mRNA_E-fasciculatus_F_contig1194.1516.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1194.1516.1 vs. uniprot
Match: D7FJS7_ECTSI (MAP kinase phosphatase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS7_ECTSI) HSP 1 Score: 259 bits (663), Expect = 8.270e-85 Identity = 123/125 (98.40%), Postives = 125/125 (100.00%), Query Frame = 1
Query: 1 MPLTIEPGGDCVPTELEKKRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRS 375
MPLTIEPGGDCVPTELEKKRAKLEKY+YECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMY+AFDFMKAAEEQRGRVLVHCVQGVSRS
Sbjct: 1 MPLTIEPGGDCVPTELEKKRAKLEKYRYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYKAFDFMKAAEEQRGRVLVHCVQGVSRS 125
BLAST of mRNA_E-fasciculatus_F_contig1194.1516.1 vs. uniprot
Match: A0A6H5L2L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L8_9PHAE) HSP 1 Score: 262 bits (670), Expect = 5.780e-80 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1
Query: 1 MPLTIEPGGDCVPTELEKKRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRS 375
MPLTIEPGGDCVPTELEKKRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRS
Sbjct: 121 MPLTIEPGGDCVPTELEKKRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRS 245
BLAST of mRNA_E-fasciculatus_F_contig1194.1516.1 vs. uniprot
Match: A0A7S4DF41_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DF41_HETAK) HSP 1 Score: 107 bits (266), Expect = 7.860e-27 Identity = 53/108 (49.07%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 52 KKRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRS 375
+K AKL + CSEV +LYV+G+ A + + GITHI+N + CPN+ E GRF +L +D R E+ WFMYQAFDF++ A RGR LVHCV+GVSRS
Sbjct: 23 RKSAKLRHFSVLCSEVLE-WLYVAGKAVAGNEEQLIDNGITHILNSSVTHCPNFFEAGGRFAYLGFRLHDSRDEEVVWFMYQAFDFIEGARRARGRCLVHCVEGVSRS 129
BLAST of mRNA_E-fasciculatus_F_contig1194.1516.1 vs. uniprot
Match: A0A835YKW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW6_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.690e-22 Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 1
Query: 13 IEPGGDCVPTELEKKRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGR-------------FNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQ 330
++ G + P E ++R++LE++++ CSE+ FLYVSGE+ A +A GITH+INCAGP CPNY E +LRL+FYD +ED AWF+Y A DF+ +A +Q
Sbjct: 37 MDAGTEANPAE--ERRSRLEEFRFVCSEIVPGFLYVSGEEVACDGTALARVGITHVINCAGPHCPNYHETAAXXXXXXXXXXSAQSIKYLRLDFYDSASEDLAWFLYPALDFIDSAAQQ 153
BLAST of mRNA_E-fasciculatus_F_contig1194.1516.1 vs. uniprot
Match: A0A7S2V0L7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0L7_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.840e-19 Identity = 48/117 (41.03%), Postives = 64/117 (54.70%), Query Frame = 1
Query: 61 AKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGR------------FNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRS 375
AKL + CS V L+VSG+ A + L+ ITH++NCA CPNY E +L N +D + ED F+YQ+FDF+++ E GRVLVHCV+GVSRS
Sbjct: 60 AKLAHFAEICSSVLPDLLFVSGKKVAANRKLLQENKITHVLNCARCHCPNYFEEKSSSANTTTQGEADGLRYLSFNLFDSKMEDITCFLYQSFDFIESCREAGGRVLVHCVEGVSRS 176
BLAST of mRNA_E-fasciculatus_F_contig1194.1516.1 vs. uniprot
Match: A0A4D9AMJ3_SALSN (Atypical dual specificity phosphatase n=6 Tax=Salvia TaxID=21880 RepID=A0A4D9AMJ3_SALSN) HSP 1 Score: 89.7 bits (221), Expect = 2.240e-18 Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 1
Query: 22 GGDCVPTELEKKRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRS 375
D PTE E ++ KL + ECS + ++Y+ + AK + ++ GITH++NC G CP Y + + L L D +ED +Y FD+ + +EQRGRVLVHC QGVSRS
Sbjct: 114 NSDQPPTEFEFRKDKLAFFNKECSRILD-YIYLGSDAIAKNREILRQNGITHVLNCVGFVCPEYFKNELVYKTLWLQ--DCPSEDITSILYDVFDYFEDVQEQRGRVLVHCFQGVSRS 228
BLAST of mRNA_E-fasciculatus_F_contig1194.1516.1 vs. uniprot
Match: A0A1J7HYG0_LUPAN (Uncharacterized protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A1J7HYG0_LUPAN) HSP 1 Score: 89.4 bits (220), Expect = 2.970e-18 Identity = 53/130 (40.77%), Postives = 68/130 (52.31%), Query Frame = 1
Query: 4 PLTIEPGGDCVPTEL------EKKRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRS 375
PL P G TEL + KR KL Y ECS ++ +Y+ + AK L+ GITH++NC G CP Y + F + L D TED +Y FD+ + EQRGRVLVHC +GVSRS
Sbjct: 71 PLPQTPKGSIRSTELGSMNEFQFKRDKLAFYDKECSRIADH-VYLGSDTVAKNHELLRQNGITHVLNCVGFVCPEY--FKSDFVYKTLWLKDSPTEDITSILYDVFDYFEDVREQRGRVLVHCCRGVSRS 197
BLAST of mRNA_E-fasciculatus_F_contig1194.1516.1 vs. uniprot
Match: A0A498KLG7_MALDO (Uncharacterized protein n=7 Tax=Maleae TaxID=721813 RepID=A0A498KLG7_MALDO) HSP 1 Score: 86.7 bits (213), Expect = 2.680e-17 Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 1
Query: 55 KRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRS 375
+R K+ + ECS+V+ +Y+ G+ A+ + ++ GITH++NC G CP Y + F + L D TED +Y FD+ + EQRGRVLVHC QGVSRS
Sbjct: 139 RRDKIAFFDKECSKVAEH-IYLGGDAVARDRDILKQSGITHVLNCVGFVCPEY--FKADFVYRTLWLQDSPTEDITSILYDVFDYFEDVREQRGRVLVHCCQGVSRS 242
BLAST of mRNA_E-fasciculatus_F_contig1194.1516.1 vs. uniprot
Match: A0A6J0NI26_RAPSA (protein-tyrosine-phosphatase MKP1 n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0NI26_RAPSA) HSP 1 Score: 85.9 bits (211), Expect = 4.900e-17 Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 1
Query: 55 KRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRS 375
KR K+ + ECS+V+ +YV G+ AK + ++ + GITH++NC G CP Y + F + L D +ED +Y FD+ + EQRGR+ VHC QGVSRS
Sbjct: 139 KREKIACFDKECSKVAEH-IYVGGDAVAKDKEILKNNGITHVLNCVGFICPEY--HKSDFCYRSLWLRDSPSEDITSILYDVFDYFEDVREQRGRIFVHCCQGVSRS 242
BLAST of mRNA_E-fasciculatus_F_contig1194.1516.1 vs. uniprot
Match: A0A7N2MFJ2_QUELO (Uncharacterized protein n=4 Tax=Fagaceae TaxID=3503 RepID=A0A7N2MFJ2_QUELO) HSP 1 Score: 85.9 bits (211), Expect = 4.940e-17 Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 55 KRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGLVASKGITHIINCAGPQCPNYLEYTGRFNFLRLNFYDHRTEDCAWFMYQAFDFMKAAEEQRGRVLVHCVQGVSRS 375
KR K+ + ECS+V+ +Y+ G+ AK + ++ GITH++NC G CP Y + F + L D +ED +Y FD+ + EQRGRV VHC QGVSRS
Sbjct: 143 KRDKIAFFDKECSKVAEH-IYLGGDAVAKDRNILKQHGITHVLNCVGFVCPEY--FKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQRGRVFVHCCQGVSRS 246 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1194.1516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1194.1516.1 >prot_E-fasciculatus_F_contig1194.1516.1 ID=prot_E-fasciculatus_F_contig1194.1516.1|Name=mRNA_E-fasciculatus_F_contig1194.1516.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=125bp MPLTIEPGGDCVPTELEKKRAKLEKYKYECSEVSSSFLYVSGEDAAKQQGback to top mRNA from alignment at E-fasciculatus_F_contig1194:13900..19398+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1194.1516.1 ID=mRNA_E-fasciculatus_F_contig1194.1516.1|Name=mRNA_E-fasciculatus_F_contig1194.1516.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5499bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1194:13900..19398+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1194:13900..19398+ >mRNA_E-fasciculatus_F_contig1194.1516.1 ID=mRNA_E-fasciculatus_F_contig1194.1516.1|Name=mRNA_E-fasciculatus_F_contig1194.1516.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=750bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1194:13900..19398+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |