prot_E-fasciculatus_F_contig1175.1382.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1175.1382.1
Unique Nameprot_E-fasciculatus_F_contig1175.1382.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length61
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1175.1382.1 vs. uniprot
Match: D8LRI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI7_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 3.200e-25
Identity = 56/60 (93.33%), Postives = 56/60 (93.33%), Query Frame = 0 
Query:    1 MGSKFSSAQRSKAHQGETTKDYEERKKSRQQRLKESEAKWKAAQEKTQSSSPPPNRGGKR 60
            MGSK SSAQRSK HQ ETTKDYEERKKSRQQRLKESEAKWKAAQEKTQSS PPPNRGGKR
Sbjct:    1 MGSKLSSAQRSKTHQAETTKDYEERKKSRQQRLKESEAKWKAAQEKTQSS-PPPNRGGKR 59
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1175.1382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRI7_ECTSI3.200e-2593.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..39
IPR015157Translation machinery associated TMA7PFAMPF09072TMA7coord: 18..58
e-value: 4.2E-4
score: 21.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1175contigE-fasciculatus_F_contig1175:3656..6380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1175.1382.1mRNA_E-fasciculatus_F_contig1175.1382.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1175 3656..6380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1175.1382.1 ID=prot_E-fasciculatus_F_contig1175.1382.1|Name=mRNA_E-fasciculatus_F_contig1175.1382.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=61bp
MGSKFSSAQRSKAHQGETTKDYEERKKSRQQRLKESEAKWKAAQEKTQSS
SPPPNRGGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015157TMA7