mRNA_E-fasciculatus_F_contig1175.1383.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1175.1383.1 vs. uniprot
Match: D8LRI8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI8_ECTSI) HSP 1 Score: 1286 bits (3327), Expect = 0.000e+0 Identity = 673/814 (82.68%), Postives = 715/814 (87.84%), Query Frame = 3
Query: 309 RRWAVCAAKVKAGALRAKTFVTSSDSESSNXXXXXXHESEGGSDRASDSGGRDCGSRPHPLKRAPSVSFPGTLDLATQAQAPETPDQEAELDVDCPRPCGDAVTILNGATSTEGRRFITVRDRPDQVARDDVEANTDVEADAPSGANVVXXXXXXXXADTPLPSPPDATREALVDPLSLAEGAGEGXXXXXXXXXXDEEDSTVWELSSSSDESNALSPTWPRSTSRARVRWRDGGRENEHGHANYPLRAVSSAQQVLPESPGSYIARMGRILAHVRQTTSPSASATTSPVPDSRRKAFGRPFGGSSSGTNELAAGGQTTVGGETVAPVEDCREDSETVEQQQPGISAVDRTETAPLEGLRIDHRRLEGAVEMNQKPAAPDQRRWQGGRVLEGAGLGEEHDAIIYHNEQPESRGDLELMIAAVSAMVGMIVPEQYQWVLWIGCCAVTVWFPLRRHFRWLLWWRSDASAWQQPSREVRID--DCLHPPPPYYDMHVDGMDVGGAGVVVAAGGPPTPSHDILDSRAGTPMFRGESEKSMKAGEGEGESTGVLGGGIKPEEELEERYRQLLAGLSKTELEFAESAGDEEKTRLLHQCLEYANYDMAGAIKVCSTFCQFRLKEGWDLVLSARELETPLRSRVHTLTTNRDRTGRGMLTFSPGKLDMEKAPPAAYHKMLCYVLQEVLKEEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVISIALSIAMPLLSAKMRARVEFVTDKKASDGSFTKELADPSSIPMELGIKGTWTGSRDFWDEWVGRRVAEHGSER 2744
RRWAVCAAKVKAGALRAKTFVTSSDSES N HE EGGS++ SDSG RDCGSRPH LKRAPSVSFP TLDLA QAQA E PD EAEL V PRPCGDAVTILNGATSTEG R I VRDRPDQ ARDDVEA+TDV A+ SG N+ ADTPL SPPDATREALVDPLSLAE AGEG +EEDST+WELSSSS+ESNALSPTWPRSTSR+RVR +DGGREN HGHAN P RA+SSAQQVLPESPGSY+ARM RILA VRQTTSPSASAT S PD+ RKAFGRP GGSSSG+NE+AAGG+ TVGGETVAPVEDC +DSET E QQPGISAVD TET+P EGL I H+RLEGAV MNQKPAAPDQ+RWQGGRVLEGA LGEEH ++YH EQPESRGD+ELMIAAVS MVGMIVPEQYQW+LWIGCCAVTVWFPLRRH W SDASAWQQPS EV ID D L PPPPYYD+HVDG+DVGGAGV++ AG PPTPSH+ LD RAGTPMFRGESEKS+KAGEG GES+GVLGGG K EEELEERY+QLLAGLSKTELEF ESAGDEEKTRLLHQCLEYANYDMAGAIKVCSTFC+FRL+EGWDLVLSA ELETPLRSRVHTLTTNRDRTGRG+LTFSPGKLDM+KAPPAAYHKMLCYVLQEV+K+EELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVI +AL IAMPLLSAKMRARVEFVTD++ASDGSFTKELADPSSIP+ELGIKGTWTGSRDFWDEWV RRV EHGSER
Sbjct: 32 RRWAVCAAKVKAGALRAKTFVTSSDSESCNGSSESEHEREGGSNKGSDSGVRDCGSRPHSLKRAPSVSFPCTLDLAKQAQAREIPDSEAELGVVGPRPCGDAVTILNGATSTEGGRDIIVRDRPDQAARDDVEADTDVXAEVDSGPNI---GGGGGGADTPLRSPPDATREALVDPLSLAEEAGEGEGAG------EEEDSTLWELSSSSEESNALSPTWPRSTSRSRVRRKDGGRENGHGHANSPPRAISSAQQVLPESPGSYVARMSRILAQVRQTTSPSASATNSQAPDNGRKAFGRPLGGSSSGSNEIAAGGENTVGGETVAPVEDCLKDSETSEHQQPGISAVDITETSPSEGLGIGHQRLEGAVGMNQKPAAPDQKRWQGGRVLEGAELGEEHHGLVYHKEQPESRGDVELMIAAVSVMVGMIVPEQYQWILWIGCCAVTVWFPLRRHXXXXXXWGSDASAWQQPSLEVLIDAGDGLDPPPPYYDIHVDGVDVGGAGVLLKAGEPPTPSHEKLDGRAGTPMFRGESEKSIKAGEGVGESSGVLGGGGKHEEELEERYQQLLAGLSKTELEFVESAGDEEKTRLLHQCLEYANYDMAGAIKVCSTFCKFRLQEGWDLVLSAPELETPLRSRVHTLTTNRDRTGRGVLTFSPGKLDMDKAPPAAYHKMLCYVLQEVIKDEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVIGMALKIAMPLLSAKMRARVEFVTDERASDGSFTKELADPSSIPVELGIKGTWTGSRDFWDEWVVRRVDEHGSER 836
BLAST of mRNA_E-fasciculatus_F_contig1175.1383.1 vs. uniprot
Match: A0A6H5JJW0_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW0_9PHAE) HSP 1 Score: 1255 bits (3247), Expect = 0.000e+0 Identity = 667/877 (76.05%), Postives = 717/877 (81.76%), Query Frame = 3
Query: 141 VTDHADTARSERRVRVESPRCGGAVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRWAVCAAKVKAGALRAKTFVTSSDSESSNXXXXXXHESEGGSDRASDSGGRDCGSRPHPLKRAPSVSFPGTLDLATQAQAPETPDQEAELDVDCPRPCGDAVTILNGATSTEGRRFITVRDRPDQVARDDVEANTDVEADAPSGANVVXXXXXXXXADTPLPSPPDATREALVDPLSLAEGAGEGXXXXXXXXXXDEEDSTVWELSSSSDESNALSPTWPRSTSRARVRWRDGGRENEHGHANYPLRAVSSAQQVLPESPGSYIARMGRILAHVRQTTSPSASATTSPVPDSRRKAFGRPFGGSSSGTNELAAGGQTTVGGETVAPVEDCREDSETVEQQQPGISAVDRTETAPLEGLRIDHRRLEGAVEMNQKPAAPDQRRWQGGRVLEGAGLGEEHDAIIYHNEQPESRGDLELMIAAVSAMVGMIVPEQYQWVLWIGCCAVTVWFPLRRHFRWLLWWRSDASAWQQPSREVRID--DCLHPPPPY----YDMHVDGMDVGGAGVVVAAGGPPTPSHDILDSRAGTPMFRGESEKSMKAGEGEGESTGVLGGGIKPEEELEERYRQLLAGLSKTELEFAESAGDEEKTRLLHQCLEYANYDMAGAIKVCSTFCQFRLKEGWDLVLSARELETPLRSRVHTLTTNRDRTGRGMLTFSPGKLDMEKAPPAAYHKMLCYVLQEVLKEEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVISIALSIAMPLLSAKMRAR---VEFVTDKKASDGSFTKELADPSSIPMELGIKGTWTGSRDFWDEWVGRRVAEHGSER 2744
V DHADT RSERRV ES GG V RRWAVCAAKVKAG LRA TFVTSSDSES + HE EG D+ SDSG +DCGSRPH LKRAPS+SFP TLDLA Q QA E PD AE V CPRPCGDAVTILNGATSTEG R I VRDRPDQ ARDDVEA+TD SGAN+ ADTP+ SPPDAT +ALVDPLSLA AGEG +EED +WELSSSS+E+NALSPT PRSTSR+RVR RDGGREN HGH P RA+SSAQQVLPESPGSY+ARM RILAHVRQTTSPSASAT SP PDS RK FGRP GGSSSG+NE+A GG+TTVGGETVAPVEDC EDSE VEQQQPGISAVDRTET+P EGL I+HRRL GAV +NQKP APDQ+RWQGGRVLEGA LGEEH ++YH +QPE+RGDLE+MIAAVSAMVGM VP+QYQW+LWIGCCA+TVWFPLRRHFRW L DASAWQQPSREV ID D L PPPPY D+HVDG+DVGG GV+ AGGPP PSH+ +D R GTPMFRG+SEKSM+AGEG GES+GVLGGG KPEEELEERY+QLLAGLSK ELEF ESAGDEEKTRLL QCLEYANYDMAGA+KVCSTFC+FRL+EGWDLVLSARELETPLRSRVHTLTTNRDRTGRG+LTFSPGKLDM+KAPPAAYHKMLCYVLQEV+K++ELQTKGLVLLVDARGVGFGLLRRFTL DYKRGLRMLGGAFPAKVKAIRILHLNRVI ALSIAMPLLSAKMRAR VEFVTD++ASDGSFTKELADPSSIP+ELGIKGTWTGS DFWDEWVGRRVAEH SER
Sbjct: 9 VLDHADTTRSERRVIEESIGRGGISAVRAGSAAMFSASSSVRSDTTKTTKTGSERKRRWAVCAAKVKAGVLRANTFVTSSDSESCSGSSESEHEREGDIDKGSDSGVQDCGSRPHSLKRAPSMSFPCTLDLAAQVQAREMPDSGAEPSVVCPRPCGDAVTILNGATSTEGGRVIIVRDRPDQAARDDVEADTDXXXXXXSGANI-----GGGAADTPVCSPPDATVDALVDPLSLAREAGEGEGAG------EEEDYALWELSSSSEENNALSPTRPRSTSRSRVRRRDGGRENGHGHDKSPPRAISSAQQVLPESPGSYVARMSRILAHVRQTTSPSASATNSPAPDSGRKVFGRPLGGSSSGSNEIAVGGETTVGGETVAPVEDCLEDSEMVEQQQPGISAVDRTETSPSEGLGIEHRRLGGAVGINQKPTAPDQKRWQGGRVLEGAKLGEEHRGLVYHEQQPENRGDLEVMIAAVSAMVGMTVPKQYQWILWIGCCAITVWFPLRRHFRWRLRRGPDASAWQQPSREVLIDAGDGLDPPPPYDDIDIDVHVDGVDVGGTGVLPTAGGPPAPSHENIDGRTGTPMFRGDSEKSMEAGEGVGESSGVLGGGEKPEEELEERYQQLLAGLSKKELEFVESAGDEEKTRLLQQCLEYANYDMAGAVKVCSTFCKFRLQEGWDLVLSARELETPLRSRVHTLTTNRDRTGRGVLTFSPGKLDMDKAPPAAYHKMLCYVLQEVIKDKELQTKGLVLLVDARGVGFGLLRRFTLVDYKRGLRMLGGAFPAKVKAIRILHLNRVIRFALSIAMPLLSAKMRARQCKVEFVTDERASDGSFTKELADPSSIPVELGIKGTWTGSHDFWDEWVGRRVAEHESER 874
BLAST of mRNA_E-fasciculatus_F_contig1175.1383.1 vs. uniprot
Match: A0A7S1E7J6_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E7J6_HEMAN) HSP 1 Score: 108 bits (270), Expect = 6.350e-22 Identity = 71/213 (33.33%), Postives = 108/213 (50.70%), Query Frame = 3
Query: 2079 CLEYANYDMAGAIKVCSTFCQFRLKEGWDLVLSARELETPLRSRVHTLTTNRDRTGRGMLTFSPGKLDMEKAPPAAY---HKMLCYVLQEVLKEEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVISIALSIAMPLLSAKMRARVEFVTD-----KKASDGSFTKELADPSSIPMELGIKGTWTGSRD 2693
CL Y + A +V + F +FR ++GW LSA L+ L S VH L DR GRG++ ++ K+ + A +M +L+ L + +G+V +VDARGVG +L RF++ D RG+ M +FP K+K I ++ L + S+ + LLSAK+R RV T ++ G+ KEL +EL KG W S +
Sbjct: 92 CLRVWQYSVHDAARVAANFARFRTRQGWPYRLSASSLQRELLSEVHWLLPGEDRAGRGVIVYNAHKIREAVSAGATVCGLQQMGALLLEVALGRPGVPERGVVAVVDARGVGLDILGRFSVTDMGRGVAMWKDSFPCKIKKIHVIGLPWPLQATCSLILGLLSAKLRGRVSVETGTTRLAEEVGSGNLPKELGGE----LELDWKG-WVMSSE 299
BLAST of mRNA_E-fasciculatus_F_contig1175.1383.1 vs. uniprot
Match: A0A1Q9F3T5_SYMMI (Alpha-tocopherol transfer protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9F3T5_SYMMI) HSP 1 Score: 73.9 bits (180), Expect = 6.510e-11 Identity = 50/179 (27.93%), Postives = 84/179 (46.93%), Query Frame = 3
Query: 2148 LKEGWDLVLSARELETPLRSRVHTLTTNR------DRTGRGMLTFSPGKLDMEKAPPAAYHKMLCYVLQEVLKEEELQTKGLVLLVDARGVGFGLLRR-FTLADYKRGLRMLGGAFPAKVKAIRILHLNRVISIALSIAMPLLSAKMRARVEFVTDKKASDGSFTKELADPSSIPMELG 2663
++ W + + A E+ L++ +H L + + L F+ KLD E P Y K+ ++++ ++QT+G+ L++D RGV F L L D KRGL GAFP +++ I IL + S+ L+ K+R R++FV K ++ D +P LG
Sbjct: 2 VRSEWAMSIPASEVSRALKTGLHWLLPGKKDSKDPNEFAAACLVFNMAKLDPEACPIEEYQKLSLFLIERATDTLDVQTRGVALIIDFRGVQFTKLWSVLRLEDIKRGLGCWVGAFPCRLRRIWILDAPLPVRALTSLVKKFLTPKVRNRIDFVAPKDLQ--RIREDFVDCIVLPESLG 178
BLAST of mRNA_E-fasciculatus_F_contig1175.1383.1 vs. uniprot
Match: A0A812Y8M9_9DINO (TTPA protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812Y8M9_9DINO) HSP 1 Score: 73.6 bits (179), Expect = 1.160e-9 Identity = 50/175 (28.57%), Postives = 81/175 (46.29%), Query Frame = 3
Query: 2160 WDLVLSARELETPLRSRVHTLTTNR------DRTGRGMLTFSPGKLDMEKAPPAAYHKMLCYVLQEVLKEEELQTKGLVLLVDARGVGFGLLRR-FTLADYKRGLRMLGGAFPAKVKAIRILHLNRVISIALSIAMPLLSAKMRARVEFVTDKKASDGSFTKELADPSSIPMELG 2663
W + + A E+ L++ +H L + + L F+ KLD E P Y K+ ++++ E+QT+G+ L++D RGV F L L D KRGL GAFP +++ I IL + + L+ K+R R++FV K ++ D +P LG
Sbjct: 225 WAMSIPASEVSRALKTGLHWLLPGKKDSKDPNEFAAACLVFNMAKLDPEACPIEEYQKLSLFLIERATDSLEVQTRGVALIIDFRGVQFTKLWSVLRLEDIKRGLGCWVGAFPCRLRRIWILDAPLPVRALTGLVKKFLTPKVRNRIDFVAPKDLQ--RIREDFVDCIVVPDSLG 397
BLAST of mRNA_E-fasciculatus_F_contig1175.1383.1 vs. uniprot
Match: UPI001E1DA0C0 (alpha-tocopherol transfer protein-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA0C0) HSP 1 Score: 71.2 bits (173), Expect = 2.480e-9 Identity = 45/155 (29.03%), Postives = 75/155 (48.39%), Query Frame = 3
Query: 2199 LRSRVHTLTTNRDRTGRGMLTFSPGKLDMEKAPPAAYHKMLCYVLQEVLKEEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVISIALSIAMPLLSAKMRARVEFVTDKKASDGSFTKELADPSSIPMELG 2663
L V + RD+ GR +L F PG+ D K P K L +++++EE Q G+++L D +GVGFG + T KR + +L FP ++K + ++ V I ++A + K+ R+ V K ++ E D +P+E G
Sbjct: 105 LEDGVTGVLPQRDKFGRRVLVFRPGRWDPSKYPVPHVFKTNFMTLSKLIEDEETQVSGIIMLADLKGVGFGHATQMTPFFAKRIVSLLQDTFPMRLKGVHYVNEPTVFDIVFAVARQFMRKKLLERIH-VHGKNMNE---LAEFIDLEHLPVEYG 255
BLAST of mRNA_E-fasciculatus_F_contig1175.1383.1 vs. uniprot
Match: UPI001E1DA7B2 (alpha-tocopherol transfer protein-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA7B2) HSP 1 Score: 68.2 bits (165), Expect = 2.390e-8 Identity = 52/174 (29.89%), Postives = 81/174 (46.55%), Query Frame = 3
Query: 2229 NRDRTGRGMLTFSPGKLDMEKAPPAAYHKMLCYVLQEVLKEEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVISIALSIAMPLLSAKMRARVEFVTDKKASDGSFTKELA---DPSSIPMELGIKGTWTGSRDFWDEWVGRRVAEHGSE 2741
NRD+ GR ++ F PGK D K P K L + +++EE Q KG+V++ D G+GFG + + KR + +L +FP + KA+ +++ V +I +S + DK G +ELA D +P E G G S + W E + AE +E
Sbjct: 113 NRDKLGRRVMVFRPGKWDPSKFPITDMFKTNFMTLYKFIEDEETQIKGVVVIFDMNGMGFGQITHLSPFFAKRIVALLQESFPMQFKAVHLVNEPAVFDYLFAILRHFMSQE-------TIDKMNVHGHKLEELAEYFDVDHLPAEYGGNGP-KFSNEEWMETLLECDAEFDAE 278
BLAST of mRNA_E-fasciculatus_F_contig1175.1383.1 vs. uniprot
Match: A0A8C6K5R2_NOTFU (CRAL-TRIO domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6K5R2_NOTFU) HSP 1 Score: 65.1 bits (157), Expect = 1.490e-7 Identity = 58/222 (26.13%), Postives = 102/222 (45.95%), Query Frame = 3
Query: 2049 DEEKTRLLHQCLEYANYDMAGAIKVCST----FCQFRLKEGWDLV--LSARELETPLRSRVHTLTTNRDRTGRGMLTFSPGKLDMEKAPPAAYHKMLCYVLQEVLKEEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVISIALSIAMPLLSAKMRARV------------EFVTDKKASDGSFTKELADPSSIPMEL 2660
+EE+ R H+ L +D G +VCS + +FR KE +L L+ + + + + + +RDR G +L F+ D+E+ + C +L+++L+ EE Q G VL+ + +G A+ K+ + ML +FPA+ KA+ ++H + ++ P + AK+ RV EF D SD +AD +I +L
Sbjct: 34 EEEEQRPQHRTL----WDTMGK-RVCSVDPLGYVRFR-KEYPELFENLTPEAVRSTIEAGYPVVLPSRDRYGHVVLLFNIDNWDLEEITFDEVLRAYCVILEKLLENEETQINGFVLIENFKGFTMQHASGIKTAELKKMVDMLQDSFPARFKAVHVIHQPWYFTTTYNVVKPFMKAKLLERVFVHGEELENYFKEFEADILPSDFDGRAPVADYQAIATQL 249
BLAST of mRNA_E-fasciculatus_F_contig1175.1383.1 vs. uniprot
Match: UPI001E1D2ABC (alpha-tocopherol transfer protein-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2ABC) HSP 1 Score: 65.5 bits (158), Expect = 2.140e-7 Identity = 42/145 (28.97%), Postives = 69/145 (47.59%), Query Frame = 3
Query: 2229 NRDRTGRGMLTFSPGKLDMEKAPPAAYHKMLCYVLQEVLKEEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVISIALSIAMPLLSAKMRARVEFVTDKKASDGSFTKELADPSSIPMELG 2663
+RDR GR ++ F PGK D K + L ++++EEE Q G++LL D +G+G+ RRF +R + +L +FP + K I ++ V + ++ P + K+ R+ F K E D +P E G
Sbjct: 117 HRDRQGRRVMIFRPGKWDPTKYAIDDIFRANFISLTKLVEEEEAQINGIILLADLKGMGWKQTRRFKPLLARRLIGLLQDSFPMRFKGIHYVNEPVVFDMVFAVIRPFMKQKILDRIHFHGSKYEE----LSEFIDTQYLPSEYG 257
BLAST of mRNA_E-fasciculatus_F_contig1175.1383.1 vs. uniprot
Match: A0A2I4AND9_9TELE (retinaldehyde-binding protein 1-like isoform X1 n=10 Tax=Aplocheiloidei TaxID=45443 RepID=A0A2I4AND9_9TELE) HSP 1 Score: 64.7 bits (156), Expect = 3.750e-7 Identity = 52/212 (24.53%), Postives = 97/212 (45.75%), Query Frame = 3
Query: 2067 LLHQCLEYANYDMAGAIKVCSTFCQFRLKEGWDLV--LSARELETPLRSRVHTLTTNRDRTGRGMLTFSPGKLDMEKAPPAAYHKMLCYVLQEVLKEEELQTKGLVLLVDARGVGFGLLRRFTLADYKRGLRMLGGAFPAKVKAIRILHLNRVISIALSIAMPLLSAKMRARV------------EFVTDKKASDGSFTKELADPSSIPMEL 2660
LL + L +++ A ++ + +FR +E +L L+ + + + + + RDR GR +L F+ D+E+ + C +L+++L+ EE Q G VL+ + +G A+ K+ + ML +FPA+ KA+ ++H + ++ P + AK+ RV EF D SD +AD +I +L
Sbjct: 95 LLLRFLRARKFEVVRAHELMKGYVRFR-REYPELFENLTPEAVRSTIEAGYPVVLPTRDRFGRVVLLFNINNWDLEEITFDEVLRAYCVILEKLLESEETQINGFVLIENFKGFTMQHASGIKTAELKKMVDMLQDSFPARFKAVHVIHQPWYFTTTYNVVKPFMKAKLLERVFVHGDELESYFKEFDVDILPSDFDGKAPVADYQAIATQL 305 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1175.1383.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1175.1383.1 >prot_E-fasciculatus_F_contig1175.1383.1 ID=prot_E-fasciculatus_F_contig1175.1383.1|Name=mRNA_E-fasciculatus_F_contig1175.1383.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=886bp MVYINNTGNHPKPSAAVTDHADTARSERRVRVESPRCGGAVVVQEGSAAMback to top mRNA from alignment at E-fasciculatus_F_contig1175:6501..17433+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1175.1383.1 ID=mRNA_E-fasciculatus_F_contig1175.1383.1|Name=mRNA_E-fasciculatus_F_contig1175.1383.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=10933bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1175:6501..17433+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1175:6501..17433+ >mRNA_E-fasciculatus_F_contig1175.1383.1 ID=mRNA_E-fasciculatus_F_contig1175.1383.1|Name=mRNA_E-fasciculatus_F_contig1175.1383.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=5316bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1175:6501..17433+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |