mRNA_E-fasciculatus_F_contig11904.1496.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11904.1496.1 vs. uniprot
Match: D8LJ00_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ00_ECTSI) HSP 1 Score: 302 bits (773), Expect = 1.590e-100 Identity = 158/161 (98.14%), Postives = 160/161 (99.38%), Query Frame = 1
Query: 7 IQVPVPINLIVTSTLILYIGSHRSLRLRDKTSVEACESETLSKEAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 489
+ VPVP+NLIVTSTLILYIGSHRSLRLRDKTSVEACESETLSKEAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ
Sbjct: 18 VLVPVPVNLIVTSTLILYIGSHRSLRLRDKTSVEACESETLSKEAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 178
BLAST of mRNA_E-fasciculatus_F_contig11904.1496.1 vs. uniprot
Match: A0A835Z5W1_9STRA (Putative aspartyl protease family A22B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5W1_9STRA) HSP 1 Score: 166 bits (419), Expect = 6.060e-47 Identity = 86/163 (52.76%), Postives = 117/163 (71.78%), Query Frame = 1
Query: 1 KIIQVPVPINLIVTSTLILYIGSHRSLRLRDKTSVEACESETLSKEAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 489
+++ +PVP+NLI ST+I+Y+G+HRSLRLRDK + ESETLSKE AMK P+VGS L +Y LFK +D +VN++L YF+ +G+ LA T DP LV + ++ +G KF LP +GEVDLTFT + LVS G+AF A Y +T+HW +NNI G++FCVQ
Sbjct: 32 QVVLIPVPVNLISMSTIIIYVGAHRSLRLRDKAHPDNAESETLSKEDAMKFPLVGSATLFGLYMLFKLLDKDMVNLVLSVYFSGMGALTLAGTFDP-LVHVVVKSETL-YGRKFNLPWVGEVDLTFTPSGLVSLAFGLAFGAVYFQTKHWTMNNILGISFCVQ 192
BLAST of mRNA_E-fasciculatus_F_contig11904.1496.1 vs. uniprot
Match: A0A7S2V0H1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0H1_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.330e-43 Identity = 78/165 (47.27%), Postives = 115/165 (69.70%), Query Frame = 1
Query: 13 VPVPINLIVTSTLILYIGSHRSLRLRDKTSVEAC------ESETLSKEAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 489
+PVP+NLIVT+T I+Y+GSH S++L +K + A E E L++ A K P++GS L +Y +FK++D +VN+LL YF+ IG F + +TVDP++ + + K++GT F LP +G +DLTFT +ELVS ++G AFA Y KT+HWALNN+ G++FCVQ
Sbjct: 34 IPVPLNLIVTATAIVYVGSHSSIKLLEKPELNADGTPKDGEREVLTQADAYKFPIIGSCALFGLYIVFKFLDKDLVNLLLAIYFSVIGMFTIGSTVDPIIHKFIKSE--KKYGTAFTLPYLGNIDLTFTPSELVSLILGTAFAGLYFKTKHWALNNLMGISFCVQ 196
BLAST of mRNA_E-fasciculatus_F_contig11904.1496.1 vs. uniprot
Match: A0A7S0SXT6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXT6_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.220e-34 Identity = 69/164 (42.07%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 7 IQVPVPINLIVTSTLILYIGSHRSLRLRDKTS---VEACESETLSKEAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 489
I +PV INLI+TSTLI+YIGSHRSLRL + + E E ++++ K P+VGS+ L ++Y FKY + IVN++L YF+ IG F L T P L K++G K + GE+D T E++SF++ + FA Y +T+H+ LNN+ G++FC+Q
Sbjct: 26 IAIPVSINLIITSTLIIYIGSHRSLRLLISEADGGIPKSEKEVMTEKDVYKFPIVGSLALFSLYIAFKYFNKDIVNLILSLYFSVIGVFTLTGTFAPFLSPYIPHDKTKKYGFKTSVVYFGEIDALLTIPEVISFILSIIFAVYYFRTKHYMLNNVLGISFCIQ 189
BLAST of mRNA_E-fasciculatus_F_contig11904.1496.1 vs. uniprot
Match: A0A482T1Q9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T1Q9_9ARCH) HSP 1 Score: 128 bits (321), Expect = 1.200e-32 Identity = 73/161 (45.34%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 16 PVPINLIVTSTLILYIGSHRSLRLRDKTS---VEACESETLSKEAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 489
PV +NLIVTST I+YIGS+RSL L + ++ + ETLS A K P +GS L+++Y FKY D VN+LL YF+ +G L ++ + Q T+ R G K + PLIGEVD FT ELVS +I + F+A Y KT+H+ +NNI G++FC+Q
Sbjct: 27 PVALNLIVTSTAIVYIGSYRSLNLLVSEADGGLKKEDKETLSANDAYKFPFIGSAALLSLYIAFKYFDKDTVNLLLSLYFSLVGVLTLTGSLSKFVSQFL--TNPARFGFKQKFPLIGEVDALFTFAELVSLMISIIFSAVYFKTKHFMMNNILGISFCIQ 185
BLAST of mRNA_E-fasciculatus_F_contig11904.1496.1 vs. uniprot
Match: W7T3L6_9STRA (Signal peptide peptidase family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3L6_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.120e-32 Identity = 71/164 (43.29%), Postives = 104/164 (63.41%), Query Frame = 1
Query: 1 KIIQVPVPINLIVTSTLILYIGSHRSLRLRDKTSV-EACESETLSKEAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 489
++ +PV NL+ TS I+YIG HRSL+LRDK ++ + + ET+SKE A K P++GS VL +Y FK+ D VN LL YF+ IG+ L T +P + ++ + G F LPL+G++DL FT EL + V+ VA A + +++HW LNN FG+ FC+Q
Sbjct: 151 NVVLIPVTFNLLATSLAIIYIGCHRSLQLRDKGAMSDEDQLETISKEDAYKFPLIGSCVLFGLYAAFKFFDKDWVNWLLAVYFSIIGAAMLTCTFEPPAAYVLRSSASYGVG-PFSLPLLGKMDLRFTQAELAAGVVAVALAGCWFQSKHWMLNNGFGIAFCIQ 313
BLAST of mRNA_E-fasciculatus_F_contig11904.1496.1 vs. uniprot
Match: A0A8K1FN56_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FN56_PYTOL) HSP 1 Score: 106 bits (264), Expect = 2.460e-24 Identity = 58/162 (35.80%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 7 IQVPVPINLIVTSTLILYIGSHRSLRLRDKTSVEACESETLSK-EAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 489
+ +PVP+ LI ++T I+YIG+ SL+L+ +++ + K E A P++GS VL +Y LFK D +VN+LL +YF IG+++L P+L QI + + ++P G +L T +++FV AFA A+ KT+H+ LNNIFG++ ++
Sbjct: 23 VLIPVPVQLITSATAIIYIGATLSLKLKHHREASGEKNDEVMKAEDAYMFPLLGSGVLFGLYMLFKIFDKDLVNLLLTSYFALIGTYSLTEAFSPLLKQILFSKNKSSFQRNIKIPFYGVYELVLTPAWMLTFVFAAAFATAWFKTKHFLLNNIFGISLSIK 184
BLAST of mRNA_E-fasciculatus_F_contig11904.1496.1 vs. uniprot
Match: A0A1W0A2D6_9STRA (Aspartyl protease family A22B n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2D6_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.630e-24 Identity = 66/167 (39.52%), Postives = 101/167 (60.48%), Query Frame = 1
Query: 1 KIIQVPVPINLIVTSTLILYIGSHRSLRL---RDKTSVEACESETLSKEAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTK-FELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 489
++ +PV LIV++T I+YIGS SL+L RD T + E ++KE A P++GS +L +Y LFK+ D IVN+LL AYF IG+++L PV V+ +D +RH + FELP G+ + T + + V FAAA+ +T+H+ LNNIFG++ ++
Sbjct: 21 NVVLLPVNFQLIVSATSIVYIGSTLSLKLKQHRDATGEK--NEEAMTKEDAYMFPIIGSGMLFGLYLLFKFFDKDIVNLLLTAYFALIGTYSLTEAFSPV-VRAIAFSDNERHFKRSFELPYFGKQTIDLTPSWCTTGVFAAGFAAAWFQTKHFVLNNIFGISLSIK 184
BLAST of mRNA_E-fasciculatus_F_contig11904.1496.1 vs. uniprot
Match: A0A2D4BV91_PYTIN (Aspartyl protease family A22B, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV91_PYTIN) HSP 1 Score: 105 bits (262), Expect = 5.030e-24 Identity = 60/162 (37.04%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 7 IQVPVPINLIVTSTLILYIGSHRSLRLRDKTSVEACESETLSK-EAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 489
+ +PVP+ LI ++T I+YIGS SL+L+ ++E + K E A P++GS VL +Y LFK D +VN+LL +YF IG+++L P++ + + K ++P G DL T +++FV AFAAA+ KT+H+ LNNIFG++ ++
Sbjct: 23 VLIPVPVQLITSATAIIYIGSTLSLKLKHHRDASGEKNEEVMKAEDAYMFPLLGSGVLFGLYVLFKIFDKDLVNLLLTSYFALIGAYSLTEAFSPLIRDLVFKGRSNGFKRKLKIPFYGVYDLELTHAWMLTFVFASAFAAAWFKTKHFLLNNIFGISLSIK 184
BLAST of mRNA_E-fasciculatus_F_contig11904.1496.1 vs. uniprot
Match: A0A0C9QNB2_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_18749_1749 transcribed RNA sequence n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0C9QNB2_9SPER) HSP 1 Score: 104 bits (260), Expect = 8.080e-24 Identity = 58/162 (35.80%), Postives = 97/162 (59.88%), Query Frame = 1
Query: 4 IIQVPVPINLIVTSTLILYIGSHRSLRLRDKTSVEACESETLSKEAAMKAPVVGSMVLVTIYFLFKYVDAKIVNMLLLAYFTFIGSFALAATVDPVLVQIFGTTDAKRHGTKFELPLIGEVDLTFTATELVSFVIGVAFAAAYAKTRHWALNNIFGMTFCVQ 489
+++V +N+++T+ L +YIG HRS++ A SET+SKE AM+ P++GS+VL +++ LFK++ +VN +L YF +G AL+AT+ P ++ F + LP V++ FT +++V+ + G F YA +HW NNI G+ FC+Q
Sbjct: 21 VVKVNPNVNVVLTACLTVYIGCHRSVK-------PAPPSETMSKEHAMRFPLIGSVVLFSLFLLFKFLSKDLVNAILTCYFFVLGIIALSATLLPA-IERFLPKQWNEVPINWHLPYFRSVEIEFTKSQVVAAIPGTFFCTWYALKKHWLANNILGLAFCIQ 174 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11904.1496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11904.1496.1 >prot_E-fasciculatus_F_contig11904.1496.1 ID=prot_E-fasciculatus_F_contig11904.1496.1|Name=mRNA_E-fasciculatus_F_contig11904.1496.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=163bp KIIQVPVPINLIVTSTLILYIGSHRSLRLRDKTSVEACESETLSKEAAMKback to top mRNA from alignment at E-fasciculatus_F_contig11904:2370..4180+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11904.1496.1 ID=mRNA_E-fasciculatus_F_contig11904.1496.1|Name=mRNA_E-fasciculatus_F_contig11904.1496.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1811bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11904:2370..4180+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11904:2370..4180+ >mRNA_E-fasciculatus_F_contig11904.1496.1 ID=mRNA_E-fasciculatus_F_contig11904.1496.1|Name=mRNA_E-fasciculatus_F_contig11904.1496.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=978bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11904:2370..4180+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |