mRNA_E-fasciculatus_F_contig11908.1497.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11908.1497.1 vs. uniprot
Match: A0A6H5KP02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP02_9PHAE) HSP 1 Score: 520 bits (1339), Expect = 4.920e-166 Identity = 392/670 (58.51%), Postives = 406/670 (60.60%), Query Frame = 3
Query: 3 KLLASTHGDHTVKITDFLRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGRMLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------AISP--------------------------------------------------SRPAEVSFLLQVWDFSLEAALVEDVSAAMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAELRERVVASDRRSLSAGPSLASEPSVPSLASXXXXXXXXASPMATLTEVEEEAGREGEAVGKGSAXXXXXXXXXXXXGKRKEQATTEPPGGALGSKKGSGNSDGDTVVAPKNGSHLGKLGLAMPAFVTTAGGVARAEKLTGSTSAVAGPAAAXXXXXXXGGEQHAAGTAXXXXXXXXXXXXXXXGKRGPVLAPWPSRAGTRSYFSATLAAAXXXXG----GAQDVIMGEVRSNADACGVESTVAAEEAAASATLRPETGGNNDPPPFTXXXXXXXPRITLKRRLSGSWLSASSGGGRRSAGG 1613
KL ASTHGDHTVKITDF RGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSG+MLAIASSLYVYLWDY+SKARPFIAWAHSHTLRCVRFTPG XXXXXXXXXXXX A SP SRPAEVSFLLQVWDFSLEAAL EDVS AMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAEL ERVVASDRRSL AGPSLASE S+PS+AS XXXX P+ TLTEVEEEAGREGEA KGS XXXX G+RK +ATTEPPGGA GSKKGSG+SDG V+APKNGS+LGK G A+PA VTT VA E GS SAVA P+AA GGEQH A T XXXXXXXXXXX G+ G VLAPWPSRA T YFSATLAA XXXX GAQDV MG VR+NAD CGV STVA E FTXXXXXXX ITLKRRLSGSWLSAS GGGRRSAGG
Sbjct: 57 KLFASTHGDHTVKITDFFRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGKMLAIASSLYVYLWDYSSKARPFIAWAHSHTLRCVRFTPGGDGIIVGAANXXXXXXXXXXXXRQEGPRCAAVQPRTTKTSRYARCDGGFISSGTSPKPLPLSRDFGRLCSWLTIPHVRKSRAQQWRPRPHFFFLFLWRPTSRGRYGIDVWRALSLSCGPRNRSPRGLPHSAHSPDQPDRRLDQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIPPSSRPAEVSFLLQVWDFSLEAALAEDVSTAMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAELGERVVASDRRSLPAGPSLASEQSIPSMASPTAAXXXX-XPILTLTEVEEEAGREGEAEEKGSXXXXXG-------GERKGRATTEPPGGAPGSKKGSGSSDG--VIAPKNGSNLGKPGHAVPALVTTTSRVAPTENSNGSMSAVAAPSAAGAGSDSGGGEQHTADTXXXXXXXXXXXXQHAGGEWGSVLAPWPSRARTMPYFSATLAAXXXXXXXXXVGAQDVRMGGVRNNADDCGVGSTVA--EXXXXXXXXXXXXXXXXXXXFTXXXXXXXXPITLKRRLSGSWLSAS-GGGRRSAGG 713
BLAST of mRNA_E-fasciculatus_F_contig11908.1497.1 vs. uniprot
Match: D8LR45_ECTSI (Transducin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR45_ECTSI) HSP 1 Score: 477 bits (1227), Expect = 9.650e-155 Identity = 284/389 (73.01%), Postives = 295/389 (75.84%), Query Frame = 3
Query: 3 KLLASTHGDHTVKITDFLRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGRMLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISPSRPAEVSFLLQVWDFSLEAALVEDVSAAMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAELRERVVASDRRSLSAGPSLASEPSVPSLASXXXXXXXXASPMATLTEVEEE-AGREGEAVGKGSAXXXXXXXXXXXXGKRKEQATTEPPGGALGSKKGSGNSDGDTVVAPKNGSHLGKLGLAMPAFVTTAGGVARAEKLTGSTSAVAGP 1166
KL ASTHGDHTVKITDF RGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSG+MLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPG XXXXXXXXX + ++V+ VWDFSLEAA EDVSAAMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAEL ERVVASDRRSL AGPSLASE S+PSLAS ASPM+TLTEVEEE AGREGEAV KGSA GKRK +ATTEPPGGALGSKKGSGN GDTV APKNGS+LG+ A+PA VTT G VAR E LTGSTSAVA P
Sbjct: 88 KLFASTHGDHTVKITDFFRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGKMLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGGDGIIVGAANSXXXXXXXXX------------------------------------QQSQVT----VWDFSLEAAFAEDVSAAMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAELGERVVASDRRSLPAGPSLASEQSIPSLASPTGAAAT-ASPMSTLTEVEEEEAGREGEAVEKGSAAARG--------GKRKGRATTEPPGGALGSKKGSGNGVGDTV-APKNGSNLGRPCHAVPALVTTTGRVARTESLTGSTSAVAAP 426
BLAST of mRNA_E-fasciculatus_F_contig11908.1497.1 vs. uniprot
Match: A0A6A5AMX4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AMX4_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.680e-44 Identity = 98/241 (40.66%), Postives = 125/241 (51.87%), Query Frame = 3
Query: 3 KLLASTHGDHTVKITDFLRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGRMLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISPSRPAEVSFLLQVWDFSLEAALVED--VSAAMTRERVLLSRALLYNDGGFDVSEDGLWL--CT 713
K ASTHGDHTVKI F GR++Q+L GHPRTPW+VKFHP + R VASGC+G ++R W+ TG+CL+ TL AIIS+SFHP G +L IAS VY WDY + P IA + TLR V F P P++++ L +W+F L ++ + S AM VLL+ ALLYNDGGFDVS+ G +L CT
Sbjct: 59 KTFASTHGDHTVKIVCFATGRILQTLVGHPRTPWSVKFHPTNPRYVASGCLGYQIRFWDVVTGKCLYEATLRHAIISVSFHPCGTVLGIASGTCVYTWDYQQHSIPRIAMFSNQTLRSVSFLPDPTKILVGEANEKYTRPLGTV-------------------------------------PSDLTVTLTLWEFDLAWSVASEPSTSKAMYSPHVLLTHALLYNDGGFDVSKCGQYLAVCT 262
BLAST of mRNA_E-fasciculatus_F_contig11908.1497.1 vs. uniprot
Match: A0A5D6XLM1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLM1_9STRA) HSP 1 Score: 174 bits (442), Expect = 4.460e-42 Identity = 103/247 (41.70%), Postives = 127/247 (51.42%), Query Frame = 3
Query: 3 KLLASTHGDHTVKITDFLRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGRMLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISPSRPAEVSFLLQVWDFSLEAALVED---VSAAMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAELRER 734
K ASTHGDHTVKI F GR++Q+L GHPRTPW+VKFHP D R VASGC+G +VR W+ TGRCL+ TL AIIS+SFHPSG +LAIAS VY WDY P IA TLR V F P + + P++++ L +WDF AL + V AM +V+LS AL+YNDGGFD+S G +L A+ R
Sbjct: 93 KTFASTHGDHTVKIICFETGRILQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPSGDILAIASGTCVYTWDYQHTC-PRIAMFSYQTLRSVTFLPDPTKIMVGEANERY---------------------------------------LGQAPPSDLTVTLTMWDFDPSWALAPEPLLVKKAMYNSQVVLSHALIYNDGGFDISRCGRYLAICADFSLR 299
BLAST of mRNA_E-fasciculatus_F_contig11908.1497.1 vs. uniprot
Match: A0A7S2P0E3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P0E3_9STRA) HSP 1 Score: 173 bits (439), Expect = 5.080e-42 Identity = 99/250 (39.60%), Postives = 131/250 (52.40%), Query Frame = 3
Query: 9 LASTHGDHTVKITDFLRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGRMLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISPSRPAEVSFLLQVWDFSLEAALVEDVSA------------AMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAE 722
LASTHGDHTVKIT GR++QS++GHPRTPWTVKFHP D+ I ASGC+G +VRVW+ G CL V L +A+ISLSFHP G +L++AS +Y+W+Y + P + H H+LRCV FTPG + SR + + L++WDF EAA+ + + ++ R+ L RALLYNDGGFDVS G +L +E
Sbjct: 105 LASTHGDHTVKITCCATGRLIQSMEGHPRTPWTVKFHPSDSGICASGCLGHQVRVWDTKEGVCLKMVRLYSAVISLSFHPRGGLLSMASGNGLYIWNYEKRDSPHPEFMHDHSLRCVSFTPGGDRIIVGGFVKR-----------------------------------------AHSRDKD-THSLRLWDFDYEAAVNQSSPSDNENLNNSTENQMLSNCRIFLHRALLYNDGGFDVSPCGKFLIACSE 312
BLAST of mRNA_E-fasciculatus_F_contig11908.1497.1 vs. uniprot
Match: A0A8K1FJQ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJQ7_PYTOL) HSP 1 Score: 173 bits (439), Expect = 1.020e-41 Identity = 105/252 (41.67%), Postives = 124/252 (49.21%), Query Frame = 3
Query: 3 KLLASTHGDHTVKITDFLRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGRMLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISPSRPAEVSFLLQVWDFSLEAALVEDVSA---AMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAELRERVVASD 749
K ASTHGDHTVKI GR++Q+L GHPRTPW+VKFHP D R VASGC+G +VR W+ TGRCL+ TL AIIS+SFHPSG +LAIAS VY WDY P IA TLR V F P S PA+++ L +WDF AL S AM R +LS AL+YNDGGFD+S G +L A+ R D
Sbjct: 123 KTFASTHGDHTVKIICMQTGRILQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPSGDILAIASGTCVYTWDYQHTC-PRIALFSYQTLRSVTFLPDPTKIMVGEANERYMQRPIGQN--------------------------------GQSHPADLTVTLTLWDFDPSWALSPQPSENTKAMNNSREILSHALIYNDGGFDISRCGRYLAICADFSLRQAEKD 341
BLAST of mRNA_E-fasciculatus_F_contig11908.1497.1 vs. uniprot
Match: D0N3A2_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0N3A2_PHYIT) HSP 1 Score: 171 bits (434), Expect = 1.580e-41 Identity = 102/247 (41.30%), Postives = 124/247 (50.20%), Query Frame = 3
Query: 3 KLLASTHGDHTVKITDFLRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGRMLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISPSRPAEVSFLLQVWDFSLEAALVED---VSAAMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAELRER 734
K ASTHGDHTVKI G+V+Q+L GHPRTPW+VKFHP D R VASGC+G +VR W+ TGRCL+ TL AIIS+SFHPSG +LAIAS VY WDY P IA TLR V F P + P++++ L +WDF AL + AM RV+LS AL+YNDGGFD+S G +L A+ R
Sbjct: 94 KTFASTHGDHTVKIICIETGKVIQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPSGDILAIASGTCVYTWDYQHTC-PRIAMFSYQTLRSVTFLPDPSKIMVGEANERYVRPQ------------------------------------GQAPPSDLTVTLTMWDFDPSWALSPEPLLTKKAMNNSRVILSHALIYNDGGFDISRCGRYLAICADFSLR 303
BLAST of mRNA_E-fasciculatus_F_contig11908.1497.1 vs. uniprot
Match: W4GBB9_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GBB9_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.640e-41 Identity = 98/241 (40.66%), Postives = 125/241 (51.87%), Query Frame = 3
Query: 3 KLLASTHGDHTVKITDFLRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGRMLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISPSRPAEVSFLLQVWDFSLEAALVED--VSAAMTRERVLLSRALLYNDGGFDVSEDGLWL--CT 713
K ASTHGDHTVKI F GR++Q+L GHPRTPW+VKFHP + R VASGC+G ++R W+ TG+CL+ TL AIIS+SFHP G +L IAS VY WDY + P IA + TLR V F P P++++ L +W+F L ++ + S AM VLL+ ALLYNDGGFDVS+ G +L CT
Sbjct: 110 KTFASTHGDHTVKIVCFATGRILQTLVGHPRTPWSVKFHPTNPRYVASGCLGYQIRFWDVVTGKCLYEATLRHAIISVSFHPCGTVLGIASGTCVYTWDYQQHSIPRIAMFSNQTLRSVSFLPDPTKILVGEANEKYTRPLGTV-------------------------------------PSDLTVTLTLWEFDLAWSVASEPSTSKAMYSPHVLLTHALLYNDGGFDVSKCGQYLAVCT 313
BLAST of mRNA_E-fasciculatus_F_contig11908.1497.1 vs. uniprot
Match: K3WK65_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK65_GLOUD) HSP 1 Score: 172 bits (436), Expect = 1.740e-41 Identity = 102/247 (41.30%), Postives = 127/247 (51.42%), Query Frame = 3
Query: 3 KLLASTHGDHTVKITDFLRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGRMLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISPSRPAEVSFLLQVWDFSLEAALVED---VSAAMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAELRER 734
K ASTHGDHTVKI F GR++Q+L GHPRTPW+VKFHP D R VASGC+G +VR W+ TGRCL+ TL AIIS+SFHPSG +LAIAS VY WDY + P IA TLR V F P + P++++ L +WDF +L + V AM +V+LS AL+YNDGGFD+S G +L A+ R
Sbjct: 93 KTFASTHGDHTVKIICFETGRILQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPSGDILAIASGTCVYTWDYQHTS-PRIAMFSYQTLRSVTFLPDPTKIMVGEANERYLRPQ------------------------------------GQAPPSDLTVTLTMWDFDPSWSLAPEPLLVKKAMYNSQVVLSHALIYNDGGFDISRCGRYLSICADFSLR 302
BLAST of mRNA_E-fasciculatus_F_contig11908.1497.1 vs. uniprot
Match: G4YU78_PHYSP (Uncharacterized protein n=25 Tax=Phytophthora TaxID=4783 RepID=G4YU78_PHYSP) HSP 1 Score: 171 bits (432), Expect = 2.860e-41 Identity = 102/247 (41.30%), Postives = 124/247 (50.20%), Query Frame = 3
Query: 3 KLLASTHGDHTVKITDFLRGRVVQSLQGHPRTPWTVKFHPKDARIVASGCIGSEVRVWNASTGRCLHSVTLEAAIISLSFHPSGRMLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISPSRPAEVSFLLQVWDFSLEAALVED---VSAAMTRERVLLSRALLYNDGGFDVSEDGLWLCTIAELRER 734
K ASTHGDHTVKI G+V+Q+L GHPRTPW+VKFHP D R VASGC+G +VR W+ TGRCL+ TL AIIS+SFHPSG +LAIAS VY WDY P IA TLR V F P + P++++ L +WDF AL + AM RV+LS AL+YNDGGFD+S G +L A+ R
Sbjct: 94 KTFASTHGDHTVKIICIETGKVLQTLVGHPRTPWSVKFHPTDPRYVASGCLGFQVRFWDIETGRCLYVSTLRHAIISISFHPSGDILAIASGTCVYTWDYQHTC-PRIAMFSYQTLRSVTFLPDPSKIMVGEANERYVRPQ------------------------------------GQAPPSDLTVTLTMWDFDPSWALSPEPLLTKKAMNNSRVILSHALIYNDGGFDISRCGRYLAICADFSLR 303 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11908.1497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11908.1497.1 >prot_E-fasciculatus_F_contig11908.1497.1 ID=prot_E-fasciculatus_F_contig11908.1497.1|Name=mRNA_E-fasciculatus_F_contig11908.1497.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=470bp MLAIASSLYVYLWDYNSKARPFIAWAHSHTLRCVRFTPGGGGIIVGAANSback to top mRNA from alignment at E-fasciculatus_F_contig11908:3..3985- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11908.1497.1 ID=mRNA_E-fasciculatus_F_contig11908.1497.1|Name=mRNA_E-fasciculatus_F_contig11908.1497.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3983bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11908:3..3985- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11908:3..3985- >mRNA_E-fasciculatus_F_contig11908.1497.1 ID=mRNA_E-fasciculatus_F_contig11908.1497.1|Name=mRNA_E-fasciculatus_F_contig11908.1497.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2820bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11908:3..3985- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |