prot_E-fasciculatus_F_contig11876.1467.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11876.1467.1
Unique Nameprot_E-fasciculatus_F_contig11876.1467.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length50
Homology
BLAST of mRNA_E-fasciculatus_F_contig11876.1467.1 vs. uniprot
Match: D7G4E0_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E0_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 5.580e-9
Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 MKTKRAGAMGILPILPIVLLALGGTLASAGWPFKGRKVHNEVHLTHAA 48
            MKT  A  MGI+P+LPIVLLAL GT  SA + F+GR  HNE +L H A
Sbjct:   11 MKTVTACTMGIVPVLPIVLLALSGTSVSARFAFRGRNAHNEGNLEHVA 58          
BLAST of mRNA_E-fasciculatus_F_contig11876.1467.1 vs. uniprot
Match: A0A6H5KHK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK8_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 9.100e-9
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    9 MGILPILPIVLLALGGTLASAGWPFKGRKVHNEVHLTHAA 48
            MGI+PILPIVLLAL GT ASA + F+GR  HNE +L H A
Sbjct:    1 MGIVPILPIVLLALSGTSASASFTFRGRDAHNEGNLEHVA 40          
BLAST of mRNA_E-fasciculatus_F_contig11876.1467.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.560e-6
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    6 AGAMGILPILPIVLLALGGTLASAGWPFKGRKVHNEVHLT 45
            A AMG++PILPIVLLAL GT ASAG  F+G  V NE +L+
Sbjct:    3 AKAMGVVPILPIVLLALSGTPASAGSAFRGLNVRNEANLS 42          
BLAST of mRNA_E-fasciculatus_F_contig11876.1467.1 vs. uniprot
Match: D7G7F0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F0_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 6.140e-6
Identity = 27/44 (61.36%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    1 MKTKRAGAMGILPILPIVLLALGGTLASAGWPFKGRKVHNEVHL 44
            MKT  AG MGI+PI   VLLAL GTLASAG  F G   HNE ++
Sbjct:    1 MKTMAAGTMGIVPI---VLLALSGTLASAGSAFSGSSAHNEGNV 41          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11876.1467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G4E0_ECTSI5.580e-960.42N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5KHK8_9PHAE9.100e-967.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWJ0_9PHAE1.560e-665.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7F0_ECTSI6.140e-661.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11876contigE-fasciculatus_F_contig11876:2728..2877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11876.1467.1mRNA_E-fasciculatus_F_contig11876.1467.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11876 2704..2877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11876.1467.1 ID=prot_E-fasciculatus_F_contig11876.1467.1|Name=mRNA_E-fasciculatus_F_contig11876.1467.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=50bp
MKTKRAGAMGILPILPIVLLALGGTLASAGWPFKGRKVHNEVHLTHAAS*
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