Query:   90 AGVSGGGQHLPATAAARPLATNAAWVVKPASYSLPSPNATTAXXXXXXXXXXXXPSSSKEPHLPEDQQLSLAPGQQPS---VQPQAGGRRRQGRGGYXXXXXXXXTQQFETYRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTIATLTIASLLTYALYHASVEALAGQRTRLSIPRRHPSSASAGGRSLIGTSGRDVSAEIVATGGAAGAAAADKTALLQDEDDHLSDGGIGFKVEYYERVPPPAVAWRGXXXXXXXXXXXXXXATVAGWGKGVSVVTVSAWQSLAALGVGFLMSRFWRRFRRSEVRALSDAERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGTAAAEVLRSTEAAFFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANVLLAVRAIAAKMALDDYGLDEISALFSGAKMTAGLQCLILLVVEVPRAAGGLSPRL 552
            AGVSGGG HLPATAA RPLATNAAWVVKPASYSLP PNAT A            P SS E HL E +QLSLAPGQQP                    XXXXXXXX         XXXXXXXXXXXXXXXXXXXX        GTIATL +ASLLTYALY+ASVEALAGQRTRLS+PRRHPSSASA G SLIGTSGRDV AEI  TGGA        TALL+DEDDHLSDGGIG KVEYYERVPP AV+W G      XXXX    A VAGWGKGVSVVTVSAWQ+LAALGVGFLMSRFWRRFRR EVRALSDAERTRRNKFLLVFAAAHLAGTGLEYHGYGVIG AAAEVLRSTEAAFFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAAN+LLAVRAIAAKMALDDYGLDEISALFSGAKMTAGLQCLILLVVEVPRAA GLSPRL
Sbjct:  110 AGVSGGGHHLPATAA-RPLATNAAWVVKPASYSLPPPNAT-ALAVTAAAPAHAPPPSSTELHLAEGRQLSLAPGQQPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGRGSASAGTIATLILASLLTYALYNASVEALAGQRTRLSVPRRHPSSASARGGSLIGTSGRDVPAEIGTTGGAXXXXXXXXTALLEDEDDHLSDGGIGSKVEYYERVPP-AVSWGGGANGGEXXXXG---AAVAGWGKGVSVVTVSAWQTLAALGVGFLMSRFWRRFRRPEVRALSDAERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAAFFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKMALDDYGLDEISALFSGAKMTAGLQCLILLVVEVPRAAAGLSPRL 569

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig11952.1524.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig11952.1524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L6Z7_9PHAE	7.210e-186	82.79	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G6G9_ECTSI	4.910e-184	79.18	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..367
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 540..552
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 507..517
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 427..457
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 387..406
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 518..539
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 368..386
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 458..476
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 488..506
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 407..426
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 477..487

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig11952	contig	E-fasciculatus_F_contig11952:3..3863 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig11952.1524.1	mRNA_E-fasciculatus_F_contig11952.1524.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig11952 3..3863 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig11952.1524.1 ID=prot_E-fasciculatus_F_contig11952.1524.1|Name=mRNA_E-fasciculatus_F_contig11952.1524.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=552bp
MQHEADMMLSSSTNRWRKRPPNQAGGGASGSSSRRSPNTAAADRRHLDPP
PAVAVGAHSSRTGAEQQQQQQQQQQQQQQQHQFYYPAIAAGVSGGGQHLP
ATAAARPLATNAAWVVKPASYSLPSPNATTAAATAAAPAHAPPPSSSKEP
HLPEDQQLSLAPGQQPSVQPQAGGRRRQGRGGYGAPPPPPATQQFETYRQ
QQQQQPQQQHQHQHPSGGGGDGRGSASAGTIATLTIASLLTYALYHASVE
ALAGQRTRLSIPRRHPSSASAGGRSLIGTSGRDVSAEIVATGGAAGAAAA
DKTALLQDEDDHLSDGGIGFKVEYYERVPPPAVAWRGGAKGGEEGGGGGG
GATVAGWGKGVSVVTVSAWQSLAALGVGFLMSRFWRRFRRSEVRALSDAE
RTRRNKFLLVFAAAHLAGTGLEYHGYGVIGTAAAEVLRSTEAAFFCLLSL
NVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANVLLA
VRAIAAKMALDDYGLDEISALFSGAKMTAGLQCLILLVVEVPRAAGGLSP
RL