mRNA_E-fasciculatus_F_contig11863.1459.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11863.1459.1 vs. uniprot
Match: A0A6H5L9S2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9S2_9PHAE) HSP 1 Score: 170 bits (431), Expect = 5.870e-46 Identity = 85/118 (72.03%), Postives = 99/118 (83.90%), Query Frame = 2
Query: 1193 QFRAGDIGLRERRQRYRTVVDEDD-FKSDCG-ECEDRAHVVVECSLYKA-KEVYMAELGKMEGRYREMFEAWNREDKTVDVLGHYKWVEKAGRDVGKIGRQGKTVFSHLWQSRKERLA 1537
+FR GDIGLRERR+R+RTV DEDD FK DCG EC+DR HVV EC LYK +EVY+ ELGK++G YREMFEAWNRE++TV V+GH +WVEKAGRD+ +I R GKT SHLWQSRKERLA
Sbjct: 112 KFRTGDIGLRERRRRHRTVDDEDDEFKCDCGFECKDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLA 229
BLAST of mRNA_E-fasciculatus_F_contig11863.1459.1 vs. uniprot
Match: A0A6H5K453_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K453_9PHAE) HSP 1 Score: 167 bits (424), Expect = 9.630e-46 Identity = 85/126 (67.46%), Postives = 100/126 (79.37%), Query Frame = 2
Query: 1169 GRRDKARRQFRAGDIGLRERRQRYRTVVDEDD-FKSDCG-ECEDRAHVVVECSLYKA-KEVYMAELGKMEGRYREMFEAWNREDKTVDVLGHYKWVEKAGRDVGKIGRQGKTVFSHLWQSRKERLA 1537
G K + +FR GDIGL ER +R+RT+ +EDD FK DCG ECEDR HVV EC LYK +EVY+ ELGK++G YREMFEAWNRE++TV VLGH +W EKAGRD+ +IGR GKT SHLWQSRKERLA
Sbjct: 42 GEEXKGKVKFRTGDIGLLERGRRHRTIDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGHRRWAEKAGRDIVRIGRLGKTFLSHLWQSRKERLA 167
BLAST of mRNA_E-fasciculatus_F_contig11863.1459.1 vs. uniprot
Match: A0A6H5J590_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J590_9PHAE) HSP 1 Score: 172 bits (435), Expect = 3.870e-45 Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 2
Query: 1193 QFRAGDIGLRERRQRYRTVVDEDD-FKSDCG-ECEDRAHVVVECSLYKA-KEVYMAELGKMEGRYREMFEAWNREDKTVDVLGHYKWVEKAGRDVGKIGRQGKTVFSHLWQSRKERLA 1537
+FR GDIGLRERR+R+RTV +EDD FK DCG ECEDR HVV EC LYK +E+YM ELGK++G YREMFEAWNRE++TV VLGH +WVEKAGRD+ +I R GKT SHLWQSRKERLA
Sbjct: 227 KFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKERELYMTELGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLA 344
BLAST of mRNA_E-fasciculatus_F_contig11863.1459.1 vs. uniprot
Match: A0A6H5KMG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG6_9PHAE) HSP 1 Score: 170 bits (431), Expect = 1.120e-44 Identity = 85/118 (72.03%), Postives = 99/118 (83.90%), Query Frame = 2
Query: 1193 QFRAGDIGLRERRQRYRTVVDEDD-FKSDCG-ECEDRAHVVVECSLYKA-KEVYMAELGKMEGRYREMFEAWNREDKTVDVLGHYKWVEKAGRDVGKIGRQGKTVFSHLWQSRKERLA 1537
+FR GDIGLRERR+R+RTV +EDD FK DCG ECEDR HVV EC LYK +EVY+ ELGK++G YREMFEAWNRE++TV V+GH +WVEKAGRD+ +I R GKT SHLWQSRKERLA
Sbjct: 216 KFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLA 333
BLAST of mRNA_E-fasciculatus_F_contig11863.1459.1 vs. uniprot
Match: A0A6H5K863_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K863_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.810e-44 Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 2
Query: 1193 QFRAGDIGLRERRQRYRTVVDEDD-FKSDCG-ECEDRAHVVVECSLYKA-KEVYMAELGKMEGRYREMFEAWNREDKTVDVLGHYKWVEKAGRDVGKIGRQGKTVFSHLWQSRKERLA 1537
+FR GDIGLRERR+R+RTV +EDD FK DCG ECEDR HVV EC LYK +EVY+ ELGK++G YREMFEAWNRE++TV VLGH +WVEKAGRD+ +I R GKT SHLWQSRKERLA
Sbjct: 109 KFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLA 226
BLAST of mRNA_E-fasciculatus_F_contig11863.1459.1 vs. uniprot
Match: A0A6H5JLM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM8_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.930e-44 Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 2
Query: 1193 QFRAGDIGLRERRQRYRTVVDEDD-FKSDCG-ECEDRAHVVVECSLYKA-KEVYMAELGKMEGRYREMFEAWNREDKTVDVLGHYKWVEKAGRDVGKIGRQGKTVFSHLWQSRKERLA 1537
+FR GDIGLRERR+R+RTV +EDD FK DCG ECEDR HVV EC LYK +EVY+ ELGK++G YREMFEAWNRE++TV VLGH +WVEKAGRD+ +I R GKT SHLWQSRKERLA
Sbjct: 244 KFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLA 361
BLAST of mRNA_E-fasciculatus_F_contig11863.1459.1 vs. uniprot
Match: A0A6H5L729_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L729_9PHAE) HSP 1 Score: 169 bits (427), Expect = 2.840e-44 Identity = 91/138 (65.94%), Postives = 106/138 (76.81%), Query Frame = 2
Query: 1142 GQGVPTWTNGRRD---KARRQFRAGDIGLRERRQRYRTVVDEDD-FKSDCG-ECEDRAHVVVECSLYKA-KEVYMAELGKMEGRYREMFEAWNREDKTVDVLGHYKWVEKAGRDVGKIGRQGKTVFSHLWQSRKERLA 1537
G G + NG D K + +FR GDIGLRE R+R+RTV +EDD FK DCG ECEDR HVV EC LYK +EVY+ ELGK++G YREMFEAWNRE++TV VLGH +WVEKAGRD+ +I R GKT SHLWQSRKERLA
Sbjct: 153 GIGPKDYLNGPMDAGTKLKVKFRTGDIGLRECRRRHRTVDNEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLA 290
BLAST of mRNA_E-fasciculatus_F_contig11863.1459.1 vs. uniprot
Match: A0A6H5KET1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KET1_9PHAE) HSP 1 Score: 170 bits (431), Expect = 3.290e-44 Identity = 85/118 (72.03%), Postives = 99/118 (83.90%), Query Frame = 2
Query: 1193 QFRAGDIGLRERRQRYRTVVDEDD-FKSDCG-ECEDRAHVVVECSLYKA-KEVYMAELGKMEGRYREMFEAWNREDKTVDVLGHYKWVEKAGRDVGKIGRQGKTVFSHLWQSRKERLA 1537
+FR GDIGLRERR+R+RTV +EDD FK DCG ECEDR HVV EC LYK +EVY+ ELGK++G YREMFEAWNRE++TV V+GH +WVEKAGRD+ +I R GKT SHLWQSRKERLA
Sbjct: 212 KFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLA 329
BLAST of mRNA_E-fasciculatus_F_contig11863.1459.1 vs. uniprot
Match: A0A6H5JB24_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB24_9PHAE) HSP 1 Score: 172 bits (436), Expect = 5.400e-44 Identity = 86/118 (72.88%), Postives = 100/118 (84.75%), Query Frame = 2
Query: 1193 QFRAGDIGLRERRQRYRTVVDEDD-FKSDCG-ECEDRAHVVVECSLYKA-KEVYMAELGKMEGRYREMFEAWNREDKTVDVLGHYKWVEKAGRDVGKIGRQGKTVFSHLWQSRKERLA 1537
+FR GDIGLRERR+R+RTV +EDD FK DCG ECEDR HVV EC LYK +EVY+ ELGK++G YREMFEAWNRE++TV VLGH +WVEKAGRD+ +I R GKT+ SHLWQSRKERLA
Sbjct: 372 KFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTLLSHLWQSRKERLA 489
BLAST of mRNA_E-fasciculatus_F_contig11863.1459.1 vs. uniprot
Match: A0A6H5LRL5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRL5_9PHAE) HSP 1 Score: 171 bits (434), Expect = 7.410e-44 Identity = 86/118 (72.88%), Postives = 99/118 (83.90%), Query Frame = 2
Query: 1193 QFRAGDIGLRERRQRYRTVVDEDD-FKSDCG-ECEDRAHVVVECSLYKA-KEVYMAELGKMEGRYREMFEAWNREDKTVDVLGHYKWVEKAGRDVGKIGRQGKTVFSHLWQSRKERLA 1537
+FR GDIGLRERR+R+RTV +EDD FK DCG ECEDR HVV EC LYK +EVY+ ELGK++G YREMFEAWNRE++TV VLGH +WVEKAGRD+ +I R GKT SHLWQSRKERLA
Sbjct: 302 KFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLA 419 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11863.1459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11863.1459.1 >prot_E-fasciculatus_F_contig11863.1459.1 ID=prot_E-fasciculatus_F_contig11863.1459.1|Name=mRNA_E-fasciculatus_F_contig11863.1459.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=159bp MISEYARWGFTAFFSSHFLISLLLDAQALSVGDKLFPQVLKGIMEFHVETback to top mRNA from alignment at E-fasciculatus_F_contig11863:36..1892- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11863.1459.1 ID=mRNA_E-fasciculatus_F_contig11863.1459.1|Name=mRNA_E-fasciculatus_F_contig11863.1459.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1857bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11863:36..1892- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11863:36..1892- >mRNA_E-fasciculatus_F_contig11863.1459.1 ID=mRNA_E-fasciculatus_F_contig11863.1459.1|Name=mRNA_E-fasciculatus_F_contig11863.1459.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=954bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11863:36..1892- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |