mRNA_E-fasciculatus_F_contig10128.132.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10128.132.1
Unique NamemRNA_E-fasciculatus_F_contig10128.132.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: D7FUN3_ECTSI (Arsenite translocating ATPase like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN3_ECTSI)

HSP 1 Score: 415 bits (1066), Expect = 4.510e-140
Identity = 242/286 (84.62%), Postives = 247/286 (86.36%), Query Frame = 1 
Query:    1 MPHPPALRMRQSLPTALLSLAYLTAS-TTAFVLGPLRASRVTSANNXXXXXXXXXXXXXXXXXXXXXXXX----PASTRLLAGSASSSALTPTAPHAAGLRKARSSRGGGVRSLKSVASPAGLEKGVSARGLEELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEDDTFAR 843
            MPHPPALRM QSLPTALLSLAYLTAS TTAFVLGPLRASRVTSA+N                            P STRLLAGSASS ALTPTAP A GLRKARSSR GGVRSLKSVA+PAGLEKGVSARGL ELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQD+SGGEPVR+IGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSE+  F R
Sbjct:    1 MPHPPALRMCQSLPTALLSLAYLTASSTTAFVLGPLRASRVTSASNRRALLPAAAAYRRLTSASQHQQRPQRRCPTSTRLLAGSASS-ALTPTAPQA-GLRKARSSRSGGVRSLKSVAAPAGLEKGVSARGLGELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEEQKFDR 284
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A7S0NW41_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NW41_9EUKA)

HSP 1 Score: 150 bits (380), Expect = 1.860e-37
Identity = 81/152 (53.29%), Postives = 111/152 (73.03%), Query Frame = 1 
Query:  367 SARGLEELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMG-VPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLAR 819
            + R L +LLE R+   +R +F GGKGGVGKTST++A+A++CAD GL TL++STDPAHSL DAL QD+SGG PV V+G   LSAMEV+T +AV+ F EA+  F  + +   +G V ++ +  LGL EF+++L N PPG+DEL+AL+ VL   R
Sbjct:   35 ATRPLAQLLE-RDSTQQRLIFVGGKGGVGKTSTSSAIALRCADKGLSTLIVSTDPAHSLSDALVQDVSGGSPVLVMGCMGLSAMEVETDKAVERFREAVGGFRAADLG--LGSVAEEAIGKLGLDEFADILDNTPPGLDELLALTEVLSFVR 183
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A8J6C886_DIALT (Uncharacterized protein n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C886_DIALT)

HSP 1 Score: 151 bits (381), Expect = 4.680e-37
Identity = 82/152 (53.95%), Postives = 111/152 (73.03%), Query Frame = 1 
Query:  379 LEELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSF-----DISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLAR 819
            L ++L+  +G  +RFV  GGKGGVGKTSTA+A+AI+CA +GLRTLV STDPAHSLGDAL  D++GG+PV V GLD L A+E+D  EA+  F  AL++F      + G+AEE+      +  LGL EF+++L  PPPG+DEL+AL+ V++L R
Sbjct:   57 LADVLDT-SGAAQRFVLVGGKGGVGKTSTASALAIRCAQSGLRTLVASTDPAHSLGDALQLDLAGGKPVAVPGLDGLDALEIDPSEAIGRFRAALAAFRPADLGLGGLAEEL------LSQLGLDEFADILDEPPPGLDELLALAEVIELTR 201
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A0G4GDI4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GDI4_9ALVE)

HSP 1 Score: 148 bits (374), Expect = 3.660e-36
Identity = 85/159 (53.46%), Postives = 108/159 (67.92%), Query Frame = 1 
Query:  376 GLEELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDI--------SGGE----PVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLA 816
            G  +LL  + G  ++ V FGGKGGVGKT++AAA A+Q ADAG RTLV+STDPAHSLGDAL QDI          GE    PV V G  NL A+EVD   AV+EF +AL   D++ MAE++G+    +ESLGL +   +L +PPPGIDELV ++ VL+LA
Sbjct:   10 GFSDLLSPK-GAGQKIVLFGGKGGVGKTTSAAAAAVQLADAGFRTLVVSTDPAHSLGDALGQDIMYAKGAAEETGELSAAPVAVSGCANLWALEVDASGAVREFRDALKKIDLNDMAEKLGIDPSTLESLGLEDLVRLLDSPPPGIDELVGIANVLQLA 167
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A7S2B6R7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6R7_9STRA)

HSP 1 Score: 147 bits (372), Expect = 5.640e-36
Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 1 
Query:  385 ELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGE--PVRVIGLD-NLSAMEVDTVEAVKEFEEALSSFDISGMAEEMG--VPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSED 828
            ELL    G   RFVF GGKGGVGKTS ++A+A+  ADAGLRTLV+S DPAHSLGD L  D+  G    V + G D NL AME+D   ++KEF +A++ FD++ +A+E+G     D   +LGL EF+ +L NPPPG+DELVAL+ V++LAR  D
Sbjct:   52 ELLSPPAGEGLRFVFVGGKGGVGKTSCSSAIAVTLADAGLRTLVVSVDPAHSLGDVLATDLPRGSNNAVPIFGCDDNLYAMEIDAEASLKEFTDAIAGFDLAAVAKEIGGQAGADFASNLGLDEFAGILRNPPPGVDELVALNAVVRLARGTD 204
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A7R9U218_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U218_9STRA)

HSP 1 Score: 147 bits (372), Expect = 5.660e-36
Identity = 78/137 (56.93%), Postives = 100/137 (72.99%), Query Frame = 1 
Query:  406 GVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLA 816
            G  ++ VF GGKGGVGKTSTAAA+ +  AD GL TLV+STDPAHSLGDAL QD+ GG+ V V G  NL A+EVD   AV+EF+EAL + D   +A  +G+P+D+V  LGL + + VL   PPG+DELV+L+ V+ LA
Sbjct:    7 GGQQQLVFLGGKGGVGKTSTAAALGVTMADRGLSTLVLSTDPAHSLGDALGQDVGGGDAVLVQGTTNLYALEVDGERAVREFQEALEALDAKKIAVTLGLPEDVVAKLGLEDLAGVLNTTPPGLDELVSLAAVIDLA 143
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A7S0HAT0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HAT0_9EUKA)

HSP 1 Score: 140 bits (352), Expect = 5.470e-35
Identity = 76/146 (52.05%), Postives = 105/146 (71.92%), Query Frame = 1 
Query:  382 EELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLAR 819
            EE L+A     +RFVF GGKGGVGKTST++++A++ AD+GL TL++STDPAHSL DAL QD+ GG+PV V G++ L AMEV T EA + F  A+  F  S +    GV +++V  LGL + ++VL + PPG+DEL+AL+ VL L +
Sbjct:  160 EETLKADG---DRFVFVGGKGGVGKTSTSSSIAVRLADSGLSTLIVSTDPAHSLSDALMQDVGGGKPVVVNGVEGLEAMEVSTEEAAERFRSAIGGFRASDLGLG-GVAEELVSKLGLDDLADVLDSIPPGLDELLALAEVLALVQ 301
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A7S3E7S7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E7S7_9RHOD)

HSP 1 Score: 141 bits (355), Expect = 1.520e-34
Identity = 80/159 (50.31%), Postives = 108/159 (67.92%), Query Frame = 1 
Query:  370 ARGLEELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSF-DISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEDDTFAR 843
            + G   LLE+++   +RFVF  GKGGVGKT++++A+A++ A  GL+TLV+STDPAHSLGD LD D+S GE + +   DNLSA+EVDT EAV+EF+  +SS  ++S         K++   LGL EF EVL   PPG DE VAL +VL+LA   D  + R
Sbjct:   56 SNGFNRLLESKD---QRFVFVSGKGGVGKTTSSSAMAVRFAAEGLKTLVLSTDPAHSLGDCLDVDLSSGEIIPIT--DNLSALEVDTAEAVEEFKRTISSLNELSEEDRAKSGAKELANRLGLGEFGEVLTTLPPGADEFVALVKVLRLAEEADQGYER 209
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A0G4FEQ3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FEQ3_VITBC)

HSP 1 Score: 142 bits (359), Expect = 3.790e-34
Identity = 77/152 (50.66%), Postives = 108/152 (71.05%), Query Frame = 1 
Query:  379 LEELLEARNG-VNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISG--GEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSE 825
            L +LL+A  G  + R + FGGKGGVGKT+TAAA A++ AD GLRTL+ISTDPAHSLGDAL Q +     E   V G+DNL A+EVD  +AV E + AL +FD   ++ ++G+   ++E +G+ +  ++  NPPPGIDELVA+++VL+L R +
Sbjct:   62 LNDLLQAPGGSTSTRLILFGGKGGVGKTTTAAATAVRFADEGLRTLIISTDPAHSLGDALGQQLHAPPDEMTAVEGVDNLWALEVDAGQAVIEMKAALETFDAIELSRKLGIGTTVLEGIGIGDMVKLFENPPPGIDELVAIAKVLQLTRGK 213
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: R1FYY7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FYY7_EMIHU)

HSP 1 Score: 142 bits (357), Expect = 4.130e-34
Identity = 75/151 (49.67%), Postives = 108/151 (71.52%), Query Frame = 1 
Query:  400 RNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLAR-SEDDTFARAS 849
            ++G  +R +  GGKGGVGKTS+++A+A++ AD GL TL++STDPAHSL DAL QD+SGG PV V G +NL AMEV+T +AV  F  A+S F  + +    G+ ++++  LGL EF+++L N PPG+DEL+AL+  L + R +E D+   AS
Sbjct:    3 QSGAAQRLILVGGKGGVGKTSSSSAIAVRLADTGLSTLIVSTDPAHSLSDALMQDVSGGSPVGVAGCENLQAMEVETADAVDRFRAAVSGFRAADLGLG-GLAEEVLGQLGLDEFADILDNVPPGLDELLALAETLAVVRGAEPDSDGAAS 152
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUN3_ECTSI4.510e-14084.62Arsenite translocating ATPase like protein n=1 Tax... [more]
A0A7S0NW41_9EUKA1.860e-3753.29Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A8J6C886_DIALT4.680e-3753.95Uncharacterized protein n=4 Tax=Diacronema lutheri... [more]
A0A0G4GDI4_9ALVE3.660e-3653.46Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S2B6R7_9STRA5.640e-3653.59Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9U218_9STRA5.660e-3656.93Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0HAT0_9EUKA5.470e-3552.05Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S3E7S7_9RHOD1.520e-3450.31Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A0G4FEQ3_VITBC3.790e-3450.66Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
R1FYY7_EMIHU4.130e-3449.67Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10128contigE-fasciculatus_F_contig10128:463..4701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score415.6
Seed ortholog evalue1.9e-113
Seed eggNOG ortholog2880.D7FUN3
KEGG koko:K01551
KEGG TC3.A.19.1,3.A.21.1,3.A.4.1
EggNOG free text desc.ATPase activity
EggNOG OGsCOG0003@1,KOG2825@2759
EC3.6.3.16
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko02000
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionarsenite translocating ATPase like protein
Ec32 orthologEc-26_002300.1
Exons5
Model size989
Cds size861
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10128.132.1prot_E-fasciculatus_F_contig10128.132.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10128 591..4701 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927513.8181689-UTR-E-fasciculatus_F_contig10128:462..5901622927513.8181689-UTR-E-fasciculatus_F_contig10128:462..590Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10128 463..590 -
1695995573.1984026-UTR-E-fasciculatus_F_contig10128:462..5901695995573.1984026-UTR-E-fasciculatus_F_contig10128:462..590Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10128 463..590 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927513.832698-CDS-E-fasciculatus_F_contig10128:590..6241622927513.832698-CDS-E-fasciculatus_F_contig10128:590..624Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10128 591..624 -
1695995573.2097769-CDS-E-fasciculatus_F_contig10128:590..6241695995573.2097769-CDS-E-fasciculatus_F_contig10128:590..624Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10128 591..624 -
1622927513.846259-CDS-E-fasciculatus_F_contig10128:1550..16541622927513.846259-CDS-E-fasciculatus_F_contig10128:1550..1654Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10128 1551..1654 -
1695995573.2211585-CDS-E-fasciculatus_F_contig10128:1550..16541695995573.2211585-CDS-E-fasciculatus_F_contig10128:1550..1654Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10128 1551..1654 -
1622927513.8582058-CDS-E-fasciculatus_F_contig10128:2521..26231622927513.8582058-CDS-E-fasciculatus_F_contig10128:2521..2623Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10128 2522..2623 -
1695995573.2306082-CDS-E-fasciculatus_F_contig10128:2521..26231695995573.2306082-CDS-E-fasciculatus_F_contig10128:2521..2623Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10128 2522..2623 -
1622927513.869866-CDS-E-fasciculatus_F_contig10128:3440..35551622927513.869866-CDS-E-fasciculatus_F_contig10128:3440..3555Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10128 3441..3555 -
1695995573.2420416-CDS-E-fasciculatus_F_contig10128:3440..35551695995573.2420416-CDS-E-fasciculatus_F_contig10128:3440..3555Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10128 3441..3555 -
1622927513.881561-CDS-E-fasciculatus_F_contig10128:4195..47011622927513.881561-CDS-E-fasciculatus_F_contig10128:4195..4701Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10128 4196..4701 -
1695995573.2500048-CDS-E-fasciculatus_F_contig10128:4195..47011695995573.2500048-CDS-E-fasciculatus_F_contig10128:4195..4701Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10128 4196..4701 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10128.132.1

>prot_E-fasciculatus_F_contig10128.132.1 ID=prot_E-fasciculatus_F_contig10128.132.1|Name=mRNA_E-fasciculatus_F_contig10128.132.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=287bp
MPHPPALRMRQSLPTALLSLAYLTASTTAFVLGPLRASRVTSANNRRALL
PAAAAYRRLTAASQQQRRCPASTRLLAGSASSSALTPTAPHAAGLRKARS
SRGGGVRSLKSVASPAGLEKGVSARGLEELLEARNGVNERFVFFGGKGGV
GKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGL
DNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSE
VLANPPPGIDELVALSRVLKLARSEDDTFARASTNR*
back to top

mRNA from alignment at E-fasciculatus_F_contig10128:463..4701-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10128.132.1 ID=mRNA_E-fasciculatus_F_contig10128.132.1|Name=mRNA_E-fasciculatus_F_contig10128.132.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4239bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10128:463..4701- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCGCACCCGCCAGCCCTGAGGATGCGCCAATCCTTGCCGACTGCCCT
GCTGTCCTTGGCGTACCTAACCGCAAGCACCACCGCTTTCGTGCTCGGTC
CGCTGCGTGCATCACGTGTCACGTCCGCCAATAATCGCCGAGCCTTGCTT
CCGGCAGCGGCGGCCTACCGACGATTGACCGCCGCTTCGCAACAGCAGCG
GCGCTGTCCGGCCTCCACGCGTCTCCTGGCGGGATCGGCATCATCATCAG
CGTTGACACCAACAGCGCCACATGCTGCTGGCCTGCGCAAGGCGAGGAGC
AGTAGAGGTGGCGGTGTTCGCTCGCTGAAGAGCGTGGCATCTCCGGCAGG
TCTGGAGAAAGGCGTCTCCGCCCGTGGACTGGAAGAGCTGCTGGAGGCAA
GGAACGGGGTTAACGAGCGCTTCGTCTTCTTTGGCGGCAAGGGCGGTGTC
GGCAAGACGTCCACGGCCGCCGCCGTCGCGATCCAGTGTGCTGATGCCGG
GCTAAGGTGAGAGGTGTGGGTTTTTGTGAATGGGGCGGTAATCGTTGCGA
GAGAGAGAGAGAGAGAGGGAGAGGTTGCGTGAGATCTGCTCATCATGTTG
CAAGTTGATGTTGATAAGTTGATGTTAATACAGCAGCAGTGTGAGCGGCA
CAAGACCAACCTCACCACACAAGAGGTTCTCCAAGGGTTGACGTTGCTGC
TGCTGTAGCTCTCTCGACCGTACGACCGATACCCAAGCTAAGCGTGTGCT
GGCTGTGTTCGGGAACCCTCGAAGCCCGCGCTAGCACTACAGCAGCGACA
CTCGCGTAGGTGGGCTTGGTACAGTCCGCCTGCTGCGACTCGCGCTTTGT
TCGCCCGCAGCTCCTTCGCAAATTTCCTAGTGTATGTCGGCTACAACCTT
ATTTTAGACTGATGCATGCAGCACGTCTCCACCTCTCCGTATACAGCCGG
ATGCAAAGTTCCCTCATCATTGTCGTGTCGTTGTTGATTTTTCGTGTGCG
CTAAAGTCAGCAGTCGTGCTGGCATAACATGCGCCAGACGGACTAGGCGT
CAGATTCGACCCGAATCACGCTTGTTGCCGTGCTGTCCAACAGCGGCAGC
GCCGCTCTTTTTTCGATGCGCTCGCCCGCCGCGTTTTTGAACCCAGGACG
CTGGTCATCAGCACCGACCCGGCGCACTCCCTGGGCGACGCGTTGGACCA
GGACATTTCCGGCGGAGAGCCCGTGAGGGTGATCGGCTTGGACAACCTCT
CGGCTATGGAGGTGGGTGGGTACCACCTTCTCCCTGAGCCCCCCGCCCTC
GTGGCAAGGGGGGCGCCCGGCCTGCACGCGCACAAGGATGCATTGCCCCC
AGGATGGAATCAGGCGGGGGAGGGAGTCGTACTCTTGCGTTTTGCATGCC
TTAGCGGTTGGACCATTGACCATCGAGAGGACACGGGGAGGGAGGGAGCA
TTTAGTCTTTTGATCAGTGGGTCACGCAGAACATGCTTTTTGCGACCCCC
GGGCTCGAGGGGGGACACTGACCGCTCCCGGATGGGGTCCCTGTACTTCT
TCCTGTACTAAACCAAGCTGGGTTCACTGCACGAGAACGGTGTAAGCGGG
GAGGTAGCTGCTGTGCGTCATTCTGGCGCCCCCTTGTTGTGCCACTCAGA
GGTCGTGTTTCTCCGCGCTCTGGGACGACAATAATATAGTTCGTTTTTTG
TTTGTTTCGCCCTTGTCACGAGGTGGTTTCATTGTGTTTCACGGTCGGGG
CGTGTCGGGATTCATTTTACGCCGACTTCTTTCCTTTTTTTCCGAGGTCA
ATGGTCCAACGACTACGCCATGCACCGCTATCAATACACCCCCCCCGTCT
TCCTTCGCTGAACACTCGCGCCATCTATTTCTTGGCATCTTCGTACATGG
TGTGTACCCATTTCTGAACCCCGAGAGTGTTTGTGAGCTAGTTTCCTGTT
CCGTGGAGTCACCGAGTTCTCAATCTCATGGACTTCGTGCTTGCATGTAC
AATTTTTTAATTTTTTTCTTGTACATCTTCTCTGCCCCTCCCCCGTTTGC
TGTCTGCCGCGTGAAACGACGTTGTTAGGTGGATACTGTCGAAGCTGTCA
AGGAGTTCGAGGAGGCCTTGTCCAGCTTTGACATATCGGGGATGGCTGAG
GAAATGGGCGTGCCTAAGGACATGGTGGAGGTACGACCGTTCTTTTTGCA
TTTCCCCCCCCAATTGAGGAGGCAGCACGTCACAGTAAATAACAATTGTT
TTCTCTGTTGCTGTTGTTGCCCGTCCCATATGACAGTTTCGGCTTGAATC
GTTTTGGCGCTTCTGATATTTCGTGCTCTCGTTTCGAGGGCGGCCAGAGA
GAGGGAGGTAGTTGGTGTGCCTCAAGAACACGGCAAGGGGTATGATATGA
CGGCTCAGGCGCGACAAGCCTTTTTCCTTCGTACACGTGGTTTCGGCGCC
AATACATTCGGCATTACGGCGTATGCGTAGGGTAATTTGGTGTTGGAATG
GGGGAGGAGCGCTATTGTAGTCACGCTATTGTAGTCACGGGAGCAACTGA
GAGACATTGTCCGTGCACAAAGTCCTGTGTTTCTTGGCTCTACGCGTGGT
ATGCATACAGATGGCCCCATCCCGCAAGAACTTGGGAGATACAGAACTTC
AGCAGGCCGGCTAAAACGTGAGGGCAGGTGCTCATAGCCCTACACCAAGT
GCTACACTCGCCTTGCCGCCGTCGATTCCAGAGCAGTAATTGAGAGGACA
AACCTCGCACAGGTTCTTAAATGAAACGGTGGTGCCACCTCGATGCAAGC
ACACGACACGCACAGATACAGGGCACCTGCATGTTTGGTCTTGTGTCATC
GCCGTACGATGCTCGGGAACGAACGGAGTCGGGAGCACGGTTGCTCGCGT
GCCCGGCAGATGAATGGTAGTTCACGCACAACCGGAGAGGGTAAAGCTGC
TCATCGCCCCTCTGACCCTGGTGGCCGCATTGTCTCCGCCGCGCCTACCC
TGCCCCCTTTTGCTCGTCGCTGGGCTGGTGTTGTTTTGTCCTGCCAGAGT
CTTGGCCTTTCGGAGTTCAGCGAGGTGTTGGCCAACCCGCCCCCGGGGAT
TGATGAGCTGGTGGCCCTCTCGAGGGTTCTCAAGCTGGCCCGTTCGGAAG
AGTAAGTGGAGCATATGGAAATTGGCGGAAGGGCTCTCTTGATGCAGGCT
TTCTCTCTCTGTCTGTGTGTCTCTCTCTCTCGTTCTCTCTCTCTTTCTCT
CTCTCTCACTTTCCCATTCTCTCTCTCTTCTTCAGTTGTAGTCGTGGTTC
TTGTTTTTTCCAGAAAGCGAAATATCACGTATTCGCTGACTTCTTTCCAG
CAATGAGAGCGCAGCACGTCTGCGTAAACACCGCGGCAAGAGATTAATTT
TTTCGTTGGCTTATGTTGTGTTGTTTCCCTCTGGTGATTTTGTTGTTTTT
TTCTTGAAGAAAACAAACAGACTCATCTCTATCCATAGAAACGAAATTCA
TGGTAAACTAACGAATGCATACGACCCGCGCCTGTGTGGATTTCTTTCAC
CTTCCATTGGCGTAGGCACTGAACCTCTTCCACAATGACTCTTGCAATTG
TTGATCATATTTTATGTTCCGTTTCATCGACGAGCACGGCCACCCCCCAA
CGAACCCCACAAAAAAACGTGCCGTTTTCATGCGTGCATGCGTGAACAGG
CAGAAGTTCGACCGCATCATCATCGACACCGCGCCTACGGGCCACACGCT
GAGGCTTCTCGGCTTCCCCGACTTCCTCGATAACTTCTTGGAAAAGGCGA
GTGGCTCGCTCTCTCGCTCTCGAAAGCTCTCCAAAATGACGGTGGTGTCA
GGCTCGGCGCTTTTGTTACCTCCCGCTGCGGGCGCAAGCACTATCACGGG
CGCCGCGTATACCGCCCGCTTGCCTGTCGCTCTCAGTTTGTTTTATGTGC
AGCATTTTTTTTCTGTACTACCGCCCGCTTGCCTGTCGCTCTCAGTTTGT
TTTATGTACAGCATTTTTTTTCTATACTCCCCATGACAGAGGCGAGCCCT
CGCGCCATGAAGCCAGGGACCAACCAGTGACACATTTGCTCGCGCTTCTA
CAAACAGGTGATACAGCTCCGCGGCAGGATGGGGGGTATCCTGAACCTGC
TGACGGGCATGTTCGGGGGCGGGACTAACGTGGTGGAGAAGGCGGACATG
GCCGTCGAGAAGCTGCAGGGCTACAAGGAAAGAATGGTG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10128:463..4701-

>mRNA_E-fasciculatus_F_contig10128.132.1 ID=mRNA_E-fasciculatus_F_contig10128.132.1|Name=mRNA_E-fasciculatus_F_contig10128.132.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1722bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10128:463..4701- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCGCACCCGCCAGCCCTGAGGATGCGCCAATCCTTGCCGACTGCCCT
GCTGTCCTTGGCGTACCTAACCGCAAGCACCACCGCTTTCGTGCTCGGTC
CGCTGCGTGCATCACGTGTCACGTCCGCCAATAATCGCCGAGCCTTGCTT
CCGGCAGCGGCGGCCTACCGACGATTGACCGCCGCTTCGCAACAGCAGCG
GCGCTGTCCGGCCTCCACGCGTCTCCTGGCGGGATCGGCATCATCATCAG
CGTTGACACCAACAGCGCCACATGCTGCTGGCCTGCGCAAGGCGAGGAGC
AGTAGAGGTGGCGGTGTTCGCTCGCTGAAGAGCGTGGCATCTCCGGCAGG
TCTGGAGAAAGGCGTCTCCGCCCGTGGACTGGAAGAGCTGCTGGAGGCAA
GGAACGGGGTTAACGAGCGCTTCGTCTTCTTTGGCGGCAAGGGCGGTGTC
GGCAAGACGTCCACGGCCGCCGCCGTCGCGATCCAGTGTGCTGATGCCGG
GCTAAGATGCCGCACCCGCCAGCCCTGAGGATGCGCCAATCCTTGCCGAC
TGCCCTGCTGTCCTTGGCGTACCTAACCGCAAGCACCACCGCTTTCGTGC
TCGGTCCGCTGCGTGCATCACGTGTCACGTCCGCCAATAATCGCCGAGCC
TTGCTTCCGGCAGCGGCGGCCTACCGACGATTGACCGCCGCTTCGCAACA
GCAGCGGCGCTGTCCGGCCTCCACGCGTCTCCTGGCGGGATCGGCATCAT
CATCAGCGTTGACACCAACAGCGCCACATGCTGCTGGCCTGCGCAAGGCG
AGGAGCAGTAGAGGTGGCGGTGTTCGCTCGCTGAAGAGCGTGGCATCTCC
GGCAGGTCTGGAGAAAGGCGTCTCCGCCCGTGGACTGGAAGAGCTGCTGG
AGGCAAGGAACGGGGTTAACGAGCGCTTCGTCTTCTTTGGCGGCAAGGGC
GGTGTCGGCAAGACGTCCACGGCCGCCGCCGTCGCGATCCAGTGTGCTGA
TGCCGGGCTAAGGACGCTGGTCATCAGCACCGACCCGGCGCACTCCCTGG
GCGACGCGTTGGACCAGGACATTTCCGGCGGAGAGCCCGTGAGGGTGATC
GGCTTGGACAACCTCTCGGCTATGGAGGACGCTGGTCATCAGCACCGACC
CGGCGCACTCCCTGGGCGACGCGTTGGACCAGGACATTTCCGGCGGAGAG
CCCGTGAGGGTGATCGGCTTGGACAACCTCTCGGCTATGGAGGTGGATAC
TGTCGAAGCTGTCAAGGAGTTCGAGGAGGCCTTGTCCAGCTTTGACATAT
CGGGGATGGCTGAGGAAATGGGCGTGCCTAAGGACATGGTGGAGGTGGAT
ACTGTCGAAGCTGTCAAGGAGTTCGAGGAGGCCTTGTCCAGCTTTGACAT
ATCGGGGATGGCTGAGGAAATGGGCGTGCCTAAGGACATGGTGGAGAGTC
TTGGCCTTTCGGAGTTCAGCGAGGTGTTGGCCAACCCGCCCCCGGGGATT
GATGAGCTGGTGGCCCTCTCGAGGGTTCTCAAGCTGGCCCGTTCGGAAGA
AGTCTTGGCCTTTCGGAGTTCAGCGAGGTGTTGGCCAACCCGCCCCCGGG
GATTGATGAGCTGGTGGCCCTCTCGAGGGTTCTCAAGCTGGCCCGTTCGG
AAGATGACACATTTGCTCGCGCTTCTACAAACAGGTGATGACACATTTGC
TCGCGCTTCTACAAACAGGTGA
back to top