mRNA_E-fasciculatus_F_contig11871.1464.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11871.1464.1
Unique NamemRNA_E-fasciculatus_F_contig11871.1464.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig11871.1464.1 vs. uniprot
Match: A0A6H5JYN6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYN6_9PHAE)

HSP 1 Score: 563 bits (1451), Expect = 1.190e-200
Identity = 274/281 (97.51%), Postives = 278/281 (98.93%), Query Frame = 1
Query:    1 VDDDHARRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQVGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPLASKLPKA 843
            + D+  RRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQ+GLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGV+TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPLASKLPKA
Sbjct:  140 LSDECKRRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQIGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPLASKLPKA 420          
BLAST of mRNA_E-fasciculatus_F_contig11871.1464.1 vs. uniprot
Match: A0A835YUS8_9STRA (Ribosomal protein L3 superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS8_9STRA)

HSP 1 Score: 461 bits (1185), Expect = 1.270e-160
Identity = 220/281 (78.29%), Postives = 252/281 (89.68%), Query Frame = 1
Query:    1 VDDDHARRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQVGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPLASKLPKA 843
            + D+  RRFYK+WY SKKKAFTRYAKK A++P E++ EL RIK+Y QVVRVIAHTQVGLVKLR KKAH+ EIQVNGG VA KV FARGLFE++VPVD+VFAKDECID+LGA+KGHGTEGV+TRWGVTRL RKTHRGLRKVACIG+WHPARVSFSVARAGQHGYHHRTE+NKKIYR+GKKGD ++ STEADLTVK ITP+GGFPHYGE+NEDWLM+KG V+G KKRC+TLRKSL + S R ++E ++LKFIDTSSKYGHGRFQT EEKDKF+GPLAS+   A
Sbjct:  110 LSDEIRRRFYKNWYKSKKKAFTRYAKKCAESPAEVEKELERIKKYCQVVRVIAHTQVGLVKLRVKKAHVMEIQVNGGSVADKVAFARGLFEKQVPVDSVFAKDECIDILGATKGHGTEGVVTRWGVTRLARKTHRGLRKVACIGSWHPARVSFSVARAGQHGYHHRTEINKKIYRMGKKGDESACSTEADLTVKGITPMGGFPHYGEVNEDWLMIKGGVVGPKKRCVTLRKSLTTLSARRYMEAIDLKFIDTSSKYGHGRFQTAEEKDKFMGPLASRAAAA 390          
BLAST of mRNA_E-fasciculatus_F_contig11871.1464.1 vs. uniprot
Match: H6WB96_VAULI (Ribosomal protein L3 superfamily protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB96_VAULI)

HSP 1 Score: 450 bits (1158), Expect = 1.870e-156
Identity = 211/280 (75.36%), Postives = 250/280 (89.29%), Query Frame = 1
Query:    1 VDDDHARRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQVGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPLASKLPK 840
            + D+  RR YK+W++SKKKAFT YAKKFA+ P+EI+ +L +IK++ QVVRVIAHTQVGLVKLR KKAHI EIQVNGG V  KVDFA+GLFE+ VP+ +VF+KDECIDVLGA+KGHGT+GV+ RWGVTRL RKTHRGLRKVACIG+WHPARV+FSVARAGQHGYHHRTE+NKKIYRIG+KGD  S +TEADLTVK ITP+GGFPHYGEINEDW+M+KG ++G KKRC+TLRKSL+S S R ++E ++LKFIDTSSKYGHGRFQT +E+DKF+GPLASK PK
Sbjct:  110 LSDECRRRMYKNWHSSKKKAFTAYAKKFAEKPEEIERDLKKIKKHCQVVRVIAHTQVGLVKLRVKKAHIMEIQVNGGTVEEKVDFAKGLFERHVPISSVFSKDECIDVLGATKGHGTKGVVARWGVTRLARKTHRGLRKVACIGSWHPARVAFSVARAGQHGYHHRTEINKKIYRIGQKGDEGSCTTEADLTVKSITPMGGFPHYGEINEDWIMVKGGLVGTKKRCVTLRKSLLSLSSRRYMESIDLKFIDTSSKYGHGRFQTSDERDKFMGPLASKAPK 389          
BLAST of mRNA_E-fasciculatus_F_contig11871.1464.1 vs. uniprot
Match: A0A7S3Y2B0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2B0_HETAK)

HSP 1 Score: 435 bits (1119), Expect = 1.160e-150
Identity = 209/275 (76.00%), Postives = 240/275 (87.27%), Query Frame = 1
Query:    1 VDDDHARRFYKHWYTSKKKAFTRYAKKFADAPQ-EIDAELGRIKQYAQVVRVIAHTQVGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPL 822
            +D+   RRFYK+WY SKKKAFT+YAKK+ +    +I AEL RIK+Y QVVRVIAHTQ   + LR KKAHI EIQVNGG V+ KVDFA+ LFE+++ VD+VFAKDECIDVLGASKGHGTEGV+TRWGVTRLPRKTHRGLRKVACIGAWHP+RVSFSVAR+GQHGYHHRTE+NKKIY+IGKKGD  + +TEADLTVK ITP+GGFPHYGEINEDWLMLKGCV+GCKKR +TLRKSL++ S+R HLE + L F+DTSSK GHGRFQT EEK KF+GPL
Sbjct:  110 LDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVSFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPL 384          
BLAST of mRNA_E-fasciculatus_F_contig11871.1464.1 vs. uniprot
Match: A0A7S2V865_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V865_9STRA)

HSP 1 Score: 435 bits (1118), Expect = 1.820e-150
Identity = 204/277 (73.65%), Postives = 240/277 (86.64%), Query Frame = 1
Query:    1 VDDDHARRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQVGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPLASK 831
            + ++  RRFYK+WY SK+KAFT+YAKK+ D+P ++D EL R+K+Y QV+RVIAHTQ+  VKLRQKKAHI EIQVNGG V  KVDF + LFE++V VD+VFA+DE ID +GASKGHGTEGV+TRWGVTRLPRKTHRGLRKVACIG WHPARV ++VAR GQHGYHHRTE+NKKIYRIGKKGD  S STE DLTVK ITP+GGFPHYGE+NEDWLMLKG V+GCKKR +TLRKSL++ S+R +LE++EL F+DTSSK GHGRFQ  EEK KF+GPLASK
Sbjct:  110 LSEECKRRFYKNWYKSKRKAFTKYAKKYTDSPADLDFELKRMKKYCQVIRVIAHTQIRKVKLRQKKAHIMEIQVNGGSVEDKVDFGKNLFEKEVSVDSVFAQDEVIDTIGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGPWHPARVPYTVARTGQHGYHHRTEVNKKIYRIGKKGDPGSCSTETDLTVKSITPMGGFPHYGEVNEDWLMLKGAVVGCKKRPVTLRKSLLTLSKRRYLEKIELNFVDTSSKLGHGRFQDAEEKAKFMGPLASK 386          
BLAST of mRNA_E-fasciculatus_F_contig11871.1464.1 vs. uniprot
Match: A0A7S2SCP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCP9_9STRA)

HSP 1 Score: 431 bits (1108), Expect = 7.950e-149
Identity = 201/277 (72.56%), Postives = 240/277 (86.64%), Query Frame = 1
Query:    1 VDDDHARRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQVGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPLASK 831
            + D+  RRFYK+WY SK+KAF++Y K+F ++P E +A+L R+K   QV+RVIAHTQ+  + LRQKKAHI EIQVNGG +A KVDFA GLFE++V V+ VFAKDE IDVLGA+KGHGTEGVI RWG+TRLPRKTHRGLRKVACIGAWHP+RV+FSVAR+GQHGYHHRTE+NKKI+RIGKK D  SAST+ DLT K ITPLGGFPHYG +NEDW+M++GC +G KKR +T+RKSLM+HS R HLE++ LKFIDTSSK+GHGRFQT EEKDKFLGPLAS+
Sbjct:  119 LSDEVRRRFYKNWYKSKQKAFSKYTKQFKESPAETEAQLQRMKDQCQVIRVIAHTQIAKIGLRQKKAHIMEIQVNGGSIADKVDFAHGLFEKQVTVEDVFAKDENIDVLGATKGHGTEGVIARWGITRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIFRIGKKDDKTSASTDNDLTEKSITPLGGFPHYGVVNEDWIMIRGCCVGVKKRVVTIRKSLMAHSSRKHLEEINLKFIDTSSKFGHGRFQTAEEKDKFLGPLASR 395          
BLAST of mRNA_E-fasciculatus_F_contig11871.1464.1 vs. uniprot
Match: A0A812Q7Y8_SYMMI (Rpl3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Q7Y8_SYMMI)

HSP 1 Score: 421 bits (1081), Expect = 1.170e-145
Identity = 198/277 (71.48%), Postives = 238/277 (85.92%), Query Frame = 1
Query:    1 VDDDHARRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQVGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPLASK 831
            + D+  RRFYK+WY SK+KAFT+YAKKFA+ PQ+I+ EL RIK Y QVVRV+AHTQ+  +KLRQK A + EIQ+NGG+VA KVDFA+ LFEQ+V VD+VFA+ E +D+  A++GHGTEGV++RWGVTRLPRKTHRGLRKVACIGAWHP+RV F+VARAGQ GYHHRTE+NK+I RIGKKGD  S STE DLT K ITP+GGFPHYGE+NEDWLM+KGCV G +KR +TLRKS+++ +RR HLE + +KFIDTSSKYGHGRFQT EEK+KFLG LASK
Sbjct:   57 LSDEVKRRFYKNWYRSKRKAFTKYAKKFAEKPQDIENELNRIKNYCQVVRVLAHTQIRKIKLRQKVAQLLEIQINGGEVAEKVDFAKSLFEQEVSVDSVFAEGEVLDICSATRGHGTEGVVSRWGVTRLPRKTHRGLRKVACIGAWHPSRVRFTVARAGQKGYHHRTEINKRILRIGKKGDTRSCSTEMDLTEKSITPVGGFPHYGEVNEDWLMIKGCVGGSRKRPVTLRKSIVAPTRRSHLEPLNVKFIDTSSKYGHGRFQTLEEKNKFLGTLASK 333          
BLAST of mRNA_E-fasciculatus_F_contig11871.1464.1 vs. uniprot
Match: A0A8K1FED4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FED4_PYTOL)

HSP 1 Score: 420 bits (1080), Expect = 1.090e-144
Identity = 199/275 (72.36%), Postives = 234/275 (85.09%), Query Frame = 1
Query:    1 VDDDHARRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQVGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPLA 825
            ++++  RRFYK+WY SK+KAFT+Y+KK+   P EI+ EL RIK+Y QVVRV+ HTQ+  V LRQKKAH+ E+QVNGG VA KVDFA+ LFE++VPV AVFA+DE IDV+G +KGHG EGVITRWGV+RLPRKTHRGLRKVACIGAWHP+RV FSVARAGQHGYHHRTE+NKKIYRIG  GD  S  TEADLT K ITPLGGFPHYG + EDW+M+KG V+G KKR ITLRKSL+ H++R  LE+++LKFIDTSSK+GHGRFQT EEK KFLGPLA
Sbjct:  110 LNEEVKRRFYKNWYRSKRKAFTKYSKKYQTNPAEIENELNRIKKYCQVVRVLTHTQIRKVNLRQKKAHLIEVQVNGGSVAEKVDFAKSLFEKQVPVSAVFAQDEMIDVIGVTKGHGFEGVITRWGVSRLPRKTHRGLRKVACIGAWHPSRVRFSVARAGQHGYHHRTEINKKIYRIGAAGDAKSCMTEADLTEKSITPLGGFPHYGVVKEDWVMIKGAVVGVKKRVITLRKSLLVHTKRSALEEIKLKFIDTSSKFGHGRFQTVEEKAKFLGPLA 384          
BLAST of mRNA_E-fasciculatus_F_contig11871.1464.1 vs. uniprot
Match: A0A7S1BQX5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQX5_9STRA)

HSP 1 Score: 414 bits (1065), Expect = 3.300e-143
Identity = 199/277 (71.84%), Postives = 236/277 (85.20%), Query Frame = 1
Query:    1 VDDDHARRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQVGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPLASK 831
            + +++ RR YK+WY SK+KA+T+YAKK+ +   EI+AEL RIK++A VVRVI H+QV  + LR KKAHI E+Q+NGGDVAAKVDFA+ LFE++V VD+VFAKDE +DV+G +KG G EGV TRWGVTRLPRKTHRGLRKVACIG+WHPARVS +V RAGQ+GYHHRTELNKK+YRIGK GD +S  TEADLTVK ITP+GGFPHYGEI EDW+M+KG V+G KKR + LRKSLM+HS R HLE ++LKFIDTSSK GHGRFQT EEK KFLGPLASK
Sbjct:   58 LSEEYKRRCYKNWYASKRKAYTKYAKKYENGGVEIEAELSRIKKFASVVRVITHSQVKKLNLRIKKAHIMEVQINGGDVAAKVDFAKSLFEKEVTVDSVFAKDENLDVIGVTKGGGYEGVTTRWGVTRLPRKTHRGLRKVACIGSWHPARVSSTVPRAGQNGYHHRTELNKKVYRIGKAGDNSSCQTEADLTVKSITPMGGFPHYGEIREDWVMVKGAVVGVKKRPLILRKSLMNHSSRKHLENIDLKFIDTSSKMGHGRFQTAEEKAKFLGPLASK 334          
BLAST of mRNA_E-fasciculatus_F_contig11871.1464.1 vs. uniprot
Match: A0A1E7FHM7_9STRA (Ribosomal protein L3 n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FHM7_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 1.490e-142
Identity = 202/279 (72.40%), Postives = 237/279 (84.95%), Query Frame = 1
Query:    1 VDDDHARRFYKHWYTSKKKAFTRYAKKFA-DAPQEIDAELGRIKQYAQVVRVIAHTQVGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPLASKL 834
            ++++  RR YK+WY +KKKAFT+YAKK   D  ++I+AEL RIK++  +VRVIAHTQV  + LR KKAHI EIQ+NGGDVAAKVDFA+ LFE++V VD+VF+KDE IDVLG +KG G EGV TRWGVTRLPRKTHRGLRKVACIG+WHPARVS +VARAGQ+GY HRTELNKK+YRIGKK D AS  T+ADLT K ITP+GGF HYGE+NEDWLMLKG V+G KKR + LRKS+M H+ R HLE++ELKFIDTSSK GHGRFQTKEEK KF+GPLASKL
Sbjct:   58 LNEEFRRRMYKNWYRAKKKAFTKYAKKHTEDGGKDIEAELERIKKFCTIVRVIAHTQVKKLNLRLKKAHIMEIQINGGDVAAKVDFAKALFEKEVTVDSVFSKDENIDVLGVTKGRGYEGVTTRWGVTRLPRKTHRGLRKVACIGSWHPARVSTTVARAGQNGYFHRTELNKKVYRIGKKDDKASCQTDADLTEKGITPMGGFVHYGEVNEDWLMLKGAVVGVKKRPLVLRKSMMKHTSRKHLEKIELKFIDTSSKLGHGRFQTKEEKAKFMGPLASKL 336          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11871.1464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYN6_9PHAE1.190e-20097.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUS8_9STRA1.270e-16078.29Ribosomal protein L3 superfamily protein n=1 Tax=T... [more]
H6WB96_VAULI1.870e-15675.36Ribosomal protein L3 superfamily protein n=1 Tax=V... [more]
A0A7S3Y2B0_HETAK1.160e-15076.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V865_9STRA1.820e-15073.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SCP9_9STRA7.950e-14972.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A812Q7Y8_SYMMI1.170e-14571.48Rpl3 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A8K1FED4_PYTOL1.090e-14472.36Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1BQX5_9STRA3.300e-14371.84Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A1E7FHM7_9STRA1.490e-14272.40Ribosomal protein L3 n=2 Tax=Bacillariaceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11871contigE-fasciculatus_F_contig11871:126..4231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score562.8
Seed ortholog evalue9.3e-158
Seed eggNOG ortholog2880.D7FHR5
Preferred nameRPL3
KEGG koko:K02925
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
EggNOG free text desc.ribosomal large subunit assembly
EggNOG OGsCOG0087@1,KOG0746@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Hectar predicted targeting categoryother localisation
Exons6
Model size846
Cds size846
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11871.1464.1prot_E-fasciculatus_F_contig11871.1464.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11871 126..4231 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927697.8611505-CDS-E-fasciculatus_F_contig11871:125..2421622927697.8611505-CDS-E-fasciculatus_F_contig11871:125..242Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 126..242 -
1695995654.498854-CDS-E-fasciculatus_F_contig11871:125..2421695995654.498854-CDS-E-fasciculatus_F_contig11871:125..242Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 126..242 -
1622927697.8723943-CDS-E-fasciculatus_F_contig11871:606..7141622927697.8723943-CDS-E-fasciculatus_F_contig11871:606..714Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 607..714 -
1695995654.5114849-CDS-E-fasciculatus_F_contig11871:606..7141695995654.5114849-CDS-E-fasciculatus_F_contig11871:606..714Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 607..714 -
1622927697.8870041-CDS-E-fasciculatus_F_contig11871:1763..18801622927697.8870041-CDS-E-fasciculatus_F_contig11871:1763..1880Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 1764..1880 -
1695995654.522039-CDS-E-fasciculatus_F_contig11871:1763..18801695995654.522039-CDS-E-fasciculatus_F_contig11871:1763..1880Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 1764..1880 -
1622927697.8997927-CDS-E-fasciculatus_F_contig11871:2208..24061622927697.8997927-CDS-E-fasciculatus_F_contig11871:2208..2406Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 2209..2406 -
1695995654.53209-CDS-E-fasciculatus_F_contig11871:2208..24061695995654.53209-CDS-E-fasciculatus_F_contig11871:2208..2406Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 2209..2406 -
1622927697.9134502-CDS-E-fasciculatus_F_contig11871:3596..37341622927697.9134502-CDS-E-fasciculatus_F_contig11871:3596..3734Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 3597..3734 -
1695995654.542319-CDS-E-fasciculatus_F_contig11871:3596..37341695995654.542319-CDS-E-fasciculatus_F_contig11871:3596..3734Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 3597..3734 -
1622927697.9280577-CDS-E-fasciculatus_F_contig11871:4063..42311622927697.9280577-CDS-E-fasciculatus_F_contig11871:4063..4231Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 4064..4231 -
1695995654.5516105-CDS-E-fasciculatus_F_contig11871:4063..42311695995654.5516105-CDS-E-fasciculatus_F_contig11871:4063..4231Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11871 4064..4231 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11871.1464.1

>prot_E-fasciculatus_F_contig11871.1464.1 ID=prot_E-fasciculatus_F_contig11871.1464.1|Name=mRNA_E-fasciculatus_F_contig11871.1464.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=282bp
VDDDHARRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVR
VIAHTQVGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVF
AKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPAR
VSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLG
GFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFI
DTSSKYGHGRFQTKEEKDKFLGPLASKLPKA*
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mRNA from alignment at E-fasciculatus_F_contig11871:126..4231-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11871.1464.1 ID=mRNA_E-fasciculatus_F_contig11871.1464.1|Name=mRNA_E-fasciculatus_F_contig11871.1464.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4106bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11871:126..4231- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCGACGATGATCACGCGCGAAGGTTCTACAAGCACTGGTACACGTCGAA GAAGAAGGCGTTCACCCGGTACGCCAAGAAGTTCGCGGACGCCCCGCAGG AGATCGACGCTGAGCTCGGCCGCATCAAGCAGTATGCCCAGGTCGTGCGC GTCATCGCCCACACCCAGGTAAGAATCGCGCGTTTCGTGATTGCAATACC CGCATGCGGGTTTTGTTTCGCCAAGTCGACCCACATGCGGTGTTGGTTGT ACGTCGTGCGCGGTCGTGGAGGTTGTCTTGGCAGTTGGGAACAGCAAGCT GTACGTACGCGCACGGCGTGTGCATCATACTGCTGACGCGCGGACGAGCC GCAAGACGAATCCGAAACGGTGTTCATCGTATTTTGGTCGTCATCATAGC CTTGCTTCTGCCGTTGCTGCCATATTGCCATCCATGTTGCCATAAGCAAT CGATGCTTGACTTGGCGCTTCTCCCCCGGCTCCTTCTCCTTGTACAGGTC GGCCTTGTGAAGCTGAGGCAGAAGAAGGCGCACATCTGCGAGATCCAGGT GAACGGTGGCGACGTGGCCGCTAAGGTCGACTTCGCCCGTGGCCTGTTCG AGCAGAAGGTGCCCGTGGACGCCGTCTTCGCCAAGGTGCGTAACGATTCC TGCGCGTCTACGTTGGTTAATGAAACCACAACCTGTCGTAAACAACCTCT AGGCGCGGTGCGGATAATGTTTCATACTTTTTGGTGTTGAATGACGGTTG GAGAGTGTTGGCAGAATCGGATCTCGCCCAGGCATGTCTGGCACATGTCA CAACCAGAGCAGGTTTTTCTCTTGAAACACGTGAAGCGATACACACTAGC CAAGCCAAGACTTTTTCAGTTCCCTAGCAGGAAAGAAGAAGAGGAAGCTC TCGGTGCTGGGCGCACTGGATTGTTTGTCCTATGTAGTGCTTAATAGGAT GGGGTCGGTACTCGTGTCGTTCCCGTCACACCCGAGCTCTTCAGGAAACG GGGCAGTGTTGACGTGGAGTTTTTTGGGATGGAGCGCAATGAAGCACGAT TCCGGTAAGGCGGAGGACAAAGCCCCAGCCGCCAAGTTCCCGAATACCCT GGGGAGTGCTTGATTTGTTTCCATTGATGGTGCTGAGTAGTTGATTTGTT TCCATTGATGGTGCTGAGTAGTGCTCGTCACCTCACTGCGCGTGGTGCTT TGCGGTTGGCATGTTGGGTCGGGGTTATGAAGTAGAAGTCGTGGTGAAAC CTTATTGGGCGATGTTTTACTCGGGGCTGGCCGCCAATCCGCATCTATGG TGTTGACGGTACAAAGAAGCCCTCGTTCGGTCGACCATTCCATTTTTTGT TGTCGTTTTTGTACAAATCAGTTGGTGCGGATACGATTTAGTTGTGCAGG CAGCTTCACGGGGCGCGGCGCCTGTCCCCTACAGGTGTTGCGCCCTTCTT CGGTTCAGTCGAAAGCCTTCGGGCAGAAAGCTGAACCGGTTGCCCAGATG GAAAATCACACCAGCTTTACACACTCACCGAGCCGGAGCTTCGGCGCGGA TGTGCTTGGCCTTACACTGCTGGATATTTTTGAAGTCAGCGGTACTCCCT CCGAGGCACCCTGAGTTGGCCGTGTCGTGTTTGACTAGCGCTCACTTCGT GCCGCTTGAGAGGGTCGTTTTATGTGAGGTTCGGCTTTGGTTAGGTGTGG CCCATTCCTCTCCGAAGTATCCTGTCTTTGTGCGTGTTGTCTTCGAACAC CCCAGTCACTGCAGTGGGAGGGATGCATATCTTATGCTGGGAGTATCGCG TTTTCTCTCTGTTGCTGTTGCGCAGGACGAGTGCATCGACGTGCTGGGAG CCTCCAAGGGTCACGGTACCGAGGGCGTGATCACTCGTTGGGGTGTGACC CGCCTTCCCCGCAAGACCCACCGTGGTCTCCGCAAGGTGGCCTGCATCGG CGCGTGGCACCCTGCCCGCGTCAGCTTCTCCGTCGCCCGCGCCGGTCAGC ACGGATACCACCACCGTACCGAGGTGAGTTTTTTCCTTGTCGTTTTTTCC GCCCCGCGCGTGGTGCTGTGCGCTTGTCTGGAGCTGTTAAGGGTGTGGTC CCCTAGTGGGAGGATCTTCTCGGTAGAGTGAGTTACCCGACTGCACTCTC TTGATGCCCTGCGGCTGTTTTGTGTTTCATGCGTTGCGGTGGCAAAAGGT TGGTGGATGTAGCTCATTCGTTTTGTGGCACCGCTGTTTTTGCTGTCTCG ACATGCTCTATCTTGCAGCAAATTGTTTCACGCCAGCTTGCGTATTTACA ACCGTCGCTGCTGCCTGCTTCTTTCCTTGCTGTTGGTTTTTGACTGAACA GCTCAACAAGAAGATCTACCGGATCGGAAAGAAGGGCGACGTCGCTTCGG CCTCCACGGAGGCTGACCTTACGGTCAAGCACATCACCCCTCTCGGTGGA TTCCCCCACTATGGCGAGGTACGACCAGATCAGACTTTACCATTCATCTT CGTCCTTTCATTAGTTGCGACAGATGGTTTACAGATGATTTCTTGACCTT TTCCTAGAAACTCGTGTCATGAGATGAGGTGACCGTTCCCTGGCATGGAC AAATATCTAGGTGGGTCCTCATCATAAATCAGCCTTAATATTAATTATAG AACTTGTTGAGATTCCCTGTTGTCCATGCCCTTTGAAGGTGCAAGTTTAA GTTTTTCGTTCTGCCGTTCATTGGTGGCTCCCCGGAATATGAAGGTACAG TAGACGGTATGGGCATGACCAAGTACAGCGTGGTGATTCCCACACAACCG AAAAACTCGGGAGGTATAACTTGACGAACTTTTGAGATGGTGGCGGTATC AATCTGAGCGATGTGGAAGCTGCCTTTTTGCAGTCACTCCCGATCTCTTC AATTCTATCGCCCTCCCTTGCAGCGTAGTATTCACGTTTTGTTGAGTACG ACAGTTTTGGTTCCCGGCAGCTTCACGGGGCGCGGCCCATGTCCCCTACA GGGGTTGCGCCCTTTTTCGGTTCAGTCGAAAGCCTTCGGGTCGAAAAGCT GAACCGGTTGCCCAGATGAAACGCACACCAGCTTTACACACTCACCGAGC CGGAGCTTCGGCGCGGATGTGCTTGGCCTTACACTGCTGGACATTTCAGT TACCTAGTGTTGACGGGGTCGTGGGGCAGGTCAGCTTTACGGTTGGTTTC TTGGACCGTGGATGTCGTTTCCCTGCTTGTATTGGATCGTGTTGGTGTGT TGTTGCCCGAGGGTAGTCTGTCGCCTCATGTTGTCGAACGGGGGACTTAC TCGTTTTCGTGGAAACATAGAAGAGAGCACCTCTTCCCCTCGTTCCGACC ACAGAACACGAAGCACTGGCATACCTGTATGGGATCCCGAGGAAGCCCAC GGCGCACATTATTTTCGTAGCCTGTGACCGAAATATGGTGACAAGCCTGC CTCCTACTATTGGTTCCCCCAACGCTGAGCCTGGTTCCCGTGGTGTTTTG ACGTTTCTTTACGGCAGATCAACGAGGACTGGCTAATGCTCAAGGGCTGC GTCATCGGGTGCAAGAAGCGCTGCATCACCCTGCGCAAGTCTCTCATGAG CCACTCCCGCCGCATCCACCTCGAGGTTCGTATTGTCTGGTCATTTGTTT GTCGGTTTTGCTGTTTTTATCCACCGTTGACTTTTTCCGCTCTAATACGC CCAACGTTCGAGATTGGTTGGCACGCACATACCGTACTTGTCTTGGCCTC GCCAAGAAACTGAGCGCTCGAGAGCCGTTAGTAGTGCCATCGCTGTCTTG GGTGGGTGTTTGCCGACGTCGTGTCTGTTTCGTTTGTGTGTTGCTATTTT TTTTTTTCTTTTGTTCGGTTGCATTTTCGGATGCTACATCTTGTTCCGTT TTGTATAGCAAAAAGATAATTTGGGTACCTGTCTTAGCTCGAGCCACTCT GATACAAACTCGTGCCCTCGATGTTCTGTCGATCTTCAGCAAGTGGAGCT CAAGTTCATCGACACCTCGTCGAAGTACGGCCACGGACGCTTCCAGACCA AGGAGGAGAAGGACAAGTTCCTGGGCCCTCTTGCGTCCAAGCTGCCCAAG GCTTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11871:126..4231-

>mRNA_E-fasciculatus_F_contig11871.1464.1 ID=mRNA_E-fasciculatus_F_contig11871.1464.1|Name=mRNA_E-fasciculatus_F_contig11871.1464.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1692bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11871:126..4231- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCGACGATGATCACGCGCGAAGGTTCTACAAGCACTGGTACACGTCGAA
GAAGAAGGCGTTCACCCGGTACGCCAAGAAGTTCGCGGACGCCCCGCAGG
AGATCGACGCTGAGCTCGGCCGCATCAAGCAGTATGCCCAGGTCGTGCGC
GTCATCGCCCACACCCAGGTCGACGATGATCACGCGCGAAGGTTCTACAA
GCACTGGTACACGTCGAAGAAGAAGGCGTTCACCCGGTACGCCAAGAAGT
TCGCGGACGCCCCGCAGGAGATCGACGCTGAGCTCGGCCGCATCAAGCAG
TATGCCCAGGTCGTGCGCGTCATCGCCCACACCCAGGTCGGCCTTGTGAA
GCTGAGGCAGAAGAAGGCGCACATCTGCGAGATCCAGGTGAACGGTGGCG
ACGTGGCCGCTAAGGTCGACTTCGCCCGTGGCCTGTTCGAGCAGAAGGTG
CCCGTGGACGCCGTCTTCGCCAAGGTCGGCCTTGTGAAGCTGAGGCAGAA
GAAGGCGCACATCTGCGAGATCCAGGTGAACGGTGGCGACGTGGCCGCTA
AGGTCGACTTCGCCCGTGGCCTGTTCGAGCAGAAGGTGCCCGTGGACGCC
GTCTTCGCCAAGGACGAGTGCATCGACGTGCTGGGAGCCTCCAAGGGTCA
CGGTACCGAGGGCGTGATCACTCGTTGGGGTGTGACCCGCCTTCCCCGCA
AGACCCACCGTGGTCTCCGCAAGGTGGCCTGCATCGGCGCGTGGCACCCT
GCCCGCGTCAGCTTCTCCGTCGCCCGCGCCGGTCAGCACGGATACCACCA
CCGTACCGAGGACGAGTGCATCGACGTGCTGGGAGCCTCCAAGGGTCACG
GTACCGAGGGCGTGATCACTCGTTGGGGTGTGACCCGCCTTCCCCGCAAG
ACCCACCGTGGTCTCCGCAAGGTGGCCTGCATCGGCGCGTGGCACCCTGC
CCGCGTCAGCTTCTCCGTCGCCCGCGCCGGTCAGCACGGATACCACCACC
GTACCGAGCTCAACAAGAAGATCTACCGGATCGGAAAGAAGGGCGACGTC
GCTTCGGCCTCCACGGAGGCTGACCTTACGGTCAAGCACATCACCCCTCT
CGGTGGATTCCCCCACTATGGCGAGCTCAACAAGAAGATCTACCGGATCG
GAAAGAAGGGCGACGTCGCTTCGGCCTCCACGGAGGCTGACCTTACGGTC
AAGCACATCACCCCTCTCGGTGGATTCCCCCACTATGGCGAGATCAACGA
GGACTGGCTAATGCTCAAGGGCTGCGTCATCGGGTGCAAGAAGCGCTGCA
TCACCCTGCGCAAGTCTCTCATGAGCCACTCCCGCCGCATCCACCTCGAG
ATCAACGAGGACTGGCTAATGCTCAAGGGCTGCGTCATCGGGTGCAAGAA
GCGCTGCATCACCCTGCGCAAGTCTCTCATGAGCCACTCCCGCCGCATCC
ACCTCGAGCAAGTGGAGCTCAAGTTCATCGACACCTCGTCGAAGTACGGC
CACGGACGCTTCCAGACCAAGGAGGAGAAGGACAAGTTCCTGGGCCCTCT
TGCGTCCAAGCTGCCCAAGGCTTAACAAGTGGAGCTCAAGTTCATCGACA
CCTCGTCGAAGTACGGCCACGGACGCTTCCAGACCAAGGAGGAGAAGGAC
AAGTTCCTGGGCCCTCTTGCGTCCAAGCTGCCCAAGGCTTAA
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