mRNA_E-fasciculatus_F_contig1172.1363.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1172.1363.1 vs. uniprot
Match: D7G8A7_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A7_ECTSI) HSP 1 Score: 570 bits (1469), Expect = 4.420e-187 Identity = 342/578 (59.17%), Postives = 365/578 (63.15%), Query Frame = 2
Query: 809 VGGPMSGESLGLWMARLRGQETARHGKRETTIDAISSPTPGGNLRGKHGASAERNSSLRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSEGGDAEHLFRAQVASFAELDEITRGNHETLKEVKRLLESTASGGGPTGAELTRTDKLQELDRLVAMAKDLGEVASKYMEDKDMHRKELALPPGSKAYFTAIRTGVCNAYLAGSVVDSRLVRTSKTGGMSVAGEFLKLLSGALPVVGGLAGFAAEALKAGDNSIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDCLSDETITTSYDARGGPVHSSAAGFGERAGIGACEWSQNNDGLPDCASDEDFMEWFAEEVVGCVPNNTGKSTPEEKAGRQLGKRHIRVILAAVGRGCLRGTHAIEEKVERLLNVVVTEAGMKPVSTLNAQERSFEQYPAASAPSHDGGLDLQAQFAAMQAKLEALEIENGKLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAMKRKVKKTQEEVWQEMAESAAAADQRPVTQDQLRRFAEVQDERHREHDANISWVQGALGALKKKNRKWRR 2542
VGGPMSGESLGLWMARLR QETARHGK+ETT+D ISSP PG G +G + XXXX +S+G +T G L + +Q + R + LG Y +D+ AGFAAEALKAGDN+IQTRRVIKMTDLAPDAVECCS+AKLLGLRLTD LSDETITTSYD RGGPVHS AAGFGE AGIGACEWSQ+N GLPDCASDEDFMEWFAEE CVPNNTGKSTPEEK GR+LGKRHIR+ILAAV RGCL+GTHAIEEKVE+LL VVV EAG KPVS NAQERSFEQ+PAA APSHDGGLDL A+FAAMQAKLEALEIENGKLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALA KRKVKKTQEEVWQEMAESAAA+ QRPVTQDQLRRFAEVQDERHREHDAN SWVQGALGALKKKNRKWRR
Sbjct: 274 VGGPMSGESLGLWMARLRRQETARHGKKETTMDTISSPIPGARQAGSNGQGSXXXXXXXXXXXXX--------------------------------------------ASKGAC-----------------LTPGFESVLHH-------------------HQNGCMQCIPRWQRRRQSLGS----YKQDRGYEH---------------------------------------------------------------AGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSVAKLLGLRLTDYLSDETITTSYDGRGGPVHS-AAGFGEGAGIGACEWSQSNGGLPDCASDEDFMEWFAEEAASCVPNNTGKSTPEEKTGRRLGKRHIRMILAAVERGCLQGTHAIEEKVEQLLKVVVPEAGAKPVSNSNAQERSFEQHPAAPAPSHDGGLDLHAEFAAMQAKLEALEIENGKLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAFKRKVKKTQEEVWQEMAESAAASGQRPVTQDQLRRFAEVQDERHREHDANFSWVQGALGALKKKNRKWRR 703
BLAST of mRNA_E-fasciculatus_F_contig1172.1363.1 vs. uniprot
Match: A0A6H5JVV5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVV5_9PHAE) HSP 1 Score: 329 bits (844), Expect = 1.970e-95 Identity = 175/198 (88.38%), Postives = 184/198 (92.93%), Query Frame = 2
Query: 1943 EEKAGRQLGKRHIRVILAAVGRGCLRGTHAIEEKVERLLNVVVTEAGMKPVSTLNAQERSFEQYPAASAPSHDGGLDLQAQFAAMQAKLEALEIENGKLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAMKRKVKKTQEEVWQEMAESAAAADQRPVTQDQLRRFAEVQDERHREHDANISWVQGALGALKKK-NRK 2533
E AGR+L KRHIR+ILAAV RGCL+ THAIEEKVERL VVV EAG+KPVS NAQERSFEQ PAA APSHDGGLDL A+FAAMQAKLEALEIENGKLTRKVSTMEK+IPKPQGEPSDEVDVGGGQALA+KRKVKKTQEEVWQEMAESAAAADQRPVTQ+QLRRFAEVQDERHREHDAN+SWVQGALGALKKK NRK
Sbjct: 506 ERTAGRRLAKRHIRMILAAVERGCLQETHAIEEKVERLRRVVVPEAGVKPVSNSNAQERSFEQRPAAPAPSHDGGLDLHAEFAAMQAKLEALEIENGKLTRKVSTMEKNIPKPQGEPSDEVDVGGGQALALKRKVKKTQEEVWQEMAESAAAADQRPVTQEQLRRFAEVQDERHREHDANLSWVQGALGALKKKTNRK 703
BLAST of mRNA_E-fasciculatus_F_contig1172.1363.1 vs. uniprot
Match: D7G1L2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI) HSP 1 Score: 289 bits (739), Expect = 2.160e-81 Identity = 194/520 (37.31%), Postives = 284/520 (54.62%), Query Frame = 2
Query: 1133 SSSEGGDAEHLFRAQVASFAELDEITRGNHETLKEVKRLLESTASGGGPTGAELTRTDKLQELDRLVAMAKDLGEVASKYMEDKDMHRKELALPPGSKAYFTAIRTGVCNAYLAGSVVDSRLVRTSKTGGMSVAGEFLKLLSGALPVVGGLAGFAAEALKAGDNSIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDCLSDETITTSYDARGGPVHSSAAGFGERAGIGACEWSQNNDGLPDCASDEDFMEWFAEEVVGCVPNNTGKSTPEEKAGRQLGKRHIRVILAAVGRGCLRGTHAIEEKVERLLNVVVTEAGMKPVSTLNAQERSFEQYPAASAPSHDGGLDLQAQFAAMQAKLEALE---------------------------------IENGK----------------LTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAMKRKVKKTQEEVWQEMAESAA-AADQRPVTQDQLRRFAEVQDERHREHDANISWVQGALGALKKKNRKWRR 2542
S + + + + RAQ +S A L + R N E L++++R++E+T EL+ + L LV M+ LGEVA K+ ED + RKELALPP SK Y++A+R+G+C AYLA SV+DS V TSKTGGM G LKL+SGA+P++GGL A +AL+AGD +QTRR++K+T +APD VECCSLA+ L L+LTD L + T D V+++A G G G GA D +P S+ED ++ EEV N+ G G++LGK+H+R +L A+ GCL G++ +K++ LL ++ EA KP +T + + P A A +HD GL +A+FAA+QA+L AL+ +++G+ L RKV +E+ +P+ EP D+VD GG AL + V +T + + AA AAD PVT + R F +Q+E+HREH+A + ++G + K RK RR
Sbjct: 154 SPGKAEEVDPMVRAQFSSSAGLGPLIRENPEALEDIQRVIEATTVRSIHPDDELSDIQSRRNLGTLVTMSTALGEVALKHTEDMSVRRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSNWVSTSKTGGMGKVGAALKLMSGAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSG--CGRGA-------DMMPGDMSEEDVFKYLLEEVTAYERNDHG--------GKRLGKKHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEALKSGRRXXXXXXXXXXXXXXXLERKVKKLEEHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAADHHPVTVSEQREFEALQNEKHREHEARLRELEGQIS--KATIRKGRR 654
BLAST of mRNA_E-fasciculatus_F_contig1172.1363.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI) HSP 1 Score: 293 bits (749), Expect = 3.330e-80 Identity = 169/378 (44.71%), Postives = 242/378 (64.02%), Query Frame = 2
Query: 1136 SSEGGDAEHLFRAQVASFAELDEITRGNHETLKEVKRLLESTASGGGPTGAELTRTDKLQELDRLVAMAKDLGEVASKYMEDKDMHRKELALPPGSKAYFTAIRTGVCNAYLAGSVVDSRLVRTSKTGGMSVAGEFLKLLSGALPVVGGLAGFAAEALKAGDNSIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDCLSDETITTSYDARGGPVHSSAAGFGERAGIGACEWSQNNDGLPDCASDEDFMEWFAEEVVGCVPNNTG--KSTPEEKAGRQLGKRHIRVILAAVGRGCLRGTHAIEEKVERLLNVVVTEAGMKPVSTLN------------AQERSFEQYPAASAPS-HDGGLDLQAQFAAMQAKLEALEI 2224
SS D +H+ +AQ++SF+ L + G+H+ L++V++L+E+ G L+ T L EL+RLVAMA+DLG++ S+++ ++D+ R+ELALPPG KAY+TAIRTG+CNAYLA SVV S LV TSKTG M AG+ L+ LS A+PVV GLAG AA ALKAGD +QTRRV K+ D+APD+ +CC LA+ L L+L+D D T+ T+ A H++A G G C WSQ+ PD A++E M+WF EEV PNN K+T +AGR+LGKRH++ +L AVGR CLRGT+ +EKV+ L+ +++ EA + ST + AQ S + + AA+ P+ DG AA+ ++ ++ +
Sbjct: 400 SSREADMDHMTQAQISSFSALSTLCGGSHKRLEQVRQLVEALDINRFSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMGGVEGG---CGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHVTRERTNHDASSAQPASRQSHAAATRPAVPDGAAKSDIDVAALMERVASMRM 774
BLAST of mRNA_E-fasciculatus_F_contig1172.1363.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI) HSP 1 Score: 290 bits (742), Expect = 4.720e-80 Identity = 196/520 (37.69%), Postives = 281/520 (54.04%), Query Frame = 2
Query: 1133 SSSEGGDAEHLFRAQVASFAELDEITRGNHETLKEVKRLLESTASGGGPTGAELTRTDKLQELDRLVAMAKDLGEVASKYMEDKDMHRKELALPPGSKAYFTAIRTGVCNAYLAGSVVDSRLVRTSKTGGMSVAGEFLKLLSGALPVVGGLAGFAAEALKAGDNSIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDCLSDETITTSYDARGGPVHSSAAGFGERAGIGACEWSQNNDGLPDCASDEDFMEWFAEEVVGCVPNNTGKSTPEEKAGRQLGKRHIRVILAAVGRGCLRGTHAIEEKVERLLNVVVTEAGMKPVSTLNAQERSFEQYPAASAPSHDGGLDLQAQFAAMQAKLEALE---------------------------------IENGK----------------LTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAMKRKVKKTQEEVWQEMAESAA-AADQRPVTQDQLRRFAEVQDERHREHDANISWVQGALGALKKKNRKWRR 2542
S + + + LFRAQ+ S A LD + R N L+ ++ +E +G EL + L LV M+ LGEVA ++ ED ++ RKELALPP SKAY+TAIRTG+C AYLA S +DS V TSKTGGM G LKL+S A+P++GGL A +AL+AGD +QTRR++K+T +APD VECCSLA+ L L+LTD L + T D V+++A G G G GA D +P S+ED ++ EEV N+ G G++LGKRH+R +L A+ GCL G++ +K++ LL ++ EA KP +T + + P A A +HD GL +A+FAA+QA+L AL+ +++G+ L RKV +E+ +P+ EP D+VD GG AL + V +T + + AA A D PVT + R F +QDE+HREH+A + ++G + +K R+ RR
Sbjct: 349 SPEKAEEVDRLFRAQLVSSAGLDSLIRENPAALENIQLAIERQVAGSFYPDNELGDMQSRRNLGTLVTMSTALGEVALRHTEDMNVQRKELALPPFSKAYYTAIRTGLCKAYLAASAIDSDWVITSKTGGMGKVGAALKLMSSAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSG--CGRGA-------DMMPGDMSEEDVFKYLLEEVTADERNDHG--------GKRLGKRHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEALKSGRRXXXXXXXXXXXXXXELERKVKKLEQHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAVDHHPVTVSEQREFEALQDEKHREHEARLRELEGQI--IKATIRQGRR 849
BLAST of mRNA_E-fasciculatus_F_contig1172.1363.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI) HSP 1 Score: 288 bits (738), Expect = 1.430e-78 Identity = 206/532 (38.72%), Postives = 290/532 (54.51%), Query Frame = 2
Query: 1136 SSEGGDAEHLFRAQVASFAELDEITRGNHETLKEVKRLLESTASGGGPTGAELTRTDKLQELDRLVAMAKDLGEVASKYMEDKDMHRKELALPPGSKAYFTAIRTGVCNAYLAGSVVDSRLVRTSKTGGMSVAGEFLKLLSGALPVVGGLAGFAAEALKAGDNSIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDCLSDETITTSYDARGGPVHSSAAGFGERAGIGACEWSQNNDGLPDCASDEDFMEWFAEEVVGCVPN--NTGKSTPEEKAGRQLGKRHIRVILAAVGRGCLRGTHAIEEKVERLLNVVVTEAGMKPVSTLN------------AQERSFEQYPAASAPSHDGG-----LDLQA---QFAAMQAKLEAL--EIENG-------------------------------------KLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAMKRKVKKTQEEVWQEMA-ESAAAADQRPVTQDQLRRFAEV-------QDERHREHDANISWVQGALGALKKK 2524
SS D +H+ +AQ++SF+ L + G+ +L++V +L+E+ G L T L EL+RLVAMA+DLG++ S+++ ++D+ R+ELALPPG KAY+TAIRTG+CNAYLA SVV S LV TSKTG M AG+ L+ LS A+PVV GLAG AA ALKAGD +QTRRV K+ D+APD+ +CC LA+ L L+L+D D T+ T A H++A G G C WSQ+ PD A++E M+WF EEV PN + K+T +AGR+LG RH++ +L AVGR CLRGT+ +EKV+ L+ +++ EA K ST + AQ S + + AA+ P+ G LD+ A + A+M+ + EA E++ G + K + KP G SD + AL ++ V +T + + E A E A AA VT QL E+ DE HREHDA +S Q A+ + +K
Sbjct: 427 SSREADMDHITQAQISSFSSLSTLCGGSQASLEQVGQLVEALGINRSSPGTGLNGTGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVE---GECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHDASSAQPASRQSHAAATRPAAPDGAAKNDLDVAALMERMASMRIRTEATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKILNKKVMKP-GPDSDSLVAS---ALKQRQAVTETAVDDFLERAQERAPAAGNDVVTLGQLTEAVELLKEVHSKYDELHREHDAKLSRFQRAVDRITRK 951
BLAST of mRNA_E-fasciculatus_F_contig1172.1363.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI) HSP 1 Score: 291 bits (744), Expect = 2.400e-78 Identity = 170/378 (44.97%), Postives = 241/378 (63.76%), Query Frame = 2
Query: 1136 SSEGGDAEHLFRAQVASFAELDEITRGNHETLKEVKRLLESTASGGGPTGAELTRTDKLQELDRLVAMAKDLGEVASKYMEDKDMHRKELALPPGSKAYFTAIRTGVCNAYLAGSVVDSRLVRTSKTGGMSVAGEFLKLLSGALPVVGGLAGFAAEALKAGDNSIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDCLSDETITTSYDARGGPVHSSAAGFGERAGIGACEWSQNNDGLPDCASDEDFMEWFAEEVVGCVPNNTG--KSTPEEKAGRQLGKRHIRVILAAVGRGCLRGTHAIEEKVERLLNVVVTEAGMKPVST-------LN-----AQERSFEQYPAASAPS-HDGGLDLQAQFAAMQAKLEALEI 2224
SS D + + +AQ++SF+ L + G H++L++V++L+E+ G L+ T L E++RLVAMA+DLG + S+++ ++D+ R+ELALPPG KAY+TAIRTG+CNAYLA SVV S LV TSKTG M AG+ L+ LS A+PVV GLAG AA ALKAGD +QTRRV K+ D+APD+ +CC LA+ L L+L+D D T+ T+ A H++A G G C WSQ+ PD A++E M+WF EEV PNN K+TP +AGR+LG RH++ +L AVGR CLRGT+ +EKV+ L+ +++ EA + ST LN AQ S + + AA+ P+ DG AA+ ++ ++ I
Sbjct: 612 SSREADMDDMTQAQISSFSALSTLCGGRHKSLEQVRQLVEALGINRSSPGTGLSETGTLGEVNRLVAMAEDLGGMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGAAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGG---CGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHGTRERLNHDASSAQPASRQSHAAATRPAVPDGAPKSDIDVAALMERMASMRI 986
BLAST of mRNA_E-fasciculatus_F_contig1172.1363.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI) HSP 1 Score: 270 bits (691), Expect = 1.980e-71 Identity = 193/494 (39.07%), Postives = 262/494 (53.04%), Query Frame = 2
Query: 1136 SSEGGDAEHLFRAQVASFAELDEITRGNHETLKEVKRLLEST------ASGGGPTGAELTRTDKLQELDRLVAMAKDLGEVASKYMEDKDMHRKELALPPGSKAYFTAIRTGVCNAYLAGSVVDSRLVRTSKTGGMSVAGEFLKLLSGALPVVGGLAGFAAEALKAGDNSIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDCLSDETITTSYDARGGPVHSSAAGFGERAGIGACEWSQNNDGLPDCASDEDFMEWFAEEVVGCVP--NNTGKSTPEEKAGRQLGKRHIRVILAAVGRGCLRGTHAIEEKVERLLNVVVTEAGMKPVSTLNAQERSFEQYPAA---------SAPSHDGGLD-----------LQAQFAAMQAKLEALEIENGKLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAMKRKVKKTQEEVWQEMAESAAAADQRPVTQDQLRRFAEVQDERHREHDANISWVQGALGALKKKNRK 2533
+ E D H F QVASFA L +T+G+ E L E+K+L+ + A G P + +KL++L+RL MA L E+AS +MED+ M +E L KAYF A+R GVCNA+LA SVV S LV TSKTGG+ AG+ LKLLS A+P+VGGL G A+ ALK GD IQTRRV+K+ D+A DAVECCSLA+ L G WSQ LPD A D D MEWFA+EV P ++ ++TPEE+AGR+LGK+H++ +L AVG G L G +IEEKVE L+ V+ E VST A + EQ P++ SA S G D L + +++ L+ + KL +VS++++ + K + V +GGGQAL + V K E +E A AADQ V D+ + E Q E R H I ++ + +K++RK
Sbjct: 708 AEEERDPGHSFGEQVASFAGLAALTKGDCEALDEIKQLIRAPPIRAPPADGVSPAPEPIDE-EKLRDLNRLAEMATTLSEIASSHMEDQWMQEREQGLSQARKAYFNAVRDGVCNAFLASSVVGSNLVATSKTGGIGTAGKALKLLSAAVPMVGGLGGIASAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXX------------XGGGGWSQGEYALPDGARDRDVMEWFADEVANLEPQDHHATRTTPEEQAGRRLGKKHLQTLLLAVGNGRLEGAKSIEEKVELLVRTVLPEDEGNAVSTPQAPDVVVEQVPSSTDSVLRQTDSAASLLIGRDSVESDVSSVAALMGEIQSLRVSLDDSNAKQSKLENEVSSLKEKV-KSAPDSDGVVSIGGGQALMQRVVVTKKPETFLEESQHEAVAADQY-VPIDEWIEYKERQAEIDRGHSDKIDGLEVKVD--RKQDRK 1184
BLAST of mRNA_E-fasciculatus_F_contig1172.1363.1 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI) HSP 1 Score: 263 bits (671), Expect = 1.850e-70 Identity = 171/449 (38.08%), Postives = 252/449 (56.12%), Query Frame = 2
Query: 1133 SSSEGGDAEHLFRAQVASFAELDEITRGNHETLKEVKRLLESTASGGGPTGAELTRTDKLQELDRLVAMAKDLGEVASKYMEDKDMHRKELALPPGSKAYFTAIRTGVCNAYLAGSVVDSRLVRTSKTGGMSVAGEFLKLLSGALPVVGGLAGFAAEALKAGDNSIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDCLSDETITTSYDARGGPVHSSAAGFGERAGIGACEWSQNNDGLPDCASDEDFMEWFAEEVVGCVPNNTGKSTPEEKAGRQLGKRHIRVILAAVGRGCLRGTHAIEEKVERLLNVVVTEAGMKPVSTLNAQERSFEQYPAASAPSHDGGLDLQAQFAAMQAKLEALEIE-----------------------------------NGKLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAMKRKVKKTQEEVWQ 2374
S + + + LF AQ++S A LD + R + L++++R++EST +G +L+ D ++L LV M+ LGEVA ++ ED ++ RKELALP S AY++A+R+G+C AYLA SV+DS V TSKTGGM AG +KL+S A+PVVGGL A +AL+AGD+ +QTRR++K+T +A DAV+CC LA+ L L+LTD L ++ T+ +A V ++A G GA D P S+ED E+ EEV N+ G G +LGK+H+R +L A+ RG L G++ E+K+E L+ ++ EA +TL+ + + P P+HDGGL +A+F AMQA LEAL+ + N +L KV+ MEK +P+ EP D + G Q L K ++K+ E WQ
Sbjct: 399 SPGKAEEMDRLFSAQLSSSAGLDSLIREKPKALEDIQRVIESTVAGSVSPDDKLSDIDGRRKLGTLVTMSTALGEVALRHTEDMNIQRKELALPAFSNAYYSAVRSGLCQAYLAASVIDSDWVSTSKTGGMGKAGAAMKLMSSAVPVVGGLPELAGKALEAGDHYLQTRRLVKITAMASDAVDCCFLARRLALQLTDGLRNDAGATADNADEVRVDTTAGMNG-----GA-------DMTPGDMSEEDVFEYLLEEVASYKRNDHG--------GVRLGKKHLRKLLKAIQRGSLDGSNGTEQKIEVLVLKILPEADTSLAATLSTPKEVIVRSPPVVTPAHDGGLPSRAEFTAMQAALEALKFDRETQQXXXXXXXXXXXXXXXXXXXXXXXXXAVESRNKQLREKVAAMEKRVPEGDCEPCDRGNAEGRQVLQQKLEMKEDLETFWQ 827
BLAST of mRNA_E-fasciculatus_F_contig1172.1363.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI) HSP 1 Score: 265 bits (677), Expect = 8.880e-70 Identity = 156/362 (43.09%), Postives = 228/362 (62.98%), Query Frame = 2
Query: 1133 SSSEGGDAEHLFRAQVASFAELDEITRGNHETLKEVKRLLESTASGGGPTGAELTRTDKLQELDRLVAMAKDLGEVASKYMEDKDMHRKELALPPGSKAYFTAIRTGVCNAYLAGSVVDSRLVRTSKTGGMSVAGEFLKLLSGALPVVGGLAGFAAEALKAGDNSIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDCLSDETITTSYDARGGPVHSSAAGFGERAGIGACEWSQNNDGLPDCASDEDFMEWFAEEVVGCVPNNTGKSTPEEKAGRQLGKRHIRVILAAVGRGCLRGTHAIEEKVERLLNVVVTEAGMKPVSTLNAQERSFEQYPAASAPSHDGGLDLQAQFAAMQAKLEAL 2218
S + + + LFR Q++S A LD + + N E L++++R++++ A+GG EL+ ++ ++L L+ MAK LGEVA + EDKD+ RKELAL P SKAY+TA+R+G+CNAYLA SV+DS V TSKTGGM G L LLS A+PV+ GLAG A +AL+ GD+ +QTRR+ K+T +A D +ECCSLA+ L L+LTD L D+T + H++A G G G+ ++ D LPD ++D E EEV ++ G G++LGK+H+R +L A+ RGCL G+ I++K+E LL ++ EA ++ T + + Q P A AP+H+G L A AA+QA +EAL
Sbjct: 466 SPGKAAEVDRLFRVQLSSSAGLDSLIKENPEALEDIQRVIKAPAAGGFYFDDELSDMERRRKLGALMNMAKALGEVALSHTEDKDVQRKELALAPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTSKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHYLQTRRLAKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDETDQVCTHTTA---GMNGGSGS---GRDADILPDIIIEDDVFEHLLEEVARYERSDHG--------GKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMELLLLEILPEADIRTSETSISPKEVIVQSPPALAPTHNGTLPSMADIAALQAAVEAL 813 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1172.1363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 23
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1172.1363.1 >prot_E-fasciculatus_F_contig1172.1363.1 ID=prot_E-fasciculatus_F_contig1172.1363.1|Name=mRNA_E-fasciculatus_F_contig1172.1363.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=696bp MPKELGALTELQRLDLYRNELSGPIPPEFGHLAALVSITLFQNCLTGGIPback to top mRNA from alignment at E-fasciculatus_F_contig1172:10458..19196- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1172.1363.1 ID=mRNA_E-fasciculatus_F_contig1172.1363.1|Name=mRNA_E-fasciculatus_F_contig1172.1363.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8739bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1172:10458..19196- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1172:10458..19196- >mRNA_E-fasciculatus_F_contig1172.1363.1 ID=mRNA_E-fasciculatus_F_contig1172.1363.1|Name=mRNA_E-fasciculatus_F_contig1172.1363.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4176bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1172:10458..19196- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |