mRNA_E-fasciculatus_F_contig11902.1495.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11902.1495.1 vs. uniprot
Match: RBL_ECTSI (Ribulose bisphosphate carboxylase large chain n=2255 Tax=PX clade TaxID=569578 RepID=RBL_ECTSI) HSP 1 Score: 975 bits (2521), Expect = 0.000e+0 Identity = 477/488 (97.75%), Postives = 485/488 (99.39%), Query Frame = 2
Query: 98 MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATMEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKTEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLQINLAEGLFFDMDWAALRKCVPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPEILRRAATTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGSR 1561
MPEDVQNRTRIKSERYESGVIPYAKMGYWDADY +KDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRP LGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAAT+EQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARK E+ILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHL+INLAEGLFFDMDWA+LRKCVPVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGP+ILRRAA+TCGPLKAALDLWKDITFDYTSTDTPDFVEVATGSR
Sbjct: 1 MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYKLKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATVEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKAEVILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLKINLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPDILRRAASTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGSR 488
BLAST of mRNA_E-fasciculatus_F_contig11902.1495.1 vs. uniprot
Match: A0A858LFZ1_9STRA (Ribulose bisphosphate carboxylase large chain n=9 Tax=Ochrophyta TaxID=2696291 RepID=A0A858LFZ1_9STRA) HSP 1 Score: 909 bits (2349), Expect = 0.000e+0 Identity = 440/488 (90.16%), Postives = 469/488 (96.11%), Query Frame = 2
Query: 98 MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATMEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKTEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLQINLAEGLFFDMDWAALRKCVPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPEILRRAATTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGSR 1561
M ++VQ RTRIKSERYESGVIPYAKMGYWDADYN+K TDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQFFAYIAYEC+LFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIP++YLKTFQGPATG++VERER+DKFGRPLLGATVKPKLGLSGKNYGRVVYEGL GGLDFLKDDENINSQPFMRW+ERFLYCMEGVNRA+AATGEVKGSYLN TAAT+E+MYERA YA IGS+I+M+DLVIGYTAIQ+MAIWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMVKGFYN+LL T L INL++GLFFDMDWA+LRK VPVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQ+GATANRVALE+MVLARNEGRDY+ EGP+ILR AA TCGPLK ALDLWKDITFDYTSTDTPDFVEVAT S+
Sbjct: 1 MSKNVQERTRIKSERYESGVIPYAKMGYWDADYNIKHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYIAYECELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFSYLKTFQGPATGLIVERERMDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGVNRASAATGEVKGSYLNTTAATIEEMYERALYAKEIGSIIIMVDLVIGYTAIQTMAIWARKHDMILHLHRAGNSTYARQKNHGINFRVICKWMRMSGVDHIHAGTVVGKLEGDPLMVKGFYNTLLETKLSINLSQGLFFDMDWASLRKVVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYLNEGPQILRDAAKTCGPLKTALDLWKDITFDYTSTDTPDFVEVATESK 488
BLAST of mRNA_E-fasciculatus_F_contig11902.1495.1 vs. uniprot
Match: Q8HSH1_9STRA (Ribulose bisphosphate carboxylase large chain n=106 Tax=root TaxID=1 RepID=Q8HSH1_9STRA) HSP 1 Score: 902 bits (2332), Expect = 0.000e+0 Identity = 436/488 (89.34%), Postives = 465/488 (95.29%), Query Frame = 2
Query: 98 MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATMEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKTEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLQINLAEGLFFDMDWAALRKCVPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPEILRRAATTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGSR 1561
M + VQ RTRIKS+RYESGVIPYAKMGYWDA YNVK TDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQ+FAYI+Y+C+LFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIP+AYLKTFQGPATG+VVERER+DKFGRP LGATVKPKLGLSGKNYGRVVYEGL GGLDFLKDDENINSQPFMRW+ERFLYCMEGVNRAAAATGE+KGSYLN TA TME+MYERAEYA +G++IVMIDLV+GYTAIQSMAIWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMVKGFYN+LL T L INL +GLFF+M+WAALRK VPVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQ+GATANRVALE+MVLARNEGRDY+ EGP+ILR AA TCGPLK ALDLWKDITFDYTSTDTPDFVE+AT S+
Sbjct: 1 MSKSVQERTRIKSQRYESGVIPYAKMGYWDAFYNVKHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQYFAYISYQCELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGLVVERERMDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGVNRAAAATGEIKGSYLNTTAGTMEEMYERAEYAKQLGTIIVMIDLVVGYTAIQSMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLETKLDINLPQGLFFEMEWAALRKTVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYLNEGPQILRDAAKTCGPLKTALDLWKDITFDYTSTDTPDFVEIATKSK 488
BLAST of mRNA_E-fasciculatus_F_contig11902.1495.1 vs. uniprot
Match: B8LGQ9_9STRA (Ribulose bisphosphate carboxylase large chain n=186 Tax=root TaxID=1 RepID=B8LGQ9_9STRA) HSP 1 Score: 901 bits (2329), Expect = 0.000e+0 Identity = 437/488 (89.55%), Postives = 460/488 (94.26%), Query Frame = 2
Query: 98 MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATMEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKTEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLQINLAEGLFFDMDWAALRKCVPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPEILRRAATTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGSR 1561
M ++VQ RTRIKSERYESGVIPYAKMGYWDADYN+ TDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQFFAYIAY+C+LFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIP+AYLKTFQGPATG+VVERER+DKFGRP LGATVKPKLGLSGKNYGRVVYEGL GGLDFLKDDENINSQPFMRW+ERFLYCMEG+NRAAA+TGEVKGSYLN+TA ME MYERAEYA IGS+IVMIDLVIGYTAIQSM IWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMVKGFYN+LL T L INL +G+FF+MDWA LRK VPVASGGIHCGQMHQL YYLGDDVVLQFGGGTIGHPDGIQ+GATANRVALESMVLARNEGRDY+ EGP+ILR AA CGPLK ALDLWKDITFDYTSTDTPDFVE AT S+
Sbjct: 1 MSKNVQERTRIKSERYESGVIPYAKMGYWDADYNIAHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYIAYQCELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGLVVERERMDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGINRAAASTGEVKGSYLNVTAGNMEDMYERAEYAKVIGSIIVMIDLVIGYTAIQSMGIWARKNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLQTTLDINLPQGIFFEMDWALLRKTVPVASGGIHCGQMHQLTYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMVLARNEGRDYLNEGPQILRDAAKMCGPLKTALDLWKDITFDYTSTDTPDFVETATESK 488
BLAST of mRNA_E-fasciculatus_F_contig11902.1495.1 vs. uniprot
Match: A0A7U0QG21_OLILU (Ribulose bisphosphate carboxylase large chain n=2 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0QG21_OLILU) HSP 1 Score: 884 bits (2285), Expect = 0.000e+0 Identity = 425/483 (87.99%), Postives = 458/483 (94.82%), Query Frame = 2
Query: 110 VQNRTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATMEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKTEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLQINLAEGLFFDMDWAALRKCVPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPEILRRAATTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGS 1558
V RTRIK+ERYESGVIPYAKMGYWD +Y++K+TD+LALFRITPQPGVDP+EAAAAVAGESSTATWTVVWTDLLTACD+YRAKAYRVDPVP ++DQ+FAYIAYECDLFEEGS+ANLTASIIGNVFGFKAV+ALRLEDMRIP AYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGL GGLDFLKDDENINSQPFMRW+ERFLY MEG+NRAAA +GEVKGSYLN TAATME MYERAEYA A+GSVI+MIDLVIGY+AIQSMAIW+R +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMV+GFY SLL T LQ+NL +GLFFDMDWAALRKC+PVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQ+GATANRVALE+MVLARNEGRDYV EGP+ILR AA+TC PL+ ALDLWKDI+F+YTSTDT DFVE AT +
Sbjct: 3 VSERTRIKNERYESGVIPYAKMGYWDGNYSIKETDVLALFRITPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTACDVYRAKAYRVDPVPNSTDQYFAYIAYECDLFEEGSIANLTASIIGNVFGFKAVQALRLEDMRIPIAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMRWRERFLYVMEGINRAAAGSGEVKGSYLNCTAATMEDMYERAEYARAVGSVIIMIDLVIGYSAIQSMAIWSRNNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVQGFYASLLATELQVNLPQGLFFDMDWAALRKCMPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVAEGPQILRTAASTCAPLQTALDLWKDISFNYTSTDTADFVETATAN 485
BLAST of mRNA_E-fasciculatus_F_contig11902.1495.1 vs. uniprot
Match: A0A0H5BNA2_9PHAE (Ribulose bisphosphate carboxylase large chain (Fragment) n=3 Tax=Choristocarpus tenellus TaxID=116065 RepID=A0A0H5BNA2_9PHAE) HSP 1 Score: 884 bits (2284), Expect = 0.000e+0 Identity = 424/470 (90.21%), Postives = 453/470 (96.38%), Query Frame = 2
Query: 152 GVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATMEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKTEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLQINLAEGLFFDMDWAALRKCVPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPEILRRAATTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGSR 1561
GVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVP T++QFFAY+AYECDLFEEGSLANLTASIIGNVFGFKA+ ALRLEDMRIP+AYLKTFQGPATG++VERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGL GGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAA TGEVKGSYLN+TA TME MYERA+YA IG+VI+MIDLVIGY+AIQSMA++ARK ++ILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYN+LLLT L+I+LA+G+FFDMDWA+LRKCVPVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQ+GATANRVALESMVLARNEG DYV +GPEILR AA CGPLKAALDLWKDITF+YTSTDTPDF+E AT ++
Sbjct: 1 GVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPNTANQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAISALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAGTGEVKGSYLNVTAGTMENMYERADYAKQIGTVIIMIDLVIGYSAIQSMAVYARKAQLILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTSLEIDLAQGIFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMVLARNEGVDYVEQGPEILRNAARVCGPLKAALDLWKDITFEYTSTDTPDFIETATEAK 470
BLAST of mRNA_E-fasciculatus_F_contig11902.1495.1 vs. uniprot
Match: RBL_OLILU (Ribulose bisphosphate carboxylase large chain n=38 Tax=root TaxID=1 RepID=RBL_OLILU) HSP 1 Score: 883 bits (2281), Expect = 0.000e+0 Identity = 423/487 (86.86%), Postives = 457/487 (93.84%), Query Frame = 2
Query: 98 MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATMEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKTEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLQINLAEGLFFDMDWAALRKCVPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPEILRRAATTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGS 1558
M +V R RIK++RYESGVIPYAKMGYWDA+Y+VKDTD+LALFR+TPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACD+YRAKAYRVDPVP +DQ+FAYIAYECDLFEEGSLAN+TASIIGNVFGFKAV ALRLEDMRIPYAYLKTFQGPATG++VERERLD FGRPLLGATVKPKLGLSGKNYGRVVYEGL GG+DFLKDDENINSQPFMRW+ERFLYCMEG+NRA+AA+GEVKGSYLN+TAATME+MYERA+YA A+GSVIVMIDLVIGYTAIQSMAIWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMVKGFY+ L T L INL +G+FF+MDWA+LRKC PVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQ+GATANRVALE+M+LARNEGRDYV EGPEILR A CGPLK ALDLWK ITF+YTSTDT DFVE AT +
Sbjct: 1 MSNNVYERNRIKNDRYESGVIPYAKMGYWDANYSVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDVYRAKAYRVDPVPSAADQYFAYIAYECDLFEEGSLANMTASIIGNVFGFKAVAALRLEDMRIPYAYLKTFQGPATGIIVERERLDTFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGIDFLKDDENINSQPFMRWRERFLYCMEGINRASAASGEVKGSYLNVTAATMEEMYERADYAKAVGSVIVMIDLVIGYTAIQSMAIWARKNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYDVLRETELSINLPQGIFFEMDWASLRKCCPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMILARNEGRDYVSEGPEILRDIAKLCGPLKTALDLWKGITFNYTSTDTADFVETATSN 487
BLAST of mRNA_E-fasciculatus_F_contig11902.1495.1 vs. uniprot
Match: A2A0V7_9PHAE (Ribulose bisphosphate carboxylase large chain (Fragment) n=6 Tax=Phaeophyceae TaxID=2870 RepID=A2A0V7_9PHAE) HSP 1 Score: 869 bits (2246), Expect = 8.890e-314 Identity = 418/462 (90.48%), Postives = 448/462 (96.97%), Query Frame = 2
Query: 158 IPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATMEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKTEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLQINLAEGLFFDMDWAALRKCVPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPEILRRAATTCGPLKAALDLWKDITFDYTSTDTPDFVE 1543
IPYAKMGYWDADY+VK+TD+L+LFRITPQPGVDP+EAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVP T+DQFFAYIAY+ DLFEEGSLANLTASIIGNVFGFKAVKALRLEDMR+P AYLKT+QGPATGV+VERERLD FGRPLLGATVKPKLGLSGKNYGRVVYEGL GGLDFLKDDENINSQPFMRWKER+LYCMEGVNRAAAATGEVKG+YLNIT+AT+E MYERAEYA AIG+VIVMIDLVIGYTAIQ+MAIWARK +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMVKGFYN+LLLT L+I+LA+G+FFDMDWA+LRKC+PVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQ+GATANRVALESM+LARNEGR+YV EGPEILR AA TCGPLK ALDLWKDITF+YTSTDTPDF+E
Sbjct: 1 IPYAKMGYWDADYSVKETDVLSLFRITPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPNTTDQFFAYIAYDIDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRLPIAYLKTYQGPATGVIVERERLDTFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERYLYCMEGVNRAAAATGEVKGTYLNITSATIEHMYERAEYARAIGTVIVMIDLVIGYTAIQTMAIWARKAQMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELEIDLAQGIFFDMDWASLRKCLPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGREYVPEGPEILRDAAKTCGPLKTALDLWKDITFEYTSTDTPDFLE 462
BLAST of mRNA_E-fasciculatus_F_contig11902.1495.1 vs. uniprot
Match: A0A3R5QND5_9STRA (Ribulose bisphosphate carboxylase large chain n=93 Tax=Eukaryota TaxID=2759 RepID=A0A3R5QND5_9STRA) HSP 1 Score: 868 bits (2242), Expect = 9.320e-313 Identity = 419/485 (86.39%), Postives = 453/485 (93.40%), Query Frame = 2
Query: 98 MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATMEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKTEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLQINLAEGLFFDMDWAALRKCVPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPEILRRAATTCGPLKAALDLWKDITFDYTSTDTPDFVEVAT 1552
M + V+ RTRIK+ERYESGVIPYA+MGYWDA Y VKDTD+LALFRITPQPGVDP+EAAAAVAGESSTATWTVVWTDLLTACDIYRAKAY+VDPVPG +DQ+F YIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVV+EGL GGLDFLKDDENINSQPFMRW+ERF Y MEGVNR+AAA+GEVKGSYLN+TA TME MYERAE+A IGSVI+MIDLVIGYTAIQSMA+WAR+ +MILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMVKGFYN LLLT L++NL +G+FFDMDWA+LRK +PVASGGIHCGQMHQL++YLG+D VLQFGGGTIGHPDGI SGATANRVALESM+LARNEGRDY+ EGP+ILR AA C PL+ ALDLWKDI F+Y+STDT DFVE T
Sbjct: 1 MFQSVEERTRIKNERYESGVIPYAEMGYWDAAYTVKDTDVLALFRITPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYKVDPVPGAADQYFGYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVFEGLRGGLDFLKDDENINSQPFMRWRERFAYVMEGVNRSAAASGEVKGSYLNVTAGTMENMYERAEFAKLIGSVIIMIDLVIGYTAIQSMAVWARQNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNVLLLTDLEVNLPQGIFFDMDWASLRKVLPVASGGIHCGQMHQLLHYLGEDCVLQFGGGTIGHPDGIASGATANRVALESMLLARNEGRDYLKEGPKILRTAAEQCTPLRVALDLWKDIAFNYSSTDTADFVETTT 485
BLAST of mRNA_E-fasciculatus_F_contig11902.1495.1 vs. uniprot
Match: M1K554_DIALT (Ribulose bisphosphate carboxylase large chain n=8 Tax=Eukaryota TaxID=2759 RepID=M1K554_DIALT) HSP 1 Score: 862 bits (2228), Expect = 1.300e-310 Identity = 413/487 (84.80%), Postives = 453/487 (93.02%), Query Frame = 2
Query: 98 MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATMEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKTEMILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLQINLAEGLFFDMDWAALRKCVPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPEILRRAATTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGS 1558
M ++V++RTRIK+ERYESGVIPYAKMGYWD DY +K+TD+LA+FR+TPQPGVDPVE AAAVAGESSTATWTVVWTDLLTACD+YRAKA+RVDPVP +SDQ+FAYIAY+ DLFEEGSLANLTASIIGNVFGFKA+KALRLEDMRIPYAYLKTFQGPATGV+VERER+DKFGRPLLGATVKPKLGLSGKNYGRVVYEGL GGLDFLKDDENINSQPFMRW+ERFL+ MEGVNRAAA +GEVKG YLN TA+TME+MY RA+YA +GS+IVMIDLVIGYTAIQ+M IWARK + ILHLHRAGNSTY+RQKNHG+NFRVICKWMRM GVDHIHAGTVVGKLEGDPLMVKGFYN+LL INL EGLFF+ DWA+LRKC+PVASGGIHCGQMHQLI YLGDDVVLQFGGGTIGHPDGIQSGATANRVALE MVLARNEGRDY+ EGP+ILR AA TCGPL+ ALDLWKDITF+YTSTDT DF+E AT +
Sbjct: 1 MSQNVESRTRIKNERYESGVIPYAKMGYWDPDYAIKETDVLAMFRLTPQPGVDPVECAAAVAGESSTATWTVVWTDLLTACDLYRAKAFRVDPVPNSSDQYFAYIAYDIDLFEEGSLANLTASIIGNVFGFKALKALRLEDMRIPYAYLKTFQGPATGVIVERERMDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMRWRERFLFSMEGVNRAAAGSGEVKGHYLNATASTMEEMYTRADYAKELGSIIVMIDLVIGYTAIQTMGIWARKNDTILHLHRAGNSTYSRQKNHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLENKTDINLPEGLFFEQDWASLRKCMPVASGGIHCGQMHQLIEYLGDDVVLQFGGGTIGHPDGIQSGATANRVALECMVLARNEGRDYLSEGPQILRDAAKTCGPLQTALDLWKDITFNYTSTDTADFIETATAN 487 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11902.1495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11902.1495.1 >prot_E-fasciculatus_F_contig11902.1495.1 ID=prot_E-fasciculatus_F_contig11902.1495.1|Name=mRNA_E-fasciculatus_F_contig11902.1495.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=489bp MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYNVKDTDILALFRITPQPback to top mRNA from alignment at E-fasciculatus_F_contig11902:2102..4227+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11902.1495.1 ID=mRNA_E-fasciculatus_F_contig11902.1495.1|Name=mRNA_E-fasciculatus_F_contig11902.1495.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2126bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11902:2102..4227+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11902:2102..4227+ >mRNA_E-fasciculatus_F_contig11902.1495.1 ID=mRNA_E-fasciculatus_F_contig11902.1495.1|Name=mRNA_E-fasciculatus_F_contig11902.1495.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2934bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11902:2102..4227+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |