prot_E-fasciculatus_F_contig1191.1498.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1191.1498.1
Unique Nameprot_E-fasciculatus_F_contig1191.1498.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length187
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1191.1498.1 vs. uniprot
Match: D7FKG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG2_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 3.090e-60
Identity = 104/111 (93.69%), Postives = 107/111 (96.40%), Query Frame = 0 
Query:   76 MPNEYEAFFNKASRLGADATRGLAPEERAQRAMEGEKLEDEIIEIATVLREKADEMVAETGAINFEIIQPMIDEIAVLKSKYKVVMGATESMDGDGAPDADDGEEDASSSC 186
            MPNEYEAFFNKASRLGADATR LAPEERAQRAMEGEKLEDEIIEIATVLREKADEMVAETGAINFEIIQPMIDEIAVLKSKYKVVMGATE+ DGDGAPDADDGE+  +SSC
Sbjct:    1 MPNEYEAFFNKASRLGADATRDLAPEERAQRAMEGEKLEDEIIEIATVLREKADEMVAETGAINFEIIQPMIDEIAVLKSKYKVVMGATETADGDGAPDADDGED--ASSC 109
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BLAST of mRNA_E-fasciculatus_F_contig1191.1498.1 vs. uniprot
Match: A0A835YIM3_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM3_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.850e-10
Identity = 32/65 (49.23%), Postives = 50/65 (76.92%), Query Frame = 0 
Query:   98 LAPEERAQRAMEGEKLEDEIIEIATVLREKADEMVAETGAINFEIIQPMIDEIAVLKSKYKVVMG 162
            ++ EER + A+ GE+LEDEI+  AT LR+ AD MV +TGA++ + ++P+IDEI  LK++Y+ V+G
Sbjct:    1 MSIEERTRLAIIGEELEDEIMSKATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLG 65
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1191.1498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKG2_ECTSI3.090e-6093.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YIM3_9STRA2.850e-1049.23Uncharacterized protein n=3 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..18
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.725
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1191contigE-fasciculatus_F_contig1191:5905..7435 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1191.1498.1mRNA_E-fasciculatus_F_contig1191.1498.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1191 4526..7503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1191.1498.1 ID=prot_E-fasciculatus_F_contig1191.1498.1|Name=mRNA_E-fasciculatus_F_contig1191.1498.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=187bp
MHPGIVLHLAALPGIAHAFVGGWASFVVGTEQHRQQDRCADGESFARAGS
RFADSTRRPPVAAPAAARRGQQLRLMPNEYEAFFNKASRLGADATRGLAP
EERAQRAMEGEKLEDEIIEIATVLREKADEMVAETGAINFEIIQPMIDEI
AVLKSKYKVVMGATESMDGDGAPDADDGEEDASSSC*
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