mRNA_E-fasciculatus_F_contig11732.1371.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11732.1371.1 vs. uniprot
Match: D7FNQ1_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ1_ECTSI) HSP 1 Score: 457 bits (1175), Expect = 1.920e-159 Identity = 237/252 (94.05%), Postives = 242/252 (96.03%), Query Frame = 2
Query: 17 MDAPVFPYQETRAGDFSALRHWLSQGGTIDSPLLRSVAETWTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVAARYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTSSSFEAPYAATALDMAEMAGFDDAATLLRSRALAGEEGGGAARR-KTLASWLGVLGCEEFFGRFLRAGYDDLRFMASQGLTEADLDCVGVPGEKLGLRKKLLAMHGVEAFLNADG 769
MDAPVFPYQETR GDFSALRHWLSQGGTID+PLLRSVAETWTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVA+RYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLL AGAD SSSFEAPYAA ALDMAEMAGFDDAATLLRSRALAGE+GG A RR KTLASWLGVLGC EF GRFLRAGYDDL+FMASQGLTEADLDCVGVPG+KLGLRKKLLAMHGVE FLNADG
Sbjct: 1 MDAPVFPYQETRGGDFSALRHWLSQGGTIDAPLLRSVAETWTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVASRYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLEAGADASSSFEAPYAAKALDMAEMAGFDDAATLLRSRALAGEDGGEAVRRRKTLASWLGVLGCREFLGRFLRAGYDDLQFMASQGLTEADLDCVGVPGDKLGLRKKLLAMHGVEGFLNADG 252
BLAST of mRNA_E-fasciculatus_F_contig11732.1371.1 vs. uniprot
Match: A0A482UJW8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UJW8_9ARCH) HSP 1 Score: 62.4 bits (150), Expect = 7.780e-9 Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 2
Query: 584 VLGCEEFFGRFLRAGYDDLRFMASQGLTEADLDCVGVPGEKLGLRKKLLAMHGVEAF 754
LG E+ RFL AGYD L F+ + GL++ DLDC+GVP K+GLR+K+ +HG++ F
Sbjct: 9 TLGGSEYLQRFLDAGYD-LPFIHTHGLSDVDLDCIGVPVNKMGLRRKMSKLHGLDRF 64
BLAST of mRNA_E-fasciculatus_F_contig11732.1371.1 vs. uniprot
Match: A0A3N2Q9Q2_9PEZI (Glycerophosphocholine phosphodiesterase n=1 Tax=Sodiomyces alkalinus F11 TaxID=1314773 RepID=A0A3N2Q9Q2_9PEZI) HSP 1 Score: 60.8 bits (146), Expect = 1.650e-6 Identity = 44/109 (40.37%), Postives = 61/109 (55.96%), Query Frame = 2
Query: 119 RSVAETWTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVAARYGHAGVAAVLL----ELGAVVD-ARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTS 430
+ VA++ LALA +V+ +V+ G + A + LHVAARYGHAG A VLL E+ A VD A + +TPL AA +GHL +++L+ AGAD S
Sbjct: 449 KHVAKSGAVLALATKANYEIIVQMLVDAG-----VDVNWRDTAGETALHVAARYGHAGCAEVLLRGTDEMKADVDIAESVYSWTPLHVAAVDGHLPVVQLLVNAGADVS 552
BLAST of mRNA_E-fasciculatus_F_contig11732.1371.1 vs. uniprot
Match: A0A3N4L9E7_9PEZI (Ankyrin n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4L9E7_9PEZI) HSP 1 Score: 57.8 bits (138), Expect = 4.240e-6 Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = 2
Query: 128 AETWTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLAS--SSPLHVAARYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTS 430
AE WTPLA A GR +L + +V G +AQ + L S +H+AA YG +LL++GA ++ R++FG T L A HL +++L G GAD +
Sbjct: 6 AEGWTPLASAAFNGRKDLCQFLVGKGCTLCLNAAQKEQLKPNFSCRVHLAAVYGDKTTLQLLLDMGADINERNSFGETALLQAVCFNHLSCVKLLTGRGADAT 108
BLAST of mRNA_E-fasciculatus_F_contig11732.1371.1 vs. uniprot
Match: UPI000359B1AA (myotrophin n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359B1AA) HSP 1 Score: 54.7 bits (130), Expect = 8.110e-6 Identity = 37/93 (39.78%), Postives = 49/93 (52.69%), Query Frame = 2
Query: 236 KVLASSSPLHVAARYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTSSSFEAPYAATALDMAEMAGFDDAATLLR 514
K + PLH AA YG V L+ GA+V+A D +G TPL A GH +++LL GAD + +P AT +D AE DD LL+
Sbjct: 34 KAITGRLPLHYAADYGQTEVINYLISKGALVNAPDKYGITPLLSAIFEGHTDCVKLLLEKGADKTG--RSPDGATYIDCAEK---DDIKALLK 121
BLAST of mRNA_E-fasciculatus_F_contig11732.1371.1 vs. uniprot
Match: A0A507FK98_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FK98_9FUNG) HSP 1 Score: 58.5 bits (140), Expect = 9.120e-6 Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 2
Query: 134 TWTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVAARYGHAGVAAVLLELGAVVDARDTF-GFTPLCYAAGNGHLKTIEVLLGAG 418
T + L++AC G E+ ++ G S L SPLH+AAR G A + ++L++ G VD D F G+TP+ YAA GH++ +E+L+GAG
Sbjct: 457 TSSSLSIACEHGHTEIATLLLSKGA---SLVLNNDGL---SPLHLAARAGXADLLSLLIKHGGDVDLVDVFQGWTPVFYAATEGHIRCVELLIGAG 546
BLAST of mRNA_E-fasciculatus_F_contig11732.1371.1 vs. uniprot
Match: A0A485KR53_9STRA (Aste57867_10744 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KR53_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.030e-5 Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 2
Query: 137 WTPLALACAEGRVELVRAIVEIG-----------------GARPSFSAQTKVLASSSPLHVAARYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTSSSFEAPYAATALDM 472
WTPLA+AC GR+E+V+ ++ IG G +A K + ++PLH A HA VA LL G V+ D+ G L +G+ I+++L GAD S+ + Y T LD+
Sbjct: 100 WTPLAVACFHGRLEIVQYLLGIGAADFYAQMKRQAAIKTSGGEKVTTAAKKPIQQNTPLHWACYKSHAQVACALLAWGFSVEDADSCGNRALHLVCSSGNFDMIQIILAHGADVSA--KNMYGNTPLDL 226
BLAST of mRNA_E-fasciculatus_F_contig11732.1371.1 vs. uniprot
Match: A0A7R8WM28_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WM28_9CRUS) HSP 1 Score: 57.8 bits (138), Expect = 1.450e-5 Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 2
Query: 140 TPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVAARYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGAD 424
TPL LA GR +V ++ GA P+ T + +SPLH A A A +L+ GAVVDA+D G TPL +A G+GH +EVL+ GA+
Sbjct: 181 TPLLLATLNGRHSVVEVLLA-HGADPNI---TNRVEETSPLHQAKS---AETAELLIAKGAVVDAKDKSGETPLFFATGSGHHSVVEVLIANGAE 268
BLAST of mRNA_E-fasciculatus_F_contig11732.1371.1 vs. uniprot
Match: A0A091BEW2_9GAMM (Uncharacterized protein n=1 Tax=Arenimonas composti TR7-09 = DSM 18010 TaxID=1121013 RepID=A0A091BEW2_9GAMM) HSP 1 Score: 57.8 bits (138), Expect = 1.610e-5 Identity = 67/214 (31.31%), Postives = 91/214 (42.52%), Query Frame = 2
Query: 20 DAPVFPYQETRAGDFSALRHWLSQGGTIDS------PLLRSVAETWTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVAARYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTSSSFEAPYAATALDMAEMAGFDDAA---TLLRSRALAGEEGGGAARRKTLASWLGVLGCEEFFGRFLRAGYD 634
D P GD LR +++G +++ PLL + ++W GR E V ++ G A+ ++PLH AAR A VAA+LL+ GAV+DA + GF+PL A G+ + LL GA P +A AG DDAA LLR +A +G G R L G E G L AG D
Sbjct: 268 DQRTLPMLAALLGDLRLLRELIARGVDLNAEHGGLTPLLVATRDSW--------HGRPEAVMTLLTNGA-----DARHPDADGNTPLHHAARSTDAAVAALLLDAGAVLDALNGEGFSPLGIACAAGNWRLARFLLERGAKPEPKDGQPAL-----LAAAAGDDDAAGVQLLLRHKAKV--DGRGRGHRSALMVACAA-GNAEIVGELLDAGAD 460
BLAST of mRNA_E-fasciculatus_F_contig11732.1371.1 vs. uniprot
Match: A0A2D5Z3C9_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2D5Z3C9_9BACT) HSP 1 Score: 56.2 bits (134), Expect = 4.750e-5 Identity = 46/125 (36.80%), Postives = 61/125 (48.80%), Query Frame = 2
Query: 137 WTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVAARYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTSSSFEAPYAATALDMAEMAGFDDAATLL 511
WTPLA+A AEG V++++ ++ GA P +T AS + AA G A V G + G+TPL AAGNGH LL GA S+ E + TALD+A G + LL
Sbjct: 559 WTPLAIAAAEGHVDVIKVLLAPKGAPPKAIRRTVSAASGAD---AATVG----AMVARFRGPSPEQIGPGGWTPLMQAAGNGHAAATRALLEHGATLSA--ENNWGRTALDIARQRGHQEVVALL 674 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11732.1371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11732.1371.1 >prot_E-fasciculatus_F_contig11732.1371.1 ID=prot_E-fasciculatus_F_contig11732.1371.1|Name=mRNA_E-fasciculatus_F_contig11732.1371.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=320bp MDAPVFPYQETRAGDFSALRHWLSQGGTIDSPLLRSVAETWTPLALACAEback to top mRNA from alignment at E-fasciculatus_F_contig11732:1855..2830- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11732.1371.1 ID=mRNA_E-fasciculatus_F_contig11732.1371.1|Name=mRNA_E-fasciculatus_F_contig11732.1371.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=976bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11732:1855..2830- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11732:1855..2830- >mRNA_E-fasciculatus_F_contig11732.1371.1 ID=mRNA_E-fasciculatus_F_contig11732.1371.1|Name=mRNA_E-fasciculatus_F_contig11732.1371.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1920bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11732:1855..2830- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |