prot_E-fasciculatus_F_contig1190.1490.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1190.1490.1
Unique Nameprot_E-fasciculatus_F_contig1190.1490.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length722
Homology
BLAST of mRNA_E-fasciculatus_F_contig1190.1490.1 vs. uniprot
Match: A0A6H5JKV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKV8_9PHAE)

HSP 1 Score: 615 bits (1587), Expect = 2.090e-208
Identity = 494/772 (63.99%), Postives = 512/772 (66.32%), Query Frame = 0
Query:    1 RKCRIRGCQRKTLFVGPADTDIDPTAATASTTATTIASEATHCAVHWQEVGFSRQPQETVSLQAGASLLQDGQQAVQQAVHRGSGTEGGNTLLGGHQAAAVGST--------AGRGXXXXXXXXXXXXXXXRPRRASGSLACRIPGCGKRATHGPPAEATHCAAHKEKGQIDHKHRLCENTTPKPCRKQPSFGWPGESRKRFCSAHRQAGTVDLRNCERAGCGTRASHGFGKGKARFCALHSPPGTSLVANR------------------------------------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRVPVACLEHSEGEMVDLKRERMRMAEARKKAPVEAAAAAGAGTVEALAGPGAEEIAGTAVAGRKRARVSGGGLGGNREIGRKIIEAIFTSSQSQRVLEAEGAVAANDESEWEEGSAEDKXXXXXXXXXXXXXXXXMXFHXXXXXXXXXXXXXXXXXXXXXXXXSLSLLPGWGVPRTSPAPQAVGMVADVAAVGCTTQLEAVTEEERGRPAGERVVLSGCAGEASASVGAGGGTTSGPEGXXXXXXXXXRSGEDGASSMTRAGGERGRRRSNNSGVSSSSPANSRCLIVGSPGEDAAAVTVTLVPGQAVGGTANTPSPKKKTSEVGAEVGVEAVPGRGLGGPMTSQXXXXXXXXXXXXXXXXGRQLPPIPILEEMGIGIGTSLTWTC 722
            RKCRIRGCQRKTLFVGPAD D  P A TA  TATTIA EATHCA HW   GF   PQET   Q   S L DGQQ    A HRGSGT GGNTLLGG QAAAVG+         AG+G               RPRRASGSLACRIPGCGKRATHGPPAEAT CAAHKEKGQIDHKHRLCE+TTPKPC KQPSFGWPGESRKRFCSAHR AGTVDLR+CE+AGCGTRASHGFGKG            TSLVANR                                          P                                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRVPVACLEHSEGEMVDLKRERMRMA+ARKKAP E AAAAG GT+EAL  PGAEE+A  AVAGRKRAR SGG LGGNREIGRKII+AIFTSSQ   VL+AE A AAND+SEWEEGSAEDKXXXXXXXXXX      M FH                          +L PG G PRT PAPQ VGMV DVAAVGCT Q EA  E ERG+PAGERV LSG AGEAS   G G   TSG +G         + GE    S TRAGGERGRRRSN+SG  SSSP+N RCLI GS GEDAA  TVT VP  AVGGTANTPSPK KT  VG EVGVEAVPGRGL G M +Q  XXXXXXXXXXX      L PIPILEE  IGIGTSLTW C
Sbjct:    8 RKCRIRGCQRKTLFVGPADND--PAAVTA--TATTIAGEATHCADHWP-AGFRPPPQETAPPQDCGSSLHDGQQDTHSANHRGSGTGGGNTLLGGQQAAAVGNVGETAAGGRAGKGKRKDKGIGGSSVSA-RPRRASGSLACRIPGCGKRATHGPPAEATRCAAHKEKGQIDHKHRLCEDTTPKPCLKQPSFGWPGESRKRFCSAHRPAGTVDLRSCEQAGCGTRASHGFGKGXXXXXXXXXXXXTSLVANRVGQRLGGGXXXXXXXXXXXXXXXXXXXXXXXXXXGHLMLIPCPCEKEGCTVSPRFGDVGGKPRFCASHKESGMVNLKDRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRVPVACLEHSEGEMVDLKRERMRMAQARKKAPAETAAAAGVGTMEALVEPGAEELAVIAVAGRKRARASGG-LGGNREIGRKIIDAIFTSSQL--VLDAESAAAANDDSEWEEGSAEDKXXXXXXXXXXRGPS--MSFHLPPPKLPAPLSAPPPPTP--------TLSPG-GFPRTCPAPQTVGMVPDVAAVGCTAQPEAAAEAERGQPAGERVALSGRAGEASVGAGGGATVTSGRKGGSGDGGGEGKCGE--GRSTTRAGGERGRRRSNSSGAPSSSPSNFRCLIGGSAGEDAATATVTSVPAAAVGGTANTPSPKVKTRAVG-EVGVEAVPGRGLEGAMITQQQXXXXXXXXXXX------LQPIPILEE--IGIGTSLTWIC 748          
BLAST of mRNA_E-fasciculatus_F_contig1190.1490.1 vs. uniprot
Match: D8LRL1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL1_ECTSI)

HSP 1 Score: 542 bits (1397), Expect = 4.410e-169
Identity = 479/668 (71.71%), Postives = 491/668 (73.50%), Query Frame = 0
Query:    1 RKCRIRGCQRKTLFVGPADTDIDPTAATASTTATTIASEATHCAVHWQEVGFSRQPQETVSLQAGASLLQDGQQAVQQAVHRGSGTEGGNTLLGGHQAAAVGS---TAGRGXXXXXXXXXXXXXXX------RPRRASGSLACRIPGCGKRATHGPPAEATHCAAHKEKGQIDHKHRLCENTTPKPCRKQPSFGWPGESRKRFCSAHRQAGTVDLRNCERAGCGTRASHGFGKGKARFCALHSPPGTSLVANRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRVPVACLEHSEGEMVDLKRERMRMAEARKKAPVEAAAAAGAGTVEALAGPGAEEIAGTAVAGRKRARVSGGGLGGNREIGRKIIEAIFTSSQSQRVLEAEGAVAANDESEWEEGSAEDKXXXXXXXXXXXXXXXXMXFHXXXXXXXXXXXXXXXXXXXXXXXXSLSLLPGWGVPRTSPAPQAVGMVADVAAVGCTTQLEAVTEEERGRPAGERVVLSGCAGEASASVGAGGGTTSGPEGXXXXXXXXXRSGEDGASSMTRAGGERGRRRSNNSGVSSSSPANSRCLIVGSPGEDAAAVTVTLVPGQAVGGTANTPSPKKKTSE 659
            RKCRIRGCQRKTLFVGPAD D  P AATA  TATTIA EATHCA HW   GF   PQETV  Q G S LQDGQQ    A HRGSGT GGNTLLG  QAAAVG+   TA  G    XXXXXXXXXXX      RPRRASGSLACRIPGCGKRATHGPPAEAT CAAHKEKGQIDHKHRLCENTTPKPC KQPSFGWPGESRKRFCSAHR AGTVDLRNCE+AGCGTRASHGFGKG            TSLVANRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  TRVPVACLEHSEGEMVDLKRERM                 GA T+EAL   GA E+AGT VAGRKRAR SGG LGGNREIGRKI++AIFTSSQ   VLEAEGA AANDESEWEEGSAEDKXXXXXXXX        M FH                          +L PG  VPRT PAPQAVGMV DVAAVGC  Q EAV EEERG+PAGERV LSGCAGEAS   G G   TSG EG     XXXX                 GRRRS++ G  SSSP+NSRCLI  S GEDAA  TVT VP  AVGGTANTPSPK  T +
Sbjct:    8 RKCRIRGCQRKTLFVGPADND--PAAATA--TATTIAGEATHCADHWP-AGFRPPPQETVLPQDGGSSLQDGQQVTHSADHRGSGTGGGNTLLGRQQAAAVGNVGETAAGGRAGKXXXXXXXXXXXXSSVSARPRRASGSLACRIPGCGKRATHGPPAEATRCAAHKEKGQIDHKHRLCENTTPKPCLKQPSFGWPGESRKRFCSAHRPAGTVDLRNCEQAGCGTRASHGFGKGXXXXXXXXXXXXTSLVANRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTRVPVACLEHSEGEMVDLKRERMXXXXXXXXXXXXXXXXXGARTMEALVEQGAAELAGTTVAGRKRARASGG-LGGNREIGRKIMDAIFTSSQL--VLEAEGAAAANDESEWEEGSAEDKXXXXXXXXGDRGPG--MSFHLPPPKLPAPLSAPPPPTP--------ALSPGV-VPRTCPAPQAVGMVPDVAAVGCAAQPEAVAEEERGQPAGERVALSGCAGEASVGAGGGATVTSGREGGSGDGXXXXXXXX--XXXXXXXXXXXGRRRSSSRGAQSSSPSNSRCLIGVSAGEDAATATVTSVPAAAVGGTANTPSPKMGTKK 654          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1190.1490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKV8_9PHAE2.090e-20863.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRL1_ECTSI4.410e-16971.71EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 343..363

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1190contigE-fasciculatus_F_contig1190:1..2974 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1190.1490.1mRNA_E-fasciculatus_F_contig1190.1490.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1190 1..2974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1190.1490.1 ID=prot_E-fasciculatus_F_contig1190.1490.1|Name=mRNA_E-fasciculatus_F_contig1190.1490.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=722bp
RKCRIRGCQRKTLFVGPADTDIDPTAATASTTATTIASEATHCAVHWQEV
GFSRQPQETVSLQAGASLLQDGQQAVQQAVHRGSGTEGGNTLLGGHQAAA
VGSTAGRGRAGKGRGNGGGSASARPRRASGSLACRIPGCGKRATHGPPAE
ATHCAAHKEKGQIDHKHRLCENTTPKPCRKQPSFGWPGESRKRFCSAHRQ
AGTVDLRNCERAGCGTRASHGFGKGKARFCALHSPPGTSLVANRPCEKEG
CMVSPRFGDVGGKPRFCASHKETGMVNLKDRRCEQHPCTVQPTFAFPGEK
PRFCSKHKAEGHVNVRHKLCRHPQCNLVPTYGMRGTRVPVACLEHSEGEM
VDLKRERMRMAEARKKAPVEAAAAAGAGTVEALAGPGAEEIAGTAVAGRK
RARVSGGGLGGNREIGRKIIEAIFTSSQSQRVLEAEGAVAANDESEWEEG
SAEDKEEEEEEEGEEGGRGSSMSFHMPPPPLPAPLSAPPQPTPTHTPAPS
LSLLPGWGVPRTSPAPQAVGMVADVAAVGCTTQLEAVTEEERGRPAGERV
VLSGCAGEASASVGAGGGTTSGPEGGSGDGSGEGRSGEDGASSMTRAGGE
RGRRRSNNSGVSSSSPANSRCLIVGSPGEDAAAVTVTLVPGQAVGGTANT
PSPKKKTSEVGAEVGVEAVPGRGLGGPMTSQQQQQQQQQQQQQQQQGGRQ
LPPIPILEEMGIGIGTSLTWTC
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