prot_E-fasciculatus_F_contig11893.1479.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11893.1479.1
Unique Nameprot_E-fasciculatus_F_contig11893.1479.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length248
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11893.1479.1 vs. uniprot
Match: A0A6H5KUE2_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE2_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 2.060e-53
Identity = 130/188 (69.15%), Postives = 138/188 (73.40%), Query Frame = 0 
Query:   50 GLGIPRAPHPRSRSPSAFASLRAAQTGLCDAIRAAPKPAAGTSGXXXXXXXXXXDDDSVDMFAREGWSSSSLTSSGRDGVGESRGGTGGGIGGSVAPGVNRRALGPLGETTNSSXXXXXXIGYRGRGIPETKAERRQRVAKEKENSSATAGGGDRCADHDEMTSRNRSRKLNNDVCLGPGGKVDYLNT 237
            GLGIPR P    RSPSAFASLRAA TGLC A R+ P PA G             D  SVD+FAREGWSS   TSSG+ GVGE      GG GGSVAPGVNRRALGPLGETTNSSXXXX  IG R RGI ET AERR+RVAKEKEN SA +GGGDR AD DE TSRNRS KL+N+VCLGP GKVDYL+T
Sbjct: 1028 GLGIPRVP----RSPSAFASLRAAGTGLCAANRSGPNPAGGGG------EKRPTDGVSVDLFAREGWSS---TSSGQAGVGE------GGGGGSVAPGVNRRALGPLGETTNSSXXXXG-IGDRRRGIRETVAERRERVAKEKENCSAASGGGDRWADQDETTSRNRSHKLHNNVCLGPDGKVDYLDT 1195
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BLAST of mRNA_E-fasciculatus_F_contig11893.1479.1 vs. uniprot
Match: D7G2P5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P5_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.320e-45
Identity = 134/191 (70.16%), Postives = 138/191 (72.25%), Query Frame = 0 
Query:   50 GLGI-PRAPHPRSRSPSAFASLRAAQTGLCDAIRAAPKPAAGTSGXXXXXXXXXXDDD-SVDMFAREGWSS-SSLTSSGRDGVGESRGGTGGGIGGSVAPGVNRRALGPLGETTNSSXXXXXXIGYRGRGIPETKAERRQRVAKEKENSSATAGGGDRCADHDEMTSRNRSRKLNNDVCLGPGGKVDYLNT 237
            GLGI PRAP    RSPSAFASLRAA TGLC AIRAAPK A     XXXXXXXX   DD SVD+FAREGWSS SSLTSSGRDGVGE      GG GGS APGVNRRALGPLGETTNSSXXXXX IG R RGI ET AERR                 DR AD DE TSRNRS KL+N+VCLGP GKVDYL+T
Sbjct:  929 GLGILPRAP----RSPSAFASLRAAGTGLCAAIRAAPKSAXXXXXXXXXXXXXRASDDVSVDLFAREGWSSTSSLTSSGRDGVGE------GGGGGSAAPGVNRRALGPLGETTNSSXXXXX-IGDRRRGIRETVAERRXXXXXXXXXXXXXXXXXDRWADQDETTSRNRSHKLHNNVCLGPDGKVDYLDT 1108
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11893.1479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUE2_9PHAE2.060e-5369.15USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2P5_ECTSI2.320e-4570.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11893contigE-fasciculatus_F_contig11893:825..1998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11893.1479.1mRNA_E-fasciculatus_F_contig11893.1479.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11893 825..3551 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11893.1479.1 ID=prot_E-fasciculatus_F_contig11893.1479.1|Name=mRNA_E-fasciculatus_F_contig11893.1479.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=248bp
RRPVLRRRVVRQAGVAGVGPAGAGPRAVLLGVHGQRPRRGPRQGGGLPWG
LGIPRAPHPRSRSPSAFASLRAAQTGLCDAIRAAPKPAAGTSGGGAGGQK
RASDDDSVDMFAREGWSSSSLTSSGRDGVGESRGGTGGGIGGSVAPGVNR
RALGPLGETTNSSSSGGGGIGYRGRGIPETKAERRQRVAKEKENSSATAG
GGDRCADHDEMTSRNRSRKLNNDVCLGPGGKVDYLNTQQEQRREWSL*
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