mRNA_E-fasciculatus_F_contig1190.1491.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1190.1491.1 vs. uniprot
Match: D8LRL2_ECTSI (Pterin-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL2_ECTSI) HSP 1 Score: 481 bits (1239), Expect = 3.700e-157 Identity = 247/265 (93.21%), Postives = 258/265 (97.36%), Query Frame = 1
Query: 937 GGGVATAVEHAMKMVRDGADVLDIGGESTRPGAAEVSPEEEICRIVPVIEGIRAAATAGGEAAAGEGDDADTIGPVTITVDTRRASVAEAAVAAGADAVNDVSGGTFDPRMLATVARAGVPLMMMHMRGTPRTMTSLTDYGGNVVGEVSQSLEACSRAADIAGIPRWMHVLDPGIGFAKTHSQSLLLMRELDVIAERVGSPLLVGPSRKRFIGELTSESDPMERDWGTVGACCSAAERGAKLVRVHNVRGAVQALAVSDAIRNEG 1731
GGGVATAVEH +KM RDGADVLDIGGESTRPGAAEVSPEEEI R+VPVIEGIR AATAGGEAAAGEGDDADTIGPVTITVDTRRA+VAEAAVAAGADAVNDVSGGTFDP+MLATVAR GVPLMMMHMRGTP+TMTSLTDYGGNVVGEVSQSLEACSRAADIAG+PRWMHVL+PGIGFAKTHSQSLLLMRELDVIA+ VGSPLLVGPSRKRFIGELTSESDP++RDWGTVGACCSAAERGAKLVRVHNV+GAV ALAVSDAIRNEG
Sbjct: 316 GGGVATAVEHGLKMARDGADVLDIGGESTRPGAAEVSPEEEISRVVPVIEGIRDAATAGGEAAAGEGDDADTIGPVTITVDTRRAAVAEAAVAAGADAVNDVSGGTFDPQMLATVARTGVPLMMMHMRGTPQTMTSLTDYGGNVVGEVSQSLEACSRAADIAGVPRWMHVLNPGIGFAKTHSQSLLLMRELDVIAKHVGSPLLVGPSRKRFIGELTSESDPIQRDWGTVGACCSAAERGAKLVRVHNVKGAVLALAVSDAIRNEG 580
BLAST of mRNA_E-fasciculatus_F_contig1190.1491.1 vs. uniprot
Match: A0A6H5JQ34_9PHAE (Pterin-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ34_9PHAE) HSP 1 Score: 412 bits (1059), Expect = 1.220e-132 Identity = 225/283 (79.51%), Postives = 244/283 (86.22%), Query Frame = 1
Query: 940 GGVATAVEHAMKMVRDGADVLDIGGESTR-------PGAAEVSPEEEICRIVPVIEGIRAAATAGGEAAAGEGDDAD------TIGPVTITVDTRRASVAEAAVAAGADAVNDVSGGTFDPRMLATVARAGVPLMMMHMRGTPRTMTSLTDYGGNVVGEVSQSLEACSRAADIAGIPRWMHVLDPGIGFAKTHSQSLLLMRELDVIAERVGSPLLVGPSRKRFIGELTSESDPMERDWGTVGACCSAAERGAKLVRVHNVRGAVQALAVSDAIRNEG*AKDKD 1749
GGVATAVEHA++M+RDGAD+LDIGGESTR PGAAEVSPEEEI R+VPVI+GIRAAATAGGEAAAGEGDD TIGPVTITVDTRRA+VAEAA+AAGADAVNDVSGGTFDPRMLATVARAGVPL+MMHMRGTP+TMTSLTDYGGN+VGEVS SLEACSRAADI+G+P SLLLMR+LDVIA+ VGSPLLVGPSRKRFIGELTSESDP++RDWGTVGACCSAAERG KLVRVHNV+GAVQALAV+DAIRNEG KDKD
Sbjct: 154 GGVATAVEHALQMLRDGADMLDIGGESTRQAKRLALPGAAEVSPEEEISRVVPVIQGIRAAATAGGEAAAGEGDDCXXXXXXATIGPVTITVDTRRAAVAEAALAAGADAVNDVSGGTFDPRMLATVARAGVPLVMMHMRGTPQTMTSLTDYGGNIVGEVSYSLEACSRAADISGVP------------------SLLLMRQLDVIAKHVGSPLLVGPSRKRFIGELTSESDPVQRDWGTVGACCSAAERGVKLVRVHNVKGAVQALAVADAIRNEG--KDKD 416
BLAST of mRNA_E-fasciculatus_F_contig1190.1491.1 vs. uniprot
Match: A0A6H5JPW0_9PHAE (HPPK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW0_9PHAE) HSP 1 Score: 261 bits (668), Expect = 1.460e-78 Identity = 138/165 (83.64%), Postives = 147/165 (89.09%), Query Frame = 3
Query: 51 MSMSPSHHRALLLRNGRMLHGRSRRPSTSTC---TASSVPTSTGSLLDFGLRRGGTRVRGLATVYLGLGSNVGDRHANLLRAYKGLREFGEVDATSLLYETPPMYVEDQPWFLNAACRFNTDLGPAVLLDRLKALEAAVGRKDTARWGPRAVDVDILLYDDLVLD 536
MS++ S +RALL RNGRML G RPST+TC +SSVP+S GSLLDFG RRGG VR LATVYLGLGSNVGDRHANLLRAYKGLREFGEVDATSLLYETPPMYVE+QPWFLNAACR +TDL PAVLL+RLKALEAAVGRKDTARWGPRAVDVDILLYDDLVLD
Sbjct: 1 MSVTLSRYRALLPRNGRMLPGCPLRPSTTTCMHPASSSVPSSRGSLLDFGRRRGGASVRSLATVYLGLGSNVGDRHANLLRAYKGLREFGEVDATSLLYETPPMYVENQPWFLNAACRLSTDLAPAVLLERLKALEAAVGRKDTARWGPRAVDVDILLYDDLVLD 165
BLAST of mRNA_E-fasciculatus_F_contig1190.1491.1 vs. uniprot
Match: A0A835YYJ5_9STRA (Dihydropteroate synthase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYJ5_9STRA) HSP 1 Score: 255 bits (651), Expect = 2.140e-71 Identity = 147/298 (49.33%), Postives = 179/298 (60.07%), Query Frame = 1
Query: 913 LSKGDESGGGGVATAVEHAMKMVRDGADVLDIGGESTRPGAAEVSPEEEICRIVPVIEGIRAAATAGGEAAAGEGDDADTIGPVTITVDTRRASVAEAAVAAGADAVNDVSGGTFDPRMLATVARAGVPLMMMHMRGTPRTMTSLTDYGGNVVGEVSQSLEACSRAADIAGIPRWMHVLDPGIGFAKTHSQSLLLMRELDVIAERVGSPLLVGPSRKRFIGELTSESDPM----------------------------ERDWGTVGACCSAAERGAKLVRVHNVRGAVQALAVSDAIR 1722
S G GGGV AV HA M DGAD++DIGGESTRPGA +V E+ R+VPV+ +RAA I+VDTRRA+VA AV AGAD VNDVSGG D MLA VA GVP + MHMRGTP+TMT++TDY +VVG+V+Q+L A S A+ AG+PRW+ VLDPG+GFAKT QS+ L+ L +A PLLVGPSRKRF+G + +RDWGT GA C+AAERGA++VRVH+VRG AL V DA+R
Sbjct: 257 FSDGGRYYGGGVEAAVAHARAMAADGADIIDIGGESTRPGADDVEEAIELERVVPVVAALRAAGVT-----------------TPISVDTRRAAVARGAVRAGADLVNDVSGGAHDGAMLAAVAELGVPYVAMHMRGTPKTMTAMTDYA-DVVGDVTQALSAASARAEAAGVPRWLQVLDPGLGFAKTAPQSVQLLAGLVRVAAATRCPLLVGPSRKRFVGAVAGGXXXXXXXXXXXXXXXXXXXXXXXXXGNALTLEDRDWGTAGAACAAAERGARIVRVHHVRGVKHALRVVDAVR 536
BLAST of mRNA_E-fasciculatus_F_contig1190.1491.1 vs. uniprot
Match: A0A6H1U1S4_9CYAN (Dihydropteroate synthase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1U1S4_9CYAN) HSP 1 Score: 238 bits (608), Expect = 2.340e-68 Identity = 135/262 (51.53%), Postives = 174/262 (66.41%), Query Frame = 1
Query: 946 VATAVEHAMKMVRDGADVLDIGGESTRPGAAEVSPEEEICRIVPVIEGIRAAATAGGEAAAGEGDDADTIGPVTITVDTRRASVAEAAVAAGADAVNDVSGGTFDPRMLATVARAGVPLMMMHMRGTPRTMTSLTDYGGNVVGEVSQSLEACSRAADIAGIPRWMHVLDPGIGFAKTHSQSLLLMRELDVIAERVGSPLLVGPSRKRFIGELTSESDPMERDWGTVGACCSAAERGAKLVRVHNVRGAVQALAVSDAIRNEG 1731
V TA+ A ++V GAD+LD+GG+STRPGA EVSPE+E R+VPV+ +R ++ A T + I+VDT RASVAEAAV AGA VNDVSGG DP+ML T+A GV ++MHMRGTP+TM LTDY +++GE+ + LE AA AGIPR V+DPGIGFAKT+ Q+L ++R++ V R+G P+L+GPSRK FIG L DP +R WGT ACC+A GA +VRVH+V V+DAI G
Sbjct: 45 VETAIARARELVEAGADLLDLGGQSTRPGAREVSPEQERDRVVPVVRSLRDPSS----------PFASTFENLPISVDTTRASVAEAAVEAGATWVNDVSGGLADPQMLPTIAALGVGAILMHMRGTPQTMQQLTDYD-DLIGEIYRVLETQIDAAIAAGIPREKIVVDPGIGFAKTYEQNLEILRKIPVF-RRLGVPVLIGPSRKSFIGHLLDRPDPKQRVWGTAAACCAAIAGGADIVRVHDVAEMADVCRVADAIFRVG 294
BLAST of mRNA_E-fasciculatus_F_contig1190.1491.1 vs. uniprot
Match: A0A350XI34_9CYAN (Dihydropteroate synthase n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A350XI34_9CYAN) HSP 1 Score: 236 bits (603), Expect = 6.850e-68 Identity = 127/255 (49.80%), Postives = 172/255 (67.45%), Query Frame = 1
Query: 955 AVEHAMKMVRDGADVLDIGGESTRPGAAEVSPEEEICRIVPVIEGIRAAATAGGEAAAGEGDDADTIGPVTITVDTRRASVAEAAVAAGADAVNDVSGGTFDPRMLATVARAGVPLMMMHMRGTPRTMTSLTDYGGNVVGEVSQSLEACSRAADIAGIPRWMHVLDPGIGFAKTHSQSLLLMRELDVIAERVGSPLLVGPSRKRFIGELTSESDPMERDWGTVGACCSAAERGAKLVRVHNVRGAVQALAVSDAI 1719
A+ A +V+ GAD+LD+GGESTRPGAAE+SPEEE+ R+VPVI+ IR + V I+VDT +A++A A+V AGAD VND+SG TFDP+ML TVA GVP+++MHMRGTP+TM +TDY +++GE+ Q L+A AA +GI + +LDPGIGFAKT+ Q+L ++R L +G P+L+G SRK FIG + ++SDP R WGT GAC A GA ++RVH+V+ V+DAI
Sbjct: 39 ALAQARYLVKSGADILDVGGESTRPGAAEISPEEELNRVVPVIQAIRRELS------------------VPISVDTTKAAIAYASVKAGADIVNDISGATFDPKMLPTVAELGVPIVLMHMRGTPQTMQKMTDYQ-DLIGEIYQFLQARVEAAIASGIDKSSIILDPGIGFAKTYDQNLEILRRLSEFRS-LGCPILIGVSRKSFIGRIVNQSDPQGRIWGTAGACAGAIASGADILRVHDVQEMRDVCLVADAI 273
BLAST of mRNA_E-fasciculatus_F_contig1190.1491.1 vs. uniprot
Match: B7K2H4_RIPO1 (Dihydropteroate synthase n=1 Tax=Rippkaea orientalis (strain PCC 8801) TaxID=41431 RepID=B7K2H4_RIPO1) HSP 1 Score: 236 bits (601), Expect = 1.450e-67 Identity = 125/256 (48.83%), Postives = 171/256 (66.80%), Query Frame = 1
Query: 952 TAVEHAMKMVRDGADVLDIGGESTRPGAAEVSPEEEICRIVPVIEGIRAAATAGGEAAAGEGDDADTIGPVTITVDTRRASVAEAAVAAGADAVNDVSGGTFDPRMLATVARAGVPLMMMHMRGTPRTMTSLTDYGGNVVGEVSQSLEACSRAADIAGIPRWMHVLDPGIGFAKTHSQSLLLMRELDVIAERVGSPLLVGPSRKRFIGELTSESDPMERDWGTVGACCSAAERGAKLVRVHNVRGAVQALAVSDAI 1719
TA+ A +++ GAD+LDIGG+STRPG+ ++ EEE+ R++P+I+ +R T + I++DT R+SVAEAAV AGAD +ND+SGGTFDP M VAR GVP+++MH+RGTP+TM LTDYG +++ ++SQ LE A AGI R ++DPGIGFAKT+ Q+L L+R L R+G P+LVG SRK FIG + E+DP +R WGT ACCSA + A ++RVH+V V V+DAI
Sbjct: 41 TALTQARNLIKSGADILDIGGQSTRPGSQQIPLEEELNRVIPIIKALRQETT------------------IPISIDTTRSSVAEAAVEAGADLINDISGGTFDPEMFPVVARLGVPIVIMHIRGTPQTMQQLTDYG-DIIQDISQWLEKQLNLAMKAGIKRSHLIIDPGIGFAKTYQQNLELLRRLGEF-RRLGCPMLVGVSRKSFIGHILQENDPKQRIWGTAAACCSAIAQKADVLRVHDVAQMVDVCRVADAI 276
BLAST of mRNA_E-fasciculatus_F_contig1190.1491.1 vs. uniprot
Match: A0A7S1UFL4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFL4_9STRA) HSP 1 Score: 241 bits (616), Expect = 3.170e-67 Identity = 144/266 (54.14%), Postives = 172/266 (64.66%), Query Frame = 1
Query: 943 GVATAVEHAMKMVRDGADVLDIGGESTRPGAAEVSPEEEICRIVPVIEGIRAAATAGGEAAAGEGDDADTIGPVTITVDTRRASVAEAAVAAGADAVNDVSGGTFDPRMLATVARAGVPLMMMHMRGTPRTMTSLTDYGGNVVGEVSQSLEACSRAADIAGIPRWMHVLDPGIGFAKTHS-QSLLLMRELDVIAE---------RVGSPLLVGPSRKRFIGELTSESDPMERDWGTVGACCSAAERGAKLVRVHNVRGAVQALAVS 1710
GVA AVE A+K+V DGADV+DIGGESTRPGAAEV EI R VPVIE +R + V I++DTR+A+VAEAA+AAGAD VNDVSGG FD ML TVAR P ++MHMRGTP TM + Y G VV EV + A AA+ AG+ W +LDPGIGFAK + Q+L L+R L E +V PLLVG SRKRFIGELT E++ +RDWG+VGA +A+ GA +VRVHNV G QAL VS
Sbjct: 204 GVACAVEAALKLVEDGADVVDIGGESTRPGAAEVEVNREIERTVPVIEELRLQSD------------------VVISIDTRKAAVAEAAIAAGADIVNDVSGGAFDAAMLPTVARLEAPYILMHMRGTPDTMNAKAAYEGGVVEEVGSEMRAGVGAAEAAGVCSWDIMLDPGIGFAKKDAAQNLELLRRLRTFVECEELSYDPPQVPCPLLVGASRKRFIGELTGETEAAKRDWGSVGAALAASAGGAFMVRVHNVPGTKQALQVS 451
BLAST of mRNA_E-fasciculatus_F_contig1190.1491.1 vs. uniprot
Match: A0A7S1GH06_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GH06_CYCTE) HSP 1 Score: 234 bits (598), Expect = 3.310e-67 Identity = 133/274 (48.54%), Postives = 178/274 (64.96%), Query Frame = 1
Query: 946 VATAVEHAMKMVRDGADVLDIGGESTRPGAAEVSPEEEICRIVPVIEGIRAAATAGGEAAAGEGDDADTIGPVTITVDTRRASVAEAAVAAGADAVNDVSGGTFDPRMLATVARAGVPLMMMHMRGTPRTMTSLTDYGGNVVGEVSQSLEACSRAADIAGIPRWMHVLDPGIGFAKTHSQSLLLMRELDVIAERVGS-PLLVGPSRKRFIGELTSESDPMERDWGTVGACCSA-----AERGAKLVRVHNVRGAVQALAVSDAI-RNEG*AKDK 1746
+ A + A+++ RDGA ++D+GGESTRPGA EV+ EEE+ R +PVI IR + + I++DTR A VA+AAV AGAD VND+SGG FD MLATVA GVP+++MHMRGTP M S+TDY +VV +V ++L S+AA+ AGIPRW V+DPGIGFAK +LLL++ L + ++G P+L+G SRK FIG++T E ERDWGTV +C +A + G ++RVHNV+G QA DAI R E KD+
Sbjct: 19 IELAAQTALQLERDGAAIIDVGGESTRPGAKEVAVEEELRRTIPVIRRIRE------------------LSEIPISIDTRHADVAKAAVEAGADIVNDISGGQFDENMLATVAELGVPVILMHMRGTPENMLSMTDYD-DVVEDVCEALLERSQAAEAAGIPRWRQVMDPGIGFAKDLRGNLLLLKNLRYLQSKLGDFPILLGTSRKGFIGKITGEPIAAERDWGTVASCVAALCLGDSSPGCHILRVHNVKGTKQATMTMDAIVRAENDQKDQ 273
BLAST of mRNA_E-fasciculatus_F_contig1190.1491.1 vs. uniprot
Match: UPI001684B485 (dihydropteroate synthase n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001684B485) HSP 1 Score: 234 bits (597), Expect = 6.700e-67 Identity = 129/258 (50.00%), Postives = 175/258 (67.83%), Query Frame = 1
Query: 946 VATAVEHAMKMVRDGADVLDIGGESTRPGAAEVSPEEEICRIVPVIEGIRAAATAGGEAAAGEGDDADTIGPVTITVDTRRASVAEAAVAAGADAVNDVSGGTFDPRMLATVARAGVPLMMMHMRGTPRTMTSLTDYGGNVVGEVSQSLEACSRAADIAGIPRWMHVLDPGIGFAKTHSQSLLLMRELDVIAERVGSPLLVGPSRKRFIGELTSESDPMERDWGTVGACCSAAERGAKLVRVHNVRGAVQALAVSDAI 1719
+A AV A ++ GAD++D+GG+STRPGA EVS EEEI R+VPV+ +R AA G A E V I+VDT R+ VA+AA+AAGAD +ND+S GTFDP+ML VA+ GVP+M+MH+RGTP+TM LT+Y +++GE+S+ L AA AGI R ++DPGIGFAK + Q+L ++R++ V + +G PLLVGPSRK FIG + + +P R WGT ACC+A A ++RVH+VR V+DAI
Sbjct: 40 LAAAVAQAQELADAGADIIDVGGQSTRPGALEVSVEEEIERVVPVVRELRKAA---GSTALNE---------VPISVDTARSQVAQAAIAAGADIINDISSGTFDPQMLPVVAQLGVPVMLMHIRGTPQTMQKLTNYQ-DLIGEISEFLTQRIDAAIAAGIERSRIIIDPGIGFAKNYEQNLEILRQMPVF-QSLGCPLLVGPSRKSFIGHILDQPEPKARVWGTAAACCAAVAGAADILRVHDVREMRDVCRVADAI 283 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1190.1491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1190.1491.1 >prot_E-fasciculatus_F_contig1190.1491.1 ID=prot_E-fasciculatus_F_contig1190.1491.1|Name=mRNA_E-fasciculatus_F_contig1190.1491.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=364bp MSMSPSHHRALLLRNGRMLHGRSRRPSTSTCTASSVPTSTGSLLDFGLRRback to top mRNA from alignment at E-fasciculatus_F_contig1190:4940..14187- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1190.1491.1 ID=mRNA_E-fasciculatus_F_contig1190.1491.1|Name=mRNA_E-fasciculatus_F_contig1190.1491.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9248bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1190:4940..14187- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1190:4940..14187- >mRNA_E-fasciculatus_F_contig1190.1491.1 ID=mRNA_E-fasciculatus_F_contig1190.1491.1|Name=mRNA_E-fasciculatus_F_contig1190.1491.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2184bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1190:4940..14187- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |