mRNA_E-fasciculatus_F_contig1189.1478.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1189.1478.1
Unique NamemRNA_E-fasciculatus_F_contig1189.1478.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1189.1478.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 3.110e-110
Identity = 224/482 (46.47%), Postives = 290/482 (60.17%), Query Frame = 1 
Query:  130 AEEYVPDAGVGKVHPICDSGSGGICRSEEELVASLERDEHIAVTSSIEVGELLCESLVEAPESTLLRFAITSNETVVATRTSFSVVDGDVFTDSIDRKVWIGDVVDPAPPADSVPSTISMTWTTPCDVETFLLKMTS----GSTQVR-SVPCAAGSSSDICMVELEVDFSEEDDPVEVEAEDPSSQSKTEGGVSMASDVGALPELPSATMREVKGPSHNRGGHELDKKGDAAVTPSRSGRGLQSSTQVAVMVLYNPEAMNSLGGLESQQMETTIAEAFVQTNQAMQNSDIP-LEIVLVHVAQLPYSQ------EGAAIAAIDVLTGLANSEEVESLRDAHSADLVQLISDFTGSCGAGFVFNGFPNSGFSVARATCIENFTHTHEIGHNLGCRHDRGNDAESQTEYAHGLRYCTGINSYRTIMGL-----------DTDCNVPRVNYFSNPDVYYLGLPTGTSTENNARQITENMLTVANFR 1506
            AEE V D GVG +H I +       + EE LV  LE DE  AV   IE+G+LLC+SL +A +S+LLRF I+S ETV+A RTS+S +DG+V  D   RK W+G+VVDP P  +S+P T+SMTWT PCD+ETFLLK+ S    GST +  SVPC+AGSSS+ICMVEL+  F +E D V+       SQS +    S       L E   +T    +G   ++G                S R LQ +T + V++ Y+PEA +S  G+   Q+ T I E  V  NQA+ NS I  LE  LVHVA+LPYSQ      +   I     L  LA +  V  LR+ +  DLVQL+  F G+CG G++FNG    GFS+  + C +NF+HTHEI HN+GC HDR N +E+Q EY HG RYCTG + YRTIM             + D  VP+VNYFSNP+V YL  PTGT+T +NAR I E+M+ V+NFR
Sbjct:  129 AEEDVKDTGVGHLHAIPEDEH----QVEEGLVEVLETDELTAVMGDIELGDLLCDSLEDATDSSLLRFTISSTETVIAERTSYSSIDGNVLPDGNARKTWLGEVVDPEPSTNSIPRTVSMTWTDPCDIETFLLKLVSRNSDGSTSIATSVPCSAGSSSEICMVELQKFFYDESDAVDT------SQSSSSSSTSKYQGSRMLKERRVSTTFMEEGSRWSQG--------------IPSDRSLQGTTVIDVLIFYSPEAASS-EGISDAQLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPIDSDDIDLEPELDALAANSAVNDLRNEYQGDLVQLVGYFPGTCGLGYIFNGNAEFGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDN-SETQDEYRHGYRYCTGSDPYRTIMSYYQNGCGGDPTPEADPIVPQVNYFSNPEVTYLNKPTGTATADNARCIEESMVAVSNFR 584
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1189.1478.1 vs. uniprot
Match: D7G3T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T0_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 1.200e-94
Identity = 162/191 (84.82%), Postives = 171/191 (89.53%), Query Frame = 1 
Query:  595 CMVELEVDFSEEDDPVEVEAEDPSSQSKTEGGVSMASDVGALPELPSATMREVKGPSHNRGGHELDKKGDAAVTPSRSGRGLQSSTQVAVMVLYNPEAMNSLGGLESQQMETTIAEAFVQTNQAMQNSDIPLEIVLVHVAQLPYSQEGAAIAAIDVLTGLANSEEVESLRDAHSADLVQLISDFTGSCGAG 1167
            C VELEVDFSEEDDPVEVEAE+PSSQS+TE  VSMA+ VG  PEL SATMREVKGPSHNRGGHEL+  G AAVTP RS RGLQSSTQVA+MVLY+PEAM+SLGGLESQQMETTIAEAFVQTNQAM NSDIPLEIVLVHVAQLPYSQE AA+   D+LTGL  SEEVESLRDAHSADLVQLI DFTGSCGAG
Sbjct:    7 CNVELEVDFSEEDDPVEVEAEEPSSQSETESAVSMANAVGTPPELLSATMREVKGPSHNRGGHELE--GYAAVTPRRSSRGLQSSTQVAMMVLYSPEAMSSLGGLESQQMETTIAEAFVQTNQAMHNSDIPLEIVLVHVAQLPYSQESAAL---DILTGLTRSEEVESLRDAHSADLVQLIGDFTGSCGAG 192
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1189.1478.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 1.110e-79
Identity = 178/424 (41.98%), Postives = 244/424 (57.55%), Query Frame = 1 
Query:  343 SNETVVATRTSFSVVDGDVFTDSIDRK-------------VWIGDVVDPAPPADSVPSTISMTWTTPCDVETFLLKMTS----GSTQV-RSVPCAAGSSSDICMVELEVDFSEEDDPVEVEAEDPSSQSKTEGGVSMASDVGALPELPSATMREVKGPSHNRGGHELDKKGDAAVTPSRSGRGLQSSTQVAVMVLYNPEAMNSLGGLESQQMETTIAEAFVQTNQAMQNSDIP-LEIVLVHVAQLPYSQEGAAIAAIDV-----LTGLANSEEVESLRDAHSADLVQLISDFTGSCGAGFVFNGFPNSGFSVARATCIENFTHTHEIGHNLGCRHDRGNDAESQTEYAHGLRYCTGINSYRTIMGL-----------DTDCNVPRVNYFSNPDVYYLGLPTGTSTENNARQITENMLTVANFRE 1509
            +++TV+A RTS+S +DG V +D I RK              W+G+VVDP P A+S+P T+SMTWT PCD E+FLLK+ S    GST +  SVPC+AGSS++ICMVELE+ F +E              S+TE             +  S  ++E       R      ++G        S R LQ +T + V+++Y+PEA  + G  E+Q + T I E  V  NQA+ NS I  LE  LV VA+LPYSQ  A I + D+     L  LA +  V  LR+ +  DLVQL+  F G+CG G++FNG    GFS+  + C +NF+HTHEI HN+GC HD+ N++++Q  Y HG RYC G + YRTIM             + D  VPRVNYFSNP+V YL   TGT+  +NAR I ++M+ V+ FR+
Sbjct:    5 TSQTVIAERTSYSSIDGSVLSDGITRKDELTGDGSHGLFQTWLGEVVDPEPSANSIPRTVSMTWTDPCDTESFLLKLVSRNADGSTSIFTSVPCSAGSSNEICMVELEMFFHDE--------------SETEDTXXXXXXXXXXKDQGSRMLKE------RRVSTTYTEEGSLRSQGMSSDRRLQGTTVIDVLIVYSPEAAYARGIAEAQLL-TRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYSQM-AYIPSDDIDLKPELDALAANSNVTDLRNQYQGDLVQLVGYFPGTCGLGYIFNGDAAFGFSLVDSNCFDNFSHTHEIAHNMGCYHDK-NNSDTQHAYRHGWRYCEGADPYRTIMSYYHNGCGGDPTSEDDPIVPRVNYFSNPNVTYLNKSTGTAAADNARCIEDSMVAVSEFRD 405
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1189.1478.1 vs. uniprot
Match: D8LLU0_ECTSI (PKD domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU0_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 5.480e-78
Identity = 174/427 (40.75%), Postives = 227/427 (53.16%), Query Frame = 1 
Query:   91 GITLLLRTLVRTSAEEYVPDAGVGKVHPICDSGSGGICRSEEELVASLERDEHIAVTSSIEVGELLCESLVEAPESTLLRFAITSNETVVATRTSFSVVDGDVFTDSIDRKVWIGDVVDPAPPADSVPSTISMTWTTPCDVETFLLKMTS----GSTQ-VRSVPCAAGSSSDICMVELEVDFSEED---DPVEVEAEDPSSQSKT--EGGVSMASDVGALPELPSATMREVKGPSHNRGGHELDKKGDAAVTPSRSGRGLQSSTQVAVMVLYNPEAMNSLGGLESQQMETTIAEAFVQTNQAMQNSDIPLEIVLVHVAQLPYSQEGAAIAAIDVLTGLANSEEVESLRDAHSADLVQLISDFTGSCGAGFVFNGFPNSGFSVARATCIENFTHTHEIGHNLGCRHDRGNDAESQTEYAHGLRYCTGI 1341
            GI    R++    AEE V D GVG+VHPI           E+ELVA+LE D    V   I +GELLC+SL +A +STLLRF I+S ETV+A RTS+S +DG++F D   RK W+G+VVDP PPA S P T+SMTWT PC VE+FLL + S    GST  VRS+PCAAGSSS++CMVEL V F++ D   D +  + +D   +S T    G S+    G +       ++ ++ P+ + G   L  +G      S   R LQ+                                          N+ +P + +L       Y  E      +D +TG A    V +LRD H ADLV L+  F  +CG G++FN     GFS+  + C  N+T THEIGHNLGCRHDR N     T Y HGLRYCTGI
Sbjct:   28 GIPSATRSVWTRFAEEDVSDVGVGEVHPIASDEE----EIEQELVAALESDPQATVVVHIGLGELLCDSLEDASDSTLLRFNISSTETVIAERTSYSSIDGNIFPDGETRKTWMGEVVDPEPPAGSAPRTVSMTWTNPCGVESFLLTVVSHNNDGSTSIVRSIPCAAGSSSEVCMVELAVVFNDGDSAVDSISADNDDDDFESMTLENPGESVEGQEGRM-------LKTIRAPTKSVGKESLHSRG------SPGSRELQAG-----------------------------------------NTQLPYDQMLDDTTD--YGPE------LDAMTGNA---AVAALRDEHEADLVLLVGYFPNTCGRGWIFNFNEALGFSLMDSICFSNWTQTHEIGHNLGCRHDRDNSNTGMTAYGHGLRYCTGI 385
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1189.1478.1 vs. uniprot
Match: D8LCP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP8_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 6.280e-38
Identity = 109/323 (33.75%), Postives = 165/323 (51.08%), Query Frame = 1 
Query:  211 EEELVASLERDEHIAVTSSIEVGELLCESLVEAPESTLLRFAITSNETVVATRTSFSVVDGDVFTDSIDRKVWIGDVVDPAPPA-DSVPSTISMTWTTPCDVETFLLKMTS----GSTQ-VRSVPCAAGSSSDICMVELEVDFSEEDDPVEVEAEDPSSQSKTEGGVSMASDVGALPELPSATMREVKGPSHNRGGHELDKKGDAAVTPSRSGRGLQSSTQVAVMVLYNPEAMNSLGGLESQQMETTIAEAFVQTNQAMQNSDIPLEIVLVHVAQLPYSQEGAAIAAIDVLTGLANSEEVESLRDAHSADLVQLISDFTGSCG 1161
            E+EL  +LE DE + V   +++GELLC+SLV+A ++ LL+FA+++NET++A RTS++VV G+ FT  + R++W G V+DP P A ++ P  +SMTW   CDVETF LK++     G+T  V+SVPC   S  ++C+VE+  DF    +P+ V            G  S          L    +       H                                MVLY   ++  L G+   QMET ++ A    N   +NS+I +E   V+  +LPY Q+ A  ++   L+ L   E V +LRD + AD+V L+   T +CG
Sbjct:  147 EKELAETLEVDEQVTVLGEVQLGELLCDSLVQAEDAPLLQFALSANETIIANRTSYTVVSGETFTGGVGRRIWNGVVIDPEPDAGEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSAVKSVPCGL-SGVEVCLVEVAFDFLPGKEPLRV------------GVNSTGQSTAVRRRLGDGILGGGSRDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVLYTNMSL-VLMGVSDVQMETMVSAAISTVNVGFENSNIGIETTTVYKGRLPYYQDCADDSSTK-LSALREDEGVNALRDEYGADIVLLVDYLTDACG 454
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1189.1478.1 vs. uniprot
Match: D8LMP2_ECTSI (Peptidyl-Asp metallopeptidase. metallo peptidase. MEROPS family M72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP2_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 2.150e-35
Identity = 79/169 (46.75%), Postives = 102/169 (60.36%), Query Frame = 1 
Query:  853 QVAVMVLYNPEAMNSLGGLESQQMETTIAEAFVQTNQAMQNSDIP-LEIVLVHVAQLPYSQ----EGAAIAAIDVLTGLANSEEVESLRDAHSADLVQLISDFTGSCGAGFVFNGFPNSGFSVARATCIENFTHTHEIGHNLGCRHDRGNDAESQTEYAHGLRYCTGIN 1344
            ++ V++ Y+PEA +S  G+   Q+ T I E  V  NQA+ NS I  LE  LVHVA+LPYSQ        I     L  LA   +V+ LRD +  DLVQL+  F G+CG G+VFNG    GFS+  + C +NF+HTHEI HN+GC HDR N    Q  + HG RYCTG +
Sbjct:   12 KIDVLIFYSPEAASS-EGISDAQLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPNDDIDLGPELDALAADSDVDDLRDQYQGDLVQLVGYFPGTCGLGYVFNGNAEYGFSLVGSNCFDNFSHTHEIAHNMGCYHDRLNSGP-QDAFRHGYRYCTGTD 178
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1189.1478.1 vs. uniprot
Match: D7FTV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV1_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 3.620e-34
Identity = 114/312 (36.54%), Postives = 160/312 (51.28%), Query Frame = 1 
Query:  268 IEVGELLCESLVEAPESTLLRFAITSNETVVATRTSFSVVDGDVFTDSIDRKVWIGDVVDPAPPADSVPSTISMTWTTPCDVETFLLKMTS----GSTQ-VRSVPCAAGSSSDICMVELEVDFSEEDDPVEV-EAEDPSSQSKTEGGVSMASDVGALPELPSATMREVKGPSHNRGGHELDKKGDAAVTPSRSGRGLQSSTQVAVMVLYNPEAMNSLGGLESQQMETTIAEAFVQTNQAMQNSDIP-LEIVLVHVAQLPYSQEGAAIAAIDV-----LTGLANSEEVESLRDAHSADLVQLISDFTGSCGAG 1167
            IE+GELLC+SL +A +S+LLRF I+S ETV+A RTS+S +DG V +D I R                                +FLLK+ S    GST  V SVPC+AGSSS++CMVELE+ F +E + V+  ++       K +G   +     ++      ++R    PS                      R LQ++T + V+++Y+PEA  + G  E+Q + T I E  V  NQA+ NS I  LE  LV VA+LPYSQ    + + D+     L  LA +  V  LRD +  DLVQL+  F G+CG G
Sbjct:   13 IELGELLCDSLEDAADSSLLRFTISSTETVIAERTSYSSIDGSVLSDGITRM-------------------------------SFLLKLVSRNADGSTSIVTSVPCSAGSSSELCMVELEMFFHDESEAVDTTQSXXXXXXXKDQGSRMLKEQRVSMTYTEEESLRSQGLPSD---------------------RSLQATTVIDVLIVYSPEAAYARGIAEAQLL-TRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYSQM-TYVPSDDIDLKPELDALAANSNVTDLRDQYQGDLVQLVGYFPGTCGLG 270
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1189.1478.1 vs. uniprot
Match: D8LCC0_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC0_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 5.620e-30
Identity = 106/296 (35.81%), Postives = 136/296 (45.95%), Query Frame = 1 
Query:  652 AEDPSSQSKTEGGVSMASDVGALPE--LPSATMREVKGPSHNRGGHELDKKGDAAVTPSRSGRGLQSSTQVAVMVLYNPEAMNSLGG----LESQQMETTIAEAFVQTNQAMQNSDIPLEIVLVHVAQLPYSQEGAAIAAIDVLTGLANSEEVESLRDAHSADLVQLISDFTGSCGAGFVFNGFPNSGFSVARATCIENFTHTHEIGHNLGCRHDRGNDAESQTEYAHGLRYCTGINSYRTIMGLDTDC-NVPRVNYFSNPDVYYLGLPTGTSTENNARQITENMLTVANFRETEE 1518
            A DP   +K E       DV  L E  + SA  +EV    H RG   L     +A     SGR L ++T++ VMVLY P AM S G     L +QQMET I  A+   N A+ +S I   I +VHVA+  Y       A                                         F GF   G+S+    C++N +H HEIGHN+G  H+R  D  S+ +YAH  RYCTG   YRTIM  +T C   PRV  FS  D  Y     GT++ +NAR I E++ TV NFR+  E
Sbjct:  186 ARDPDIDAKDE-------DVRLLNEYLVASAPEQEV---FHERGVRRLS----SAEVQMPSGRVLTATTEIDVMVLYTPAAMISSGTAGTLLTNQQMETEIITAYATANDALADSGISATINVVHVAEARYVMATPRAA-----------------------------------------FEGF---GYSIVHTHCLDNLSHIHEIGHNMGANHNR-EDTSSEHDYAHAQRYCTGDTPYRTIMAYETGCLQAPRVAMFSTQDKTYASKSLGTTSTDNARVIEESLSTVVNFRDRTE 422
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1189.1478.1 vs. uniprot
Match: UPI00135B5B8B (M12 family metallo-peptidase n=1 Tax=Methylicorpusculum oleiharenae TaxID=1338687 RepID=UPI00135B5B8B)

HSP 1 Score: 134 bits (336), Expect = 1.480e-29
Identity = 88/256 (34.38%), Postives = 138/256 (53.91%), Query Frame = 1 
Query:  778 GHELDKKGDAAVTPSRSGRGLQSSTQVAVMVLYNPEAMNSLGGLESQQMETTIAEAFVQTNQAMQNSDIPLEIVLVHVAQLPYSQEGAAIAAIDVLTGLANS--EEVESLRDAHSADLVQLISDFTGSCGAGFVFNG----FPNSGFSV----ARATCIENFTHTHEIGHNLGCRHDRGNDAESQT-EYAHGLRYCTGINSYRTIMGLDTDCNVPRVNYFSNPDVYYLGLPTGTSTENNARQITENMLTVANFRET 1512
            G E+D  G +   P  +   + + T + VMV+Y P++  +  G     +E  I  A  + NQ+  NS I ++I LVH+A++ Y + G+   ++  +TG ++   + V +LR+ + AD V LI+  T +CG G++ +     F +  FSV    ++  C+ N T  HE+GHN G  HDR +   +   +Y++G R C     +RT+M  D      RV YFSNP V + G  TGT+TE+NAR +T     VA FR T
Sbjct:  210 GGEIDTTGSSE--PVVANAEINAGTVIDVMVVYTPQSRINAYGQSG--IEAKIVNAVAKANQSYINSQIDMQINLVHMAEVSYVESGSTSTSLSDITGTSDGKMDAVHTLRNQYGADQVVLITTDTSACGTGYLMSSPSTSFASYAFSVVHDDSKYACLSNHTLAHELGHNQGSHHDRASATSTPAYDYSYGYRLCQ-TGGFRTVMSYDCSGGT-RVGYFSNPKVTFNGEYTGTATEDNARSMTNTKAIVAAFRGT 459
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1189.1478.1 vs. uniprot
Match: A0A3M8FRP0_9BACT (Ig-like domain-containing protein n=1 Tax=Phycisphaera sp. TaxID=2030824 RepID=A0A3M8FRP0_9BACT)

HSP 1 Score: 129 bits (324), Expect = 4.540e-28
Identity = 85/231 (36.80%), Postives = 128/231 (55.41%), Query Frame = 1 
Query:  838 LQSSTQVAVMVLYNPEAMNSLGGLESQQMETTIAEAFVQTNQAMQNSDI-PLEIVLVHVAQLPYSQEGAAIAAIDVLTGLANS--EEVESLRDAHSADLVQLISDFTGSCGAGFVFNGFPNSGFSVARATC-IENFTHTHEIGHNLGCRHDRGNDAESQTEYAHGLRYC-TGINSYRTIMGLDTDCNVPRVNYFSNPDVYYLGLPTGTS-TENNARQITENMLTVANFRET 1512
            L   + + VM++Y  EA    GG  + Q+      +   TN+A  NS I PLE+ LVH  ++ Y++ G+A   I  L G ++   + V +LRD ++ADLV L+ +   +CG G++     + GF+V    C + N +  HEIGHN+GC HDR N   S   YA+G R+  T    YR+IM      +  RV +FSNP V Y+G  TG + +E+N R   E   +V+NFR++
Sbjct:  253 LDDGSVIDVMIVYTAEARQGWGG--TNQILALAQNSIDVTNEAYDNSQISPLELNLVHTEEVNYNESGSASTDITRLQGTSDGFMDNVHALRDTYAADLVALLVNDFNACGVGYLAPFNESLGFTVTDTGCAVGNLSFPHEIGHNMGCAHDRDNAGGSTFSYAYGHRWTSTNGGRYRSIMAYSQGGDT-RVRHFSNPGVNYIGTATGVNNSEDNGRCHEETKFSVSNFRDS 480
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1189.1478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF50_9PHAE3.110e-11046.47LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
D7G3T0_ECTSI1.200e-9484.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRC1_9PHAE1.110e-7941.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLU0_ECTSI5.480e-7840.75PKD domain protein n=1 Tax=Ectocarpus siliculosus ... [more]
D8LCP8_ECTSI6.280e-3833.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMP2_ECTSI2.150e-3546.75Peptidyl-Asp metallopeptidase. metallo peptidase. ... [more]
D7FTV1_ECTSI3.620e-3436.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCC0_ECTSI5.620e-3035.81Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarp... [more]
UPI00135B5B8B1.480e-2934.38M12 family metallo-peptidase n=1 Tax=Methylicorpus... [more]
A0A3M8FRP0_9BACT4.540e-2836.80Ig-like domain-containing protein n=1 Tax=Phycisph... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1189contigE-fasciculatus_F_contig1189:490..7601 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score168.7
Seed ortholog evalue7.2e-39
Seed eggNOG ortholog2880.D8LC56
EggNOG free text desc.Metallo-peptidase family M12B Reprolysin-like
EggNOG OGs2E79G@1,2SDWE@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons14
Model size1568
Cds size1566
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1189.1478.1prot_E-fasciculatus_F_contig1189.1478.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1189 490..7600 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927699.3793395-CDS-E-fasciculatus_F_contig1189:489..7451622927699.3793395-CDS-E-fasciculatus_F_contig1189:489..745Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 490..745 +
1695995655.1263633-CDS-E-fasciculatus_F_contig1189:489..7451695995655.1263633-CDS-E-fasciculatus_F_contig1189:489..745Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 490..745 +
1622927699.3962646-CDS-E-fasciculatus_F_contig1189:1406..15011622927699.3962646-CDS-E-fasciculatus_F_contig1189:1406..1501Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 1407..1501 +
1695995655.1919825-CDS-E-fasciculatus_F_contig1189:1406..15011695995655.1919825-CDS-E-fasciculatus_F_contig1189:1406..1501Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 1407..1501 +
1622927699.4136062-CDS-E-fasciculatus_F_contig1189:1798..18701622927699.4136062-CDS-E-fasciculatus_F_contig1189:1798..1870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 1799..1870 +
1695995655.203023-CDS-E-fasciculatus_F_contig1189:1798..18701695995655.203023-CDS-E-fasciculatus_F_contig1189:1798..1870Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 1799..1870 +
1622927699.429556-CDS-E-fasciculatus_F_contig1189:2159..22521622927699.429556-CDS-E-fasciculatus_F_contig1189:2159..2252Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 2160..2252 +
1695995655.2132177-CDS-E-fasciculatus_F_contig1189:2159..22521695995655.2132177-CDS-E-fasciculatus_F_contig1189:2159..2252Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 2160..2252 +
1622927699.448287-CDS-E-fasciculatus_F_contig1189:2578..26681622927699.448287-CDS-E-fasciculatus_F_contig1189:2578..2668Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 2579..2668 +
1695995655.223327-CDS-E-fasciculatus_F_contig1189:2578..26681695995655.223327-CDS-E-fasciculatus_F_contig1189:2578..2668Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 2579..2668 +
1622927699.4689581-CDS-E-fasciculatus_F_contig1189:2972..30891622927699.4689581-CDS-E-fasciculatus_F_contig1189:2972..3089Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 2973..3089 +
1695995655.2330363-CDS-E-fasciculatus_F_contig1189:2972..30891695995655.2330363-CDS-E-fasciculatus_F_contig1189:2972..3089Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 2973..3089 +
1622927699.483798-CDS-E-fasciculatus_F_contig1189:3485..36171622927699.483798-CDS-E-fasciculatus_F_contig1189:3485..3617Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 3486..3617 +
1695995655.2420585-CDS-E-fasciculatus_F_contig1189:3485..36171695995655.2420585-CDS-E-fasciculatus_F_contig1189:3485..3617Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 3486..3617 +
1622927699.5028858-CDS-E-fasciculatus_F_contig1189:4001..41631622927699.5028858-CDS-E-fasciculatus_F_contig1189:4001..4163Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 4002..4163 +
1695995655.24991-CDS-E-fasciculatus_F_contig1189:4001..41631695995655.24991-CDS-E-fasciculatus_F_contig1189:4001..4163Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 4002..4163 +
1622927699.525214-CDS-E-fasciculatus_F_contig1189:4431..45521622927699.525214-CDS-E-fasciculatus_F_contig1189:4431..4552Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 4432..4552 +
1695995655.2583544-CDS-E-fasciculatus_F_contig1189:4431..45521695995655.2583544-CDS-E-fasciculatus_F_contig1189:4431..4552Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 4432..4552 +
1622927699.5388057-CDS-E-fasciculatus_F_contig1189:5263..52911622927699.5388057-CDS-E-fasciculatus_F_contig1189:5263..5291Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 5264..5291 +
1695995655.267357-CDS-E-fasciculatus_F_contig1189:5263..52911695995655.267357-CDS-E-fasciculatus_F_contig1189:5263..5291Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 5264..5291 +
1622927699.5541391-CDS-E-fasciculatus_F_contig1189:5680..57571622927699.5541391-CDS-E-fasciculatus_F_contig1189:5680..5757Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 5681..5757 +
1695995655.2773926-CDS-E-fasciculatus_F_contig1189:5680..57571695995655.2773926-CDS-E-fasciculatus_F_contig1189:5680..5757Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 5681..5757 +
1622927699.5703971-CDS-E-fasciculatus_F_contig1189:6222..63251622927699.5703971-CDS-E-fasciculatus_F_contig1189:6222..6325Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 6223..6325 +
1695995655.2874694-CDS-E-fasciculatus_F_contig1189:6222..63251695995655.2874694-CDS-E-fasciculatus_F_contig1189:6222..6325Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 6223..6325 +
1622927699.5887184-CDS-E-fasciculatus_F_contig1189:7051..71901622927699.5887184-CDS-E-fasciculatus_F_contig1189:7051..7190Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 7052..7190 +
1695995655.2976842-CDS-E-fasciculatus_F_contig1189:7051..71901695995655.2976842-CDS-E-fasciculatus_F_contig1189:7051..7190Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 7052..7190 +
1622927699.6054714-CDS-E-fasciculatus_F_contig1189:7519..76001622927699.6054714-CDS-E-fasciculatus_F_contig1189:7519..7600Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 7520..7600 +
1695995655.3077888-CDS-E-fasciculatus_F_contig1189:7519..76001695995655.3077888-CDS-E-fasciculatus_F_contig1189:7519..7600Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1189 7520..7600 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1189.1478.1

>prot_E-fasciculatus_F_contig1189.1478.1 ID=prot_E-fasciculatus_F_contig1189.1478.1|Name=mRNA_E-fasciculatus_F_contig1189.1478.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=522bp
KRPRATIFKPEGLARHSAMRPTRGFLQGLCGITLLLRTLVRTSAEEYVPD
AGVGKVHPICDSGSGGICRSEEELVASLERDEHIAVTSSIEVGELLCESL
VEAPESTLLRFAITSNETVVATRTSFSVVDGDVFTDSIDRKVWIGDVVDP
APPADSVPSTISMTWTTPCDVETFLLKMTSGSTQVRSVPCAAGSSSDICM
VELEVDFSEEDDPVEVEAEDPSSQSKTEGGVSMASDVGALPELPSATMRE
VKGPSHNRGGHELDKKGDAAVTPSRSGRGLQSSTQVAVMVLYNPEAMNSL
GGLESQQMETTIAEAFVQTNQAMQNSDIPLEIVLVHVAQLPYSQEGAAIA
AIDVLTGLANSEEVESLRDAHSADLVQLISDFTGSCGAGFVFNGFPNSGF
SVARATCIENFTHTHEIGHNLGCRHDRGNDAESQTEYAHGLRYCTGINSY
RTIMGLDTDCNVPRVNYFSNPDVYYLGLPTGTSTENNARQITENMLTVAN
FRETEEEEEEEEEEEEEEPGCV
back to top

mRNA from alignment at E-fasciculatus_F_contig1189:490..7601+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1189.1478.1 ID=mRNA_E-fasciculatus_F_contig1189.1478.1|Name=mRNA_E-fasciculatus_F_contig1189.1478.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7112bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1189:490..7601+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAGCGCCCTCGGGCAACCATTTTCAAGCCGGAGGGTCTCGCGCGGCATTC
GGCGATGAGACCTACCCGAGGCTTCCTTCAAGGTCTATGTGGAATTACCC
TCCTGCTTCGAACGCTTGTGCGAACATCTGCCGAGGAATATGTTCCCGAT
GCCGGTGTCGGAAAGGTGCACCCGATCTGTGACTCCGGTAGCGGGGGTAT
TTGCCGTTCAGAAGAGGAGCTCGTTGCTTCGCTTGAGAGGGACGAGCACA
TCGCTGGTGAGACCCATGCACCGAGCTCTGCATCCAGTAGTTGAACTCGC
CCACTACATTTCACGTACGGAGCTCAATCACGTATCGTGCCAATGTTGAT
CGACAGCGTTTGGTCGTTGACCAAGCAAGACATGACAGCGGGCGACGCTG
CACAAAAAGAAATGCTGCAGTTAGTCAGTTGTGCTGGAGGTGAAGAGCAG
CACGTACTGGCAGCACGAATGCACGAATACAAAGAAAGCTAAACCAGTTA
CTTGCTGCCAACGTGGTGTTGGCTGAGGGTATGTACGTATGTACAGATGC
AGATACTATGCGTGCGCGAATTTTGACCCCATGTATATCGGGACTGCGAT
GGAAGCGATCTAGCAGTCGGTGCTGCACACCGCTCGCTACCGATTTTTTC
TGGCTCGGAGTCAAATGCCAATTTAAAAACTATTCTTCCTGCAGCGAAAT
AATCAGTGCGTTGAGGTGAGGACTCTCTCCAGATGTAGTGGCGTGGATCT
CGATTCAAGTTCTTTGGGAACCCGCATCGAACCGAACGAGTTACAACCGT
ACACGAGACCGTGCCTCTGTCTCTGTCTTTGTCTCTGGCTCAGCCTCTCT
CGCTCTTGACGGCACTGCTACTATAGTCTACTGCTGCTGTGCTGTGCTGC
TGTTGTGTAAAACGAAGTCACGAGCAGTATCGAAGTGGGTGAGCTGCTGT
GCGAAAGCCTGGTCGAGGCACCGGAGTCCACTCTACTGCGGTTTGCCATC
ACCTCAAACGAGGTGAGAAAACAGCACTCACTCGTTGTCATGGACTACAG
CAGTAATTTACGAATTTAGTTGCCACGAAGAAAAGAAAATAGTCCAAAAG
AAAATAGTCTACGTAGTCCAAGAAAGAAGGAGCGCTACAGTACATACACG
ATTGATTGGATGATCTTCACGGTCCCGCATGACCCGATTGAGAGAAAAAA
ATGGCGAGCGGCGTTTGTCTGGAGGCTGTGTCGCTCATATTCCACACCCC
ATATGCATACAACCAACCCCCCGTCCCACACGCCGTGCCCCTGTGAAACG
TTTCGACAGACGGTGGTTGCTACGCGCACTTCTTTTTCCGTTGTCGATGG
AGACGTTTTTACGGACAGCATCGATCGCAAGGTGGGTAAAATGTAAAAAT
GCATGCGCCCGAGGCAGAGAAGTCGAGCGTTCTCTCGTGTTGATAGCTTC
GTTTTTCATCGAAACGTTGACGGTGTCCATGAAGGAATCACGAATTGGCC
CCCCCCAACGTCGAGCTAAGAGCCCTGCATCGTCCCCTGGCGACTCCAGC
CCCCACCGAGTACCAGAGACGCGCCAGTCACAGTTTTGCACTTGAACACG
TGAGCTCCCGCCTCACGACCCGTTCCTGGCCCTTTCGTCCTTTCCGCCGC
AACTGCTGTTGTATGCACAGGTGTGGATTGGAGATGTGGTCGACCCCGCG
CCTCCAGCCGACTCCGTTCCCAGCACTATCAGCATGACCTGGACCACCCC
ATGCGATGTCGAGGTATGCATCCCACATGCACGCTCGATCATGACCTACC
TCCACCTACTCACAAGTCCCATGAGTCCTGCGCATATAGGTCTAATGGCG
CGCACGAGAGTCTCGGCAGAGAAAACGCTGAGCCTACTCACTTGCACGAG
CACTACGCACGTGTGCGGTGAGATCGTGACACCTTCACAGAGACGGGCGC
GGACTGCTCTTCCATGTCGCCATCCACATCTAATACAAGCAAAAGAATAG
GGCACTCGGGATCACATTGGGACCTGATGACAACGATGTGGTTGTGTGTT
GGCCCGAACTATCCGCCCCTGCTGGCTACCACCCCACAGACCTTCTTGCT
CAAGATGACGTCGGGCAGCACACAAGTGAGATCGGTGCCATGTGCGGCGG
GTTCAAGCAGCGACATCTGCATGGTTGAGGTGGGCTTCTGTGAGCTAAAA
ATTTAAGGAACGTTCGTAACGGTTGAAAGCCGGCTCCCGTCCCGCAAGGG
AAATCGCGAAATCGCGACGGCCAGAGCGATCAACTGGGCTACCAGCCATG
CCGAGCTATCCTCCGACCACAGCTTAAAACGGAAAGAGGGTTATCTTGGT
ACCTATTGCCATGACAGGATTGTCTGCTCTGCTCTGACTTCTCACTATTA
AATAACGTCCGGAAGTTCGAGCAATGCTCGAGAAGCCAAGGACCCCCGTC
GCTCCCGGTGTTTCTGCACGCTGCGTTGTCCAGCTCGAGGTGGACTTTAG
CGAGGAAGACGATCCCGTCGAGGTGGAAGCAGAAGACCCTAGCTCGCAAA
GCAAGACGGAGGGCGGTGTCAGCATGGCGAGCGATGTCGGCGCGCTTCCG
GTAATAATATCGAATTTCGTTTTCGAACTTCGCTTCGCACCCATCTAGAG
GCCGCAATAACGTAGCTGTCCTCGCTCGTAGACGGTGCAATACGGGAAAC
GTGACCACTGCTGACAACAAGCGTTTTCCGCGTTGTTGTGATCGTTTGTC
CTCAAGTGGTCACCTTGAAATGCTGGGGCACCCCAAGCTTCCGCGGCATG
ATTCCCATGGAGGGCCCGGTGAAGCTCATTTTCGAGCTTTCGTGCACCAC
CACCACGTCAAGTTTTGGAAGAGCATGAATCGGGCTGTGAGCCCAACCGC
AAGCTATTATTTAGTTGGAATAGCGTGAATTTGGCTGTAGGCTCCGCACG
CTAGTTTCCTGGACCTGCCGAACACGCAACACGAATTCATTGGCAGGAGT
TGCCGTCTGCGACGATGCGCGAGGTGAAAGGACCCTCGCACAACCGAGGA
GGACATGAGCTCGATAAAAAGGGGGATGCTGCTGTAACGCCAAGCCGCAG
CGGCCGCGGGCTACAGTCTTCTACTCAGGTACCTACGTGGGGAGCACGCT
CAGAGCAAAGACAGAGGGGCTTAGTCATCAACACCAGAACATTGGAGGAC
AATTATCAGCACGCACAATGCGAACGTGTTACTTGGAATGTCGATTCATC
GATGTTGGATTACAAACAGCAGATACACTTTTGCGCCTCCAAATAGGGCC
CTTCACATTGCGTTTCCAGTCCCATGTGAGATTGGAAATATTTTGAAACA
ATGCGAAACCCCGGGGAACTGACTCACAGCAAGCAAACCTGCCAAGACTG
GTTCACAGCCTTCGGGCTCAGTCGTGATAAACTCCATGCCCGGCGTGTTT
GCCCGATCCGTTTAATAAACCGTGTGGCATCTCGCACCGCACCTGCTGCC
CCTGTCGAGAAGGTTGCTGTGATGGTCCTCTACAACCCGGAGGCGATGAA
CTCGCTGGGAGGCCTGGAGAGTCAGCAGATGGAGACAACGATCGCCGAAG
CGTTCGTGCAGACGAATCAAGCCATGCAAAACTCGGACATTCCGCTGGAG
ATCGTCCTCGTTCACGTGGCCCAGGTGAGGTGCTACATGGATATCCGTTT
CACGTTCACCGATTAGCTGCGAGATTTTGTCCCCTAGCTGCGTTCCACAT
GTTCTGCGGAGACTCTTGAGTGAAATCTCACTGACGAAATACGTGCTTCG
AAGGCTTGACAGCGGAAAAACCGACGTGAGAGTAAGACATCGTCGGCGTT
GCCTTACTCTACCAACGTGGCCTCGACGCAAAGCCTCCAGCCGACTGGCA
GCATCTGGTGGCGATCGTGCTGCTTCCTTTGCCCCGTCGCAGCTCCCTTA
CTCCCAGGAGGGCGCCGCCATCGCTGCCATAGACGTCCTTACCGGCTTAG
CGAACAGCGAGGAAGTGGAGAGCCTACGAGATGCGCATTCTGCCGATTTG
GTGCAGCTGATAAGTGAGGATGGATCACTTTAGGAAGGGGATGGTGCATA
CTCGTGAGACATGGGGGGGCGCAGCTGGTTCGAAATGACCTTACTCTCTG
AGACGCTCGGTAGAGTAGGAACCAAGCACCTTGGCATCTTTGGGCAGAGA
ACCAAGCAAGCATCCATCGCTTCTCCTGAATGACATGCTTGCTTCGCAGT
CCCGTGGCGTACAGCTATCGGCGAGAGTATAAGGCTGTTTGAACACTTGT
AGTTTTTCTTCTTGGTTCGTTGCGGTTCGCTAAATAGGCTATTCAAACCA
AGAGCACGTCTGAGCTGTTCGAGCTTGGGAAACGTTCCTGATGACAACTG
GCAGTTGATTCACACCACCACACGCTATACTTTCAATTTGCAATACGCCG
TGATGACACTTCTCCGCATGCTCTGATAAGCCCACTCCGGAGGCGCGTCT
GGTATGTATCTGTTATAAAATTGCTGCCAACCCTGTATTCTAAAGCACGG
CACCGGAGGCGCGTCTGGTATGTATCTGTTATAAAATTGCTGCCAACCCT
GTATTCTAAAGCACGGCAGACGGACGGTGCCTGCTTTACGTGTACCATTC
GCTGGCAGCCAATCAGTCACAAGAACCCTGAGCAACGCAGGTGTCCATAC
CACGTCGCTGCTGACATCTAGATATGGCTGGATTCCTAAACTTTCGCCCT
TGCCCTCGCTGCGAAATTTTTCAGGCGATTTTACGGGGTCCTGCGGTGCT
GGGTGAGTCGCGCTTGAAGGCCAAGCCCGAGACAGATAAATTGTCATTCG
AGCAATAAACGTTGTAGCACTTGTTCCCTGCGCCAGCGACTTAAGGGTCC
AAAATGGAATATATTTGATCTCGTTAGAAGCGCTGCCATTGGTTACAAGG
TTGTAGATCTTGTTGTTTTTTTGCGGAAGTTGGCACAAGCATCTACTTTC
GTGGCTGTTGAGCAAGAATGTGGAAGTCCTGCCGCGAAGAGAGAAGGACG
TACCGTACCATGATTCGTCCGCGAGCACCAGTCTGGAAGGGCGGTTCGCA
ACAAATACTGAACAACCCCGAACCCAACCAAAACGTTTACCTCGCCCCCG
TCTTCCCCCTGCCCCCAATCGCAACAAACTGTGGTCCTCAGCTTCGTCTT
CAACGGCTTCCCGAACTCAGGATTTTCCGTGGCCAGGGCAACCTGCATTG
AAAACTTTACCCATACACGTGAGAGGAGGAGGGTGGGGGTTGCAACTCGC
GCACGGATTTCGACCAAACAGTTTTTGTCGACCTAATCGCGCGTGACGCA
GGCCAGCACATACGAAAGCGGTTCGCAGAACTGTAGCTAGCTCTTCAAAG
GGGAAAGGTGGGCAGTGATGTAGCTCCACCTTCCCAGCAGAACCGTTTGG
AAATCCCCACCTCGTAGGCGACATAAGATGCCACACCCCCCTGGATGGAT
TTCAAAGCTCGAGTACTCCACGACGACGAGAATGCTAACCTAAACCATGC
CGCCGTTTTTCGGCACGGCCGCTATTTTCTACGGAGTGTTCGGGCTTTGA
AAACACTTCCGGGGGCTGTGGTATCTTACATATCCTACGGTACGCACCCC
GTGCTTTCGTACCGAAACAAGTGTTGGGTTGGCTCTAACCCTTCCGCACT
ATGCATATCTCCCCCCAACACTATTGCTCTCAGATGAGATCGGACATAAC
TTAGGGTGCAGGCACGACAGAGGAAACGATGCCGAGAGCCAAACGGAGTA
CGCTCATGGCTTGCGGTACTGTACGGGCATCAACAGGTACGCGCAATTTT
CCCTCTCCCTGCCCATAGATGTACCATGCGTTTGTGTTCCCTCTGAACCG
TCTAGTTTACCGTCATCGCGCGTTAATTGTATGAATATCCTTGTGAAACA
CATGGATTTCTGCTTGTCAGAGAAGCTTAACGGTCCTTCCCACGCCAATG
AGGACAACTGACTTCGCGGCGTTTGGGGATGGATTCGAGCTATACGTTGG
CGGCAGGTGGTGTGTGTGTGTGTGTGAGACAGAGAGAGCCTGAGCCAATT
GTCGAGCGGGTCTGTTCTTGCTTGTGGTTTCGCCCTGTCGGCGCTCTGAT
TCCGGTACATGTAGATACATCGGAAGGGGGTTGTGCAGCATATCCACTAT
GCTACAAACCAGCGTGTTAGATGTACAATGTATCCAATGTGCAACCAAGT
CAGCGCTAAGTCGGCGCTGGCTTGTTGCATAAAGTCAGCGCTATGTCAGC
GCTGACGTGTAGCATAATGGGTAAGCTGTACATCCAACAGAGGGGACGCC
GCTTTGTCTTTTCTCGTGGACAGGTGTGAGGCAGTTCTTGTGTCCCCACC
TACCTGCACGTGCAGAGGCTTGTACTACACTCCGAACGTGGACCATGAAC
GCATAACAAATACCTGTGTCCACAGTAACCAGCGCGTGCACTGCCCACAG
CAAAAGCAATAGTGGCATACATCCCTGCCCTGCCAACGAACCACACACGC
CGTGCCTTGCAGCTACCGCACGATCATGGGCTTAGACACCGACTGCAACG
TGCCAAGAGTGAACTACTTCTCGAACCCGGATGTGTACTACCTGGGCCTG
CCGACCGGAACCTCAACCGAAAACAACGCGCGACAGATCACGGAGAACAT
GGTGAGAATCGAGAGAGTCGAGGGCTCTCTCTCTCTGGTGCCTGCTGACG
TGCGCAGACGTTTCTCGTGGAACATTCTCGCCGTCAAGGGGGATGACCCG
TCAGGCGTTCGTGGCGGTGCCGCGTTTTCGCAGCTAGCTGTTGTTTTGTT
GGTGTGCTACATATAACGTGGAGCGCCTCCTCGTGCACCGTCACTCCCCT
GCAGCCAAGTTCCCAGCAAAATCCCATAGTACGACGAATACCGCTTTTGC
CACCCCAAGGTAAACATGAAGCCGTGGAATGACGTGCCCGACTCCCCACG
TCGTCACCTTGATGCACCATCTCCTCACAGCTAACCGTAGCGAACTTCAG
GGAGACGGAGGAAGAGGAGGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGC
CAGGGTGCGTGC
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1189:490..7601+

>mRNA_E-fasciculatus_F_contig1189.1478.1 ID=mRNA_E-fasciculatus_F_contig1189.1478.1|Name=mRNA_E-fasciculatus_F_contig1189.1478.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3132bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1189:490..7601+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAGCGCCCTCGGGCAACCATTTTCAAGCCGGAGGGTCTCGCGCGGCATTC
GGCGATGAGACCTACCCGAGGCTTCCTTCAAGGTCTATGTGGAATTACCC
TCCTGCTTCGAACGCTTGTGCGAACATCTGCCGAGGAATATGTTCCCGAT
GCCGGTGTCGGAAAGGTGCACCCGATCTGTGACTCCGGTAGCGGGGGTAT
TTGCCGTTCAGAAGAGGAGCTCGTTGCTTCGCTTGAGAGGGACGAGCACA
TCGCTGAAGCGCCCTCGGGCAACCATTTTCAAGCCGGAGGGTCTCGCGCG
GCATTCGGCGATGAGACCTACCCGAGGCTTCCTTCAAGGTCTATGTGGAA
TTACCCTCCTGCTTCGAACGCTTGTGCGAACATCTGCCGAGGAATATGTT
CCCGATGCCGGTGTCGGAAAGGTGCACCCGATCTGTGACTCCGGTAGCGG
GGGTATTTGCCGTTCAGAAGAGGAGCTCGTTGCTTCGCTTGAGAGGGACG
AGCACATCGCTGTCACGAGCAGTATCGAAGTGGGTGAGCTGCTGTGCGAA
AGCCTGGTCGAGGCACCGGAGTCCACTCTACTGCGGTTTGCCATCACCTC
AAACGAGTCACGAGCAGTATCGAAGTGGGTGAGCTGCTGTGCGAAAGCCT
GGTCGAGGCACCGGAGTCCACTCTACTGCGGTTTGCCATCACCTCAAACG
AGACGGTGGTTGCTACGCGCACTTCTTTTTCCGTTGTCGATGGAGACGTT
TTTACGGACAGCATCGATCGCAAGACGGTGGTTGCTACGCGCACTTCTTT
TTCCGTTGTCGATGGAGACGTTTTTACGGACAGCATCGATCGCAAGGTGT
GGATTGGAGATGTGGTCGACCCCGCGCCTCCAGCCGACTCCGTTCCCAGC
ACTATCAGCATGACCTGGACCACCCCATGCGATGTCGAGGTGTGGATTGG
AGATGTGGTCGACCCCGCGCCTCCAGCCGACTCCGTTCCCAGCACTATCA
GCATGACCTGGACCACCCCATGCGATGTCGAGACCTTCTTGCTCAAGATG
ACGTCGGGCAGCACACAAGTGAGATCGGTGCCATGTGCGGCGGGTTCAAG
CAGCGACATCTGCATGGTTGAGACCTTCTTGCTCAAGATGACGTCGGGCA
GCACACAAGTGAGATCGGTGCCATGTGCGGCGGGTTCAAGCAGCGACATC
TGCATGGTTGAGCTCGAGGTGGACTTTAGCGAGGAAGACGATCCCGTCGA
GGTGGAAGCAGAAGACCCTAGCTCGCAAAGCAAGACGGAGGGCGGTGTCA
GCATGGCGAGCGATGTCGGCGCGCTTCCGCTCGAGGTGGACTTTAGCGAG
GAAGACGATCCCGTCGAGGTGGAAGCAGAAGACCCTAGCTCGCAAAGCAA
GACGGAGGGCGGTGTCAGCATGGCGAGCGATGTCGGCGCGCTTCCGGAGT
TGCCGTCTGCGACGATGCGCGAGGTGAAAGGACCCTCGCACAACCGAGGA
GGACATGAGCTCGATAAAAAGGGGGATGCTGCTGTAACGCCAAGCCGCAG
CGGCCGCGGGCTACAGTCTTCTACTCAGGAGTTGCCGTCTGCGACGATGC
GCGAGGTGAAAGGACCCTCGCACAACCGAGGAGGACATGAGCTCGATAAA
AAGGGGGATGCTGCTGTAACGCCAAGCCGCAGCGGCCGCGGGCTACAGTC
TTCTACTCAGGTTGCTGTGATGGTCCTCTACAACCCGGAGGCGATGAACT
CGCTGGGAGGCCTGGAGAGTCAGCAGATGGAGACAACGATCGCCGAAGCG
TTCGTGCAGACGAATCAAGCCATGCAAAACTCGGACATTCCGCTGGAGAT
CGTCCTCGTTCACGTGGCCCAGGTTGCTGTGATGGTCCTCTACAACCCGG
AGGCGATGAACTCGCTGGGAGGCCTGGAGAGTCAGCAGATGGAGACAACG
ATCGCCGAAGCGTTCGTGCAGACGAATCAAGCCATGCAAAACTCGGACAT
TCCGCTGGAGATCGTCCTCGTTCACGTGGCCCAGCTCCCTTACTCCCAGG
AGGGCGCCGCCATCGCTGCCATAGACGTCCTTACCGGCTTAGCGAACAGC
GAGGAAGTGGAGAGCCTACGAGATGCGCATTCTGCCGATTTGGTGCAGCT
GATAACTCCCTTACTCCCAGGAGGGCGCCGCCATCGCTGCCATAGACGTC
CTTACCGGCTTAGCGAACAGCGAGGAAGTGGAGAGCCTACGAGATGCGCA
TTCTGCCGATTTGGTGCAGCTGATAAGCGATTTTACGGGGTCCTGCGGTG
CTGGGCGATTTTACGGGGTCCTGCGGTGCTGGCTTCGTCTTCAACGGCTT
CCCGAACTCAGGATTTTCCGTGGCCAGGGCAACCTGCATTGAAAACTTTA
CCCATACACCTTCGTCTTCAACGGCTTCCCGAACTCAGGATTTTCCGTGG
CCAGGGCAACCTGCATTGAAAACTTTACCCATACACATGAGATCGGACAT
AACTTAGGGTGCAGGCACGACAGAGGAAACGATGCCGAGAGCCAAACGGA
GTACGCTCATGGCTTGCGGTACTGTACGGGCATCAACAGATGAGATCGGA
CATAACTTAGGGTGCAGGCACGACAGAGGAAACGATGCCGAGAGCCAAAC
GGAGTACGCTCATGGCTTGCGGTACTGTACGGGCATCAACAGCTACCGCA
CGATCATGGGCTTAGACACCGACTGCAACGTGCCAAGAGTGAACTACTTC
TCGAACCCGGATGTGTACTACCTGGGCCTGCCGACCGGAACCTCAACCGA
AAACAACGCGCGACAGATCACGGAGAACATGCTACCGCACGATCATGGGC
TTAGACACCGACTGCAACGTGCCAAGAGTGAACTACTTCTCGAACCCGGA
TGTGTACTACCTGGGCCTGCCGACCGGAACCTCAACCGAAAACAACGCGC
GACAGATCACGGAGAACATGCTAACCGTAGCGAACTTCAGGGAGACGGAG
GAAGAGGAGGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGCCAGGGTGCGT
GCTAACCGTAGCGAACTTCAGGGAGACGGAGGAAGAGGAGGAAGAGGAAG
AGGAAGAGGAGGAGGAGGAGCCAGGGTGCGTG
back to top