mRNA_E-fasciculatus_F_contig11938.1512.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11938.1512.1 vs. uniprot
Match: UPI001ED8B841 (uncharacterized protein LOC124164452 n=3 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8B841) HSP 1 Score: 139 bits (349), Expect = 3.310e-34 Identity = 78/175 (44.57%), Postives = 106/175 (60.57%), Query Frame = 2
Query: 149 VPAHFHASPANRKKRQLDGMAVVARKGRPSLMATVTCNGYWPEIQQNLLPGQCAMDRPDLCNRVFKIKLREIMRDLQSN-LFGKAEFHLSVIEFQNRGMPHCHIVIKYRGLSPEARHEVDNKWIWTNLPDDRIAG-------DYMVHHKCGNFNPNAPCMTTDKKTNRKYCSKHY 649
+P+ F SP + R LD MA+V+RKG+PS TVTCN W EI+ +L PG+ A+DRPDLC RVF+ KLR+++ +++ +FG+ + L VIEFQ RG+PH HI + G P E+D+ T P + G MVH CG NPNAPCM D++T + CSK Y
Sbjct: 216 LPSTFTNSPRYMQIRYLDAMALVSRKGKPSFFLTVTCNPSWVEIKNSLNPGENAVDRPDLCVRVFQEKLRKLLNGIRNGVIFGELIYILYVIEFQKRGLPHAHIAFRVAGGGPTQSDEIDSFVRATIPPREEANGRLHTLVLQNMVHGPCGINNPNAPCM--DRETGK--CSKRY 386
BLAST of mRNA_E-fasciculatus_F_contig11938.1512.1 vs. uniprot
Match: A0A8H7RVE7_9FUNG (Helitron_like_N domain-containing protein n=2 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7RVE7_9FUNG) HSP 1 Score: 133 bits (335), Expect = 2.450e-32 Identity = 69/165 (41.82%), Postives = 98/165 (59.39%), Query Frame = 2
Query: 137 RSYSVPAHFHASPANRKKRQLDGMAVVARKGRPSLMATVTCNGYWPEIQQNLLPGQCAMDRPDLCNRVFKIKLREIMRDL-QSNLFGKAEFHLSVIEFQNRGMPHCHIV-IKYRGLSPEARHEVDNKWIWTNLPDD-------RIAGDYMVHHKCGNFNPNAPCM 604
RS +P+ F P K+ DG+A++ ++G P+L T TCN WPEIQ LLPGQ A DRPD+C+RVF IK+ E+M + +SN FG+ +++ +EFQ RG+PH HI+ I + P + D+ ++ LP+ R M+H CGN NPNA CM
Sbjct: 549 RSIILPSSFTGGPRCMKQMLQDGLAIIRQRGNPTLFITFTCNPQWPEIQSELLPGQQAFDRPDICSRVFHIKITEMMAHIKESNCFGRVVGYVATVEFQKRGLPHVHILLILHHQDRPRNPADYDH-FVCAELPNSATHPQLYRTVTSSMIHGPCGNLNPNAICM 712
BLAST of mRNA_E-fasciculatus_F_contig11938.1512.1 vs. uniprot
Match: UPI001ED88D7B (uncharacterized protein LOC124161349 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED88D7B) HSP 1 Score: 133 bits (334), Expect = 3.370e-32 Identity = 75/175 (42.86%), Postives = 105/175 (60.00%), Query Frame = 2
Query: 149 VPAHFHASPANRKKRQLDGMAVVARKGRPSLMATVTCNGYWPEIQQNLLPGQCAMDRPDLCNRVFKIKLREIMRDLQSN-LFGKAEFHLSVIEFQNRGMPHCHIVIKYRGLSPEARHEVDNKWIWTNLPDDRIAG-------DYMVHHKCGNFNPNAPCMTTDKKTNRKYCSKHY 649
+P+ F SP + R LD MA+V+RKG+PS TVTCN W EI+ +L PG+ A+DRPDLC RVF+ KLR+++ +++ +FG+ + L VIEFQ RG+PH HI + G P ++D+ T P + G +MVH CG N APCM D++T + CSK Y
Sbjct: 216 LPSTFTNSPRYMQIRYLDAMALVSRKGKPSFFLTVTCNPSWVEIRSSLNPGEDAVDRPDLCVRVFQEKLRKLLNGIRNGVIFGELIYILYVIEFQKRGLPHAHIAFRVAGGGPTQSDDIDSFVRATIPPREEANGRLHTLVLQHMVHGPCGINNAYAPCM--DRETGK--CSKRY 386
BLAST of mRNA_E-fasciculatus_F_contig11938.1512.1 vs. uniprot
Match: A0A0K9P1L3_ZOSMR (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P1L3_ZOSMR) HSP 1 Score: 132 bits (332), Expect = 5.840e-32 Identity = 73/178 (41.01%), Postives = 101/178 (56.74%), Query Frame = 2
Query: 149 VPAHFHASPANRKKRQLDGMAVVARKGRPSLMATVTCNGYWPEIQQNLLPGQCAMDRPDLCNRVFKIKLREIMRDLQSN-LFGKAEFHLSVIEFQNRGMPHCHIVIKYRGLSPEAR---HEVDNKWIWTNLPDDR-------IAGDYMVHHKCGNFNPNAPCMTTDKKTNRKYCSKHY 649
+P+ F SP N ++ D M +V R G+PSL T TCN WPEIQ+NL PG A D PDL NRVF +KL+E+++D++ +FGK + V+EFQ RG+PH HI+I L+PE E ++ + +PD + M+H CG N N CM DK +K CSK +
Sbjct: 406 LPSSFKGSPRNCQQGYQDSMGLVRRFGKPSLFVTFTCNPAWPEIQRNLQPGNTAFDEPDLVNRVFNLKLKELLKDIKERRIFGKTVAYTYVVEFQKRGLPHAHILII---LAPEDEIKDPETIDEVVCAEIPDKEQFPRLFEVVTRNMIHGPCGEHNMNCVCMEEDKSGVKK-CSKDF 579
BLAST of mRNA_E-fasciculatus_F_contig11938.1512.1 vs. uniprot
Match: A0A8K0NXB8_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0NXB8_LADFU) HSP 1 Score: 122 bits (307), Expect = 1.420e-31 Identity = 66/134 (49.25%), Postives = 87/134 (64.93%), Query Frame = 2
Query: 149 VPAHFHASPANRKKRQLDGMAVVARKGRPSLMATVTCNGYWPEIQQNLLPGQCAMDRPDLCNRVFKIKLREIMR-DLQSNLFGKAEFHLSVIEFQNRGMPHCHIVIKYRGLSPEARHEVDNKWIWTNLPDDRIA 547
+P+ F SP K + DGMA+V+RKGRPS T+TCN W EIQ++ GQ A+DRPDLCNRVF+IKL IMR L LFGK + + VIEFQ RG+PH HI +K +G P+ ++D+ +I +P A
Sbjct: 51 LPSSFTHSPRYVKIKMQDGMALVSRKGRPSFFITITCNPQWVEIQESPDNGQTALDRPDLCNRVFQIKLAAIMRLILSGKLFGKVIYVMYVIEFQKRGLPHAHIALKVQG-EPKTTADIDS-FIRATIPSTEEA 182
BLAST of mRNA_E-fasciculatus_F_contig11938.1512.1 vs. uniprot
Match: UPI0010BCEECB (uncharacterized protein LOC100900389 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0010BCEECB) HSP 1 Score: 131 bits (329), Expect = 1.670e-31 Identity = 68/160 (42.50%), Postives = 91/160 (56.88%), Query Frame = 2
Query: 149 VPAHFHASPANRKKRQLDGMAVVARKGRPSLMATVTCNGYWPEIQQNLLPGQCAMDRPDLCNRVFKIKLREIMRD-LQSNLFGKAEFHLSVIEFQNRGMPHCHIVIKYRGL-SPEARHEVDNKWIWTNLPDDRI-------AGDYMVHHKCGNFNPNAPC 601
+P+ F S ++ D MA+VAR G+P L T+TCN WPE+ NL PGQ A RPDL RVFK+KL I D L+ +FGK H+ VIEFQ RG+PHCH ++ G P +VD + +PD + ++M+H C FNP+APC
Sbjct: 456 LPSSFIGSARYMQQNYQDAMAIVARFGKPDLFITITCNPKWPELHDNLFPGQSAEHRPDLIARVFKLKLDAIFDDILKKKVFGKVLAHVMVIEFQKRGLPHCHTLLILEGTYKPRTPDDVD-RICCAEIPDPELEPQLHEAVKNFMIHRNCARFNPSAPC 614
BLAST of mRNA_E-fasciculatus_F_contig11938.1512.1 vs. uniprot
Match: A0A368F9Z6_ANCCA (ATP-dependent DNA helicase n=1 Tax=Ancylostoma caninum TaxID=29170 RepID=A0A368F9Z6_ANCCA) HSP 1 Score: 130 bits (328), Expect = 2.310e-31 Identity = 71/179 (39.66%), Postives = 99/179 (55.31%), Query Frame = 2
Query: 137 RSYSVPAHFHASPANRKKRQLDGMAVVARKGRPSLMATVTCNGYWPEIQQNLLPGQCAMDRPDLCNRVFKIKLREIMRDLQSNLF-GKAEFHLSVIEFQNRGMPHCHIVIKYRGLSPEARHEVDNKWIWTNLPDDR-------IAGDYMVHHKCGNFNPNAPCMTTDKKTNRKYCSKHY 649
R+ +P+ F SP + ++ D MA+V R G+P L T TCN W EI +NL P +D PDL +RVF +KL+E++ DL+ + G+ + VIEFQ RG+PH HI++ S E + +W +PD I +M+H CG N NAPCM DK N KYCSK +
Sbjct: 673 RTIILPSSFKGSPRHCQQGYQDSMALVRRFGKPDLFITFTCNPNWDEITRNLQPSNKVLDEPDLVDRVFHLKLKELIDDLKKKEYLGRILAYTYVIEFQKRGLPHAHILLILDNESKIRTAEDIDNLVWAEIPDKNRFPRLHSIVTSHMIHGPCGIHNMNAPCMVDDKNGN-KYCSKKF 850
BLAST of mRNA_E-fasciculatus_F_contig11938.1512.1 vs. uniprot
Match: UPI000870B864 (uncharacterized protein LOC100901161 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI000870B864) HSP 1 Score: 130 bits (326), Expect = 3.160e-31 Identity = 70/169 (41.42%), Postives = 97/169 (57.40%), Query Frame = 2
Query: 149 VPAHFHASPANRKKRQLDGMAVVARKGRPSLMATVTCNGYWPEIQQNLLPGQCAMDRPDLCNRVFKIKLREIMRDL-QSNLFGKAEFHLSVIEFQNRGMPHCH-IVIKYRGLSPEARHEVDNKWIWTNLPDDRIAG-------DYMVHHKCGNFNPNAPCMTTDKKTNR 628
+P F SP N ++ D MA+VA+ G+P + T TCN W EI++NL GQ A DRPDL +RVF++KL E+ +DL + ++FG+ SVIEFQ RG+PHCH ++I P EVD + +PD + +MVH +CG F APCM K T +
Sbjct: 324 LPTSFIGSPRNMQQSYQDAMAIVAKHGKPDIFMTTTCNPNWAEIKENLYSGQSACDRPDLVSRVFQLKLAELYKDLFKEHIFGRVVAFASVIEFQKRGLPHCHMLLILASEFKPRTAGEVDT-FCCAEVPDPQSEAPLHQAVKSFMVHRRCG-FGSQAPCMKDGKCTKK 490
BLAST of mRNA_E-fasciculatus_F_contig11938.1512.1 vs. uniprot
Match: A0A226D4F7_FOLCA (ATP-dependent DNA helicase n=2 Tax=Folsomia candida TaxID=158441 RepID=A0A226D4F7_FOLCA) HSP 1 Score: 129 bits (325), Expect = 5.730e-31 Identity = 71/181 (39.23%), Postives = 105/181 (58.01%), Query Frame = 2
Query: 104 SKPPLALPQQERSYSVPAHFHASPANRKKRQLDGMAVVARKGRPSLMATVTCNGYWPEIQQNLLPGQCAMDRPDLCNRVFKIKLREIMRDLQS-NLFGKAEFHLSVIEFQNRGMPHCHIVIKYRGLSPEARHEVDNKWIWTNLPDD-------RIAGDYMVHHKCGNFNPNAPCMTTDKKT 622
S+ LA Q ++ +P+ F SP N ++ D MA+V + G+P L T+TCN W EI +NL PGQC+ +RPDL RVF IKL+E++ DLQ ++FGK + VIEFQ RG+PH HI++ S + E+ +K + +P+ + +M+H CG+ N +PCM K T
Sbjct: 463 SEADLAGVQPGKAIILPSSFPGSPRNMQQNYQDAMAMVRKYGKPDLFITMTCNPKWIEIVENLEPGQCSENRPDLVARVFNIKLKELLDDLQEKHIFGKVVGVVHVIEFQKRGLPHAHILLILEPSSKPSNTEIIDKIVCAEVPNAFDNPRLYQYVKSHMIHGPCGSKNMLSPCMDKSKCT 643
BLAST of mRNA_E-fasciculatus_F_contig11938.1512.1 vs. uniprot
Match: A0A816RAG9_9BILA (Hypothetical protein n=3 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816RAG9_9BILA) HSP 1 Score: 124 bits (312), Expect = 1.090e-30 Identity = 65/167 (38.92%), Postives = 93/167 (55.69%), Query Frame = 2
Query: 149 VPAHFHASPANRKKRQLDGMAVVARKGRPSLMATVTCNGYWPEIQQNLLPGQCAMDRPDLCNRVFKIKLREIMRDLQSN-LFGKAEFHLSVIEFQNRGMPHCH-IVIKYRGLSPEARHEVDNKWIWTNLPD-------DRIAGDYMVHHKCGNFNPNAPCMTTDKKT 622
+P+ F SP ++ D M +V + G+P L T TCN W +I++ L PGQ DRPDL RVFK+KL++++ D+ N FG+ HL VIEFQ RG+PHCH ++I P + VD +++ + +PD M+H CG N N+PCM K T
Sbjct: 60 LPSSFQGSPRAMQQNYQDAMGIVRKCGKPDLFITFTCNPRWKQIEEQLFPGQTPSDRPDLIARVFKLKLKQLIDDIVRNHKFGRTVTHLFVIEFQKRGLPHCHMLIILVNESKPRDSNSVD-RFVSSEIPDADQNPQLHETVKSLMIHGSCGVPNKNSPCMEDGKCT 225 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11938.1512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11938.1512.1 >prot_E-fasciculatus_F_contig11938.1512.1 ID=prot_E-fasciculatus_F_contig11938.1512.1|Name=mRNA_E-fasciculatus_F_contig11938.1512.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=214bp MRAMHTHDKKTTFWTTTSPRNDANEESQITEPSKPPLALPQQERSYSVPAback to top mRNA from alignment at E-fasciculatus_F_contig11938:777..1454- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11938.1512.1 ID=mRNA_E-fasciculatus_F_contig11938.1512.1|Name=mRNA_E-fasciculatus_F_contig11938.1512.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=678bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11938:777..1454- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11938:777..1454- >mRNA_E-fasciculatus_F_contig11938.1512.1 ID=mRNA_E-fasciculatus_F_contig11938.1512.1|Name=mRNA_E-fasciculatus_F_contig11938.1512.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1284bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11938:777..1454- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |