mRNA_E-fasciculatus_F_contig119.1489.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig119.1489.1 vs. uniprot
Match: D8LCW6_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW6_ECTSI) HSP 1 Score: 806 bits (2083), Expect = 9.630e-293 Identity = 413/478 (86.40%), Postives = 422/478 (88.28%), Query Frame = 1
Query: 1 RDIPTRLVGFQVRRLVSALKA----------HCRALSFVHQPSKTMDQAKFEDEMRALAVCVKCLDETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKLAAAFPASRDSWVPPLSSPHGGAAIGKRECEVYVSVCDATGVFSILGMFWKEDEKDRTSQPSGRARLCSLMVKLGKGPVACLESKLQDWEPRTRWAALKTLTVQGSADYVRVTRAMAASLTRRALEDARRSGNDEKKTGGAQGPFPGKFDSAAAYFLDYEGKAGEGGGVDSCGLEEYLTSEAHASFKRTLLECCDGGNSLDVFFFGLLNERREFRDCYSFLEGMAKLGGAENFEDALEKLARQGEEDGGNSDSNTNGRATARLCEHACLCFHLAGLPGAASAMHIAKESCEEDFASSPFVRAMMYRTAYRNSKGEEVPSPKPELSEHYPEMVMKPLQHAQAREHFSTGQHLAQLTPVSVEIKALLEQEILL 1404
RDI T G LVS K H + + TMDQAKFEDEMRALAVCVKCLDETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKLA AFP SRDSWVPPLSSPHGGA I KRECEVYVSVCDATGVFSILGMFWKEDEKDR S S RLCSLMV+LGKGPVACLESKLQDWEPRTRWAALKTLTVQGSADYVRVTRAMAASLTRRALEDARR GN+E KTGGA+G FPGKFDSAAAYFLDYEGKAGEGGGVDSCGLEEYL SEAHASFKRTLLECCDGGNSLDVFFFGLLNERREFRDCYSFLEGMA+LGGAENFEDALEKLARQGE GG SDSNTNGRATA+LCEHACLCFHLAGLPGAASAMHIAKESCEEDFASSPFVRAMMYRTAYRNSKGEEVPSPKPELSE Y +MVMKPLQHAQ +TGQHLAQLTPVSVEIKALLEQEILL
Sbjct: 12 RDITTNQAG-----LVSGAKTGAKAGVDARNHTAVVELISPAIDTMDQAKFEDEMRALAVCVKCLDETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKLAGAFPVSRDSWVPPLSSPHGGAGIAKRECEVYVSVCDATGVFSILGMFWKEDEKDRASSSS---RLCSLMVQLGKGPVACLESKLQDWEPRTRWAALKTLTVQGSADYVRVTRAMAASLTRRALEDARRPGNEENKTGGAKGSFPGKFDSAAAYFLDYEGKAGEGGGVDSCGLEEYLNSEAHASFKRTLLECCDGGNSLDVFFFGLLNERREFRDCYSFLEGMAELGGAENFEDALEKLARQGEA-GGRSDSNTNGRATAKLCEHACLCFHLAGLPGAASAMHIAKESCEEDFASSPFVRAMMYRTAYRNSKGEEVPSPKPELSERYTDMVMKPLQHAQE----ATGQHLAQLTPVSVEIKALLEQEILL 476
BLAST of mRNA_E-fasciculatus_F_contig119.1489.1 vs. uniprot
Match: UPI001F9C2826 (uncharacterized protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=UPI001F9C2826) HSP 1 Score: 59.3 bits (142), Expect = 1.720e-6 Identity = 25/60 (41.67%), Postives = 34/60 (56.67%), Query Frame = 1
Query: 130 EMRALAVCVKCLDETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKLAAAFP 309
E +AVC C E K C+GC + YCSP+ QK HW++HKAFC+ K + +P
Sbjct: 150 EYSPMAVCAGCQREETMDMLTKKCSGCDLTRYCSPDCQKKHWREHKAFCRTPKAVKWVWP 209
BLAST of mRNA_E-fasciculatus_F_contig119.1489.1 vs. uniprot
Match: A0A5E3XSW7_9AGAM (MYND-type domain-containing protein n=1 Tax=Peniophora sp. CBMAI 1063 TaxID=718367 RepID=A0A5E3XSW7_9AGAM) HSP 1 Score: 59.7 bits (143), Expect = 3.860e-6 Identity = 37/96 (38.54%), Postives = 48/96 (50.00%), Query Frame = 1
Query: 46 VSALKAHCRALSF-VHQPSKTMDQAKFEDEMRALAVCVKCLDETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKLAAAFPASRDSWV 330
VS LKAH F H D+A F + CV C + ASLK CTGC+ + YCS QK W+ HK FCK+ ++ AA RD+ +
Sbjct: 9 VSELKAHDDKTIFRAHN-----DKANFSRNTKR--ACVSCGSQDSEDASLKVCTGCKRMWYCSGACQKSDWKRHKPFCKSHQETQAAM--ERDTQI 95
BLAST of mRNA_E-fasciculatus_F_contig119.1489.1 vs. uniprot
Match: A0A550C734_9AGAR (MYND-type domain-containing protein n=1 Tax=Auriculariopsis ampla TaxID=97359 RepID=A0A550C734_9AGAR) HSP 1 Score: 60.1 bits (144), Expect = 4.790e-6 Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 1
Query: 151 CVKCLDETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKLAAAFPASRDS 324
C KC + ASLK CT CR V YCS + QK W+ HKAFCKA + L + PA+ D+
Sbjct: 21 CFKCHKSVEESASLKTCTSCRRVRYCSVQCQKDDWKAHKAFCKALR-LVESDPATYDT 77
BLAST of mRNA_E-fasciculatus_F_contig119.1489.1 vs. uniprot
Match: A0A1Y2I2I6_9FUNG (MYND-type domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2I2I6_9FUNG) HSP 1 Score: 57.8 bits (138), Expect = 1.120e-5 Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 1
Query: 166 DETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKL 294
D P SL+ C+GCRMV YCSPEHQK W HK CK ++L
Sbjct: 60 DCNAPARSLRTCSGCRMVRYCSPEHQKADWNAHKLDCKCFRRL 102
BLAST of mRNA_E-fasciculatus_F_contig119.1489.1 vs. uniprot
Match: A0A1Y2I0W6_9FUNG (MYND-type domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2I0W6_9FUNG) HSP 1 Score: 57.4 bits (137), Expect = 1.280e-5 Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 1
Query: 166 DETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKL 294
D T P +L+ CTGC MV YCSPEHQK W HK CK +L
Sbjct: 33 DCTAPARTLRTCTGCEMVRYCSPEHQKADWNAHKRDCKTFSRL 75
BLAST of mRNA_E-fasciculatus_F_contig119.1489.1 vs. uniprot
Match: A0A165X5K5_9AGAM (MYND-type domain-containing protein n=1 Tax=Peniophora sp. CONT TaxID=1314672 RepID=A0A165X5K5_9AGAM) HSP 1 Score: 56.2 bits (134), Expect = 1.680e-5 Identity = 21/51 (41.18%), Postives = 30/51 (58.82%), Query Frame = 1
Query: 142 LAVCVKCLDETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKL 294
+ C C + + + K C GC++ YCS QKGHW++HKAFCK K +
Sbjct: 145 MGACAGCEKDDTSKHTTKVCAGCQLTRYCSAACQKGHWREHKAFCKMEKTV 195
BLAST of mRNA_E-fasciculatus_F_contig119.1489.1 vs. uniprot
Match: A0A0C2YHI0_HEBCY (MYND-type domain-containing protein n=1 Tax=Hebeloma cylindrosporum h7 TaxID=686832 RepID=A0A0C2YHI0_HEBCY) HSP 1 Score: 58.2 bits (139), Expect = 1.980e-5 Identity = 27/50 (54.00%), Postives = 30/50 (60.00%), Query Frame = 1
Query: 130 EMRALAVCVKCLDETKPRASLKWCTGCRMVLYCSPEHQKGHWQ-DHKAFC 276
+ R AVC C P LK C+GCRMVLYCS EHQK HW+ HK C
Sbjct: 402 DSRKEAVCASCGKPAGPDVELKTCSGCRMVLYCSAEHQKVHWKASHKKQC 451
BLAST of mRNA_E-fasciculatus_F_contig119.1489.1 vs. uniprot
Match: A0A0C9VB65_9AGAM (MYND-type domain-containing protein n=1 Tax=Hydnomerulius pinastri MD-312 TaxID=994086 RepID=A0A0C9VB65_9AGAM) HSP 1 Score: 57.8 bits (138), Expect = 2.250e-5 Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 130 EMRALAVCVKCLDETKPRAS-LKWCTGCRMVLYCSPEHQKGHWQD-HKAFCKARKKL 294
+ R+ AVC C KP LK C+GCRM+LYCS EHQK HW+D HK+ C +RK L
Sbjct: 342 DKRSQAVCAAC---GKPGGQELKTCSGCRMILYCSAEHQKAHWKDVHKSQC-SRKYL 394
BLAST of mRNA_E-fasciculatus_F_contig119.1489.1 vs. uniprot
Match: A0A2J7PP89_9NEOP (MYND-type domain-containing protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PP89_9NEOP) HSP 1 Score: 58.5 bits (140), Expect = 2.370e-5 Identity = 28/73 (38.36%), Postives = 41/73 (56.16%), Query Frame = 1
Query: 91 QPSKTMDQAKFEDEM--RALA---VCVKCLDETKPRASLKWCTGCRMVLYCSPEHQKGHWQDHKAFCKARKKL 294
+P T+D+A+ E ++ R + VC C + SLK C+ C+M+ YCS EHQ+ HW HK CK K+
Sbjct: 900 KPVSTVDEAELEYQLVQRHIFLSYVCHVCKSLESSKCSLKKCSNCKMISYCSKEHQRQHWSAHKDLCKVISKI 972 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig119.1489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig119.1489.1 >prot_E-fasciculatus_F_contig119.1489.1 ID=prot_E-fasciculatus_F_contig119.1489.1|Name=mRNA_E-fasciculatus_F_contig119.1489.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=469bp RDIPTRLVGFQVRRLVSALKAHCRALSFVHQPSKTMDQAKFEDEMRALAVback to top mRNA from alignment at E-fasciculatus_F_contig119:31422..37753+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig119.1489.1 ID=mRNA_E-fasciculatus_F_contig119.1489.1|Name=mRNA_E-fasciculatus_F_contig119.1489.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6332bp|location=Sequence derived from alignment at E-fasciculatus_F_contig119:31422..37753+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig119:31422..37753+ >mRNA_E-fasciculatus_F_contig119.1489.1 ID=mRNA_E-fasciculatus_F_contig119.1489.1|Name=mRNA_E-fasciculatus_F_contig119.1489.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2814bp|location=Sequence derived from alignment at E-fasciculatus_F_contig119:31422..37753+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |