mRNA_E-fasciculatus_F_contig10128.132.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: D7FUN3_ECTSI (Arsenite translocating ATPase like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN3_ECTSI) HSP 1 Score: 415 bits (1066), Expect = 4.510e-140 Identity = 242/286 (84.62%), Postives = 247/286 (86.36%), Query Frame = 1 Query: 1 MPHPPALRMRQSLPTALLSLAYLTAS-TTAFVLGPLRASRVTSANNXXXXXXXXXXXXXXXXXXXXXXXX----PASTRLLAGSASSSALTPTAPHAAGLRKARSSRGGGVRSLKSVASPAGLEKGVSARGLEELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEDDTFAR 843
MPHPPALRM QSLPTALLSLAYLTAS TTAFVLGPLRASRVTSA+N P STRLLAGSASS ALTPTAP A GLRKARSSR GGVRSLKSVA+PAGLEKGVSARGL ELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQD+SGGEPVR+IGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSE+ F R
Sbjct: 1 MPHPPALRMCQSLPTALLSLAYLTASSTTAFVLGPLRASRVTSASNRRALLPAAAAYRRLTSASQHQQRPQRRCPTSTRLLAGSASS-ALTPTAPQA-GLRKARSSRSGGVRSLKSVAAPAGLEKGVSARGLGELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEEQKFDR 284
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A7S0NW41_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NW41_9EUKA) HSP 1 Score: 150 bits (380), Expect = 1.860e-37 Identity = 81/152 (53.29%), Postives = 111/152 (73.03%), Query Frame = 1 Query: 367 SARGLEELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMG-VPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLAR 819
+ R L +LLE R+ +R +F GGKGGVGKTST++A+A++CAD GL TL++STDPAHSL DAL QD+SGG PV V+G LSAMEV+T +AV+ F EA+ F + + +G V ++ + LGL EF+++L N PPG+DEL+AL+ VL R
Sbjct: 35 ATRPLAQLLE-RDSTQQRLIFVGGKGGVGKTSTSSAIALRCADKGLSTLIVSTDPAHSLSDALVQDVSGGSPVLVMGCMGLSAMEVETDKAVERFREAVGGFRAADLG--LGSVAEEAIGKLGLDEFADILDNTPPGLDELLALTEVLSFVR 183
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A8J6C886_DIALT (Uncharacterized protein n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C886_DIALT) HSP 1 Score: 151 bits (381), Expect = 4.680e-37 Identity = 82/152 (53.95%), Postives = 111/152 (73.03%), Query Frame = 1 Query: 379 LEELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSF-----DISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLAR 819
L ++L+ +G +RFV GGKGGVGKTSTA+A+AI+CA +GLRTLV STDPAHSLGDAL D++GG+PV V GLD L A+E+D EA+ F AL++F + G+AEE+ + LGL EF+++L PPPG+DEL+AL+ V++L R
Sbjct: 57 LADVLDT-SGAAQRFVLVGGKGGVGKTSTASALAIRCAQSGLRTLVASTDPAHSLGDALQLDLAGGKPVAVPGLDGLDALEIDPSEAIGRFRAALAAFRPADLGLGGLAEEL------LSQLGLDEFADILDEPPPGLDELLALAEVIELTR 201
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A0G4GDI4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GDI4_9ALVE) HSP 1 Score: 148 bits (374), Expect = 3.660e-36 Identity = 85/159 (53.46%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 376 GLEELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDI--------SGGE----PVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLA 816
G +LL + G ++ V FGGKGGVGKT++AAA A+Q ADAG RTLV+STDPAHSLGDAL QDI GE PV V G NL A+EVD AV+EF +AL D++ MAE++G+ +ESLGL + +L +PPPGIDELV ++ VL+LA
Sbjct: 10 GFSDLLSPK-GAGQKIVLFGGKGGVGKTTSAAAAAVQLADAGFRTLVVSTDPAHSLGDALGQDIMYAKGAAEETGELSAAPVAVSGCANLWALEVDASGAVREFRDALKKIDLNDMAEKLGIDPSTLESLGLEDLVRLLDSPPPGIDELVGIANVLQLA 167
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A7S2B6R7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6R7_9STRA) HSP 1 Score: 147 bits (372), Expect = 5.640e-36 Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 1 Query: 385 ELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGE--PVRVIGLD-NLSAMEVDTVEAVKEFEEALSSFDISGMAEEMG--VPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSED 828
ELL G RFVF GGKGGVGKTS ++A+A+ ADAGLRTLV+S DPAHSLGD L D+ G V + G D NL AME+D ++KEF +A++ FD++ +A+E+G D +LGL EF+ +L NPPPG+DELVAL+ V++LAR D
Sbjct: 52 ELLSPPAGEGLRFVFVGGKGGVGKTSCSSAIAVTLADAGLRTLVVSVDPAHSLGDVLATDLPRGSNNAVPIFGCDDNLYAMEIDAEASLKEFTDAIAGFDLAAVAKEIGGQAGADFASNLGLDEFAGILRNPPPGVDELVALNAVVRLARGTD 204
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A7R9U218_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U218_9STRA) HSP 1 Score: 147 bits (372), Expect = 5.660e-36 Identity = 78/137 (56.93%), Postives = 100/137 (72.99%), Query Frame = 1 Query: 406 GVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLA 816
G ++ VF GGKGGVGKTSTAAA+ + AD GL TLV+STDPAHSLGDAL QD+ GG+ V V G NL A+EVD AV+EF+EAL + D +A +G+P+D+V LGL + + VL PPG+DELV+L+ V+ LA
Sbjct: 7 GGQQQLVFLGGKGGVGKTSTAAALGVTMADRGLSTLVLSTDPAHSLGDALGQDVGGGDAVLVQGTTNLYALEVDGERAVREFQEALEALDAKKIAVTLGLPEDVVAKLGLEDLAGVLNTTPPGLDELVSLAAVIDLA 143
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A7S0HAT0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HAT0_9EUKA) HSP 1 Score: 140 bits (352), Expect = 5.470e-35 Identity = 76/146 (52.05%), Postives = 105/146 (71.92%), Query Frame = 1 Query: 382 EELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLAR 819
EE L+A +RFVF GGKGGVGKTST++++A++ AD+GL TL++STDPAHSL DAL QD+ GG+PV V G++ L AMEV T EA + F A+ F S + GV +++V LGL + ++VL + PPG+DEL+AL+ VL L +
Sbjct: 160 EETLKADG---DRFVFVGGKGGVGKTSTSSSIAVRLADSGLSTLIVSTDPAHSLSDALMQDVGGGKPVVVNGVEGLEAMEVSTEEAAERFRSAIGGFRASDLGLG-GVAEELVSKLGLDDLADVLDSIPPGLDELLALAEVLALVQ 301
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A7S3E7S7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E7S7_9RHOD) HSP 1 Score: 141 bits (355), Expect = 1.520e-34 Identity = 80/159 (50.31%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 370 ARGLEELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSF-DISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEDDTFAR 843
+ G LLE+++ +RFVF GKGGVGKT++++A+A++ A GL+TLV+STDPAHSLGD LD D+S GE + + DNLSA+EVDT EAV+EF+ +SS ++S K++ LGL EF EVL PPG DE VAL +VL+LA D + R
Sbjct: 56 SNGFNRLLESKD---QRFVFVSGKGGVGKTTSSSAMAVRFAAEGLKTLVLSTDPAHSLGDCLDVDLSSGEIIPIT--DNLSALEVDTAEAVEEFKRTISSLNELSEEDRAKSGAKELANRLGLGEFGEVLTTLPPGADEFVALVKVLRLAEEADQGYER 209
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: A0A0G4FEQ3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FEQ3_VITBC) HSP 1 Score: 142 bits (359), Expect = 3.790e-34 Identity = 77/152 (50.66%), Postives = 108/152 (71.05%), Query Frame = 1 Query: 379 LEELLEARNG-VNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISG--GEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSE 825
L +LL+A G + R + FGGKGGVGKT+TAAA A++ AD GLRTL+ISTDPAHSLGDAL Q + E V G+DNL A+EVD +AV E + AL +FD ++ ++G+ ++E +G+ + ++ NPPPGIDELVA+++VL+L R +
Sbjct: 62 LNDLLQAPGGSTSTRLILFGGKGGVGKTTTAAATAVRFADEGLRTLIISTDPAHSLGDALGQQLHAPPDEMTAVEGVDNLWALEVDAGQAVIEMKAALETFDAIELSRKLGIGTTVLEGIGIGDMVKLFENPPPGIDELVAIAKVLQLTRGK 213
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Match: R1FYY7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FYY7_EMIHU) HSP 1 Score: 142 bits (357), Expect = 4.130e-34 Identity = 75/151 (49.67%), Postives = 108/151 (71.52%), Query Frame = 1 Query: 400 RNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRVIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLAR-SEDDTFARAS 849
++G +R + GGKGGVGKTS+++A+A++ AD GL TL++STDPAHSL DAL QD+SGG PV V G +NL AMEV+T +AV F A+S F + + G+ ++++ LGL EF+++L N PPG+DEL+AL+ L + R +E D+ AS
Sbjct: 3 QSGAAQRLILVGGKGGVGKTSSSSAIAVRLADTGLSTLIVSTDPAHSLSDALMQDVSGGSPVGVAGCENLQAMEVETADAVDRFRAAVSGFRAADLGLG-GLAEEVLGQLGLDEFADILDNVPPGLDELLALAETLAVVRGAEPDSDGAAS 152 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10128.132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10128.132.1 >prot_E-fasciculatus_F_contig10128.132.1 ID=prot_E-fasciculatus_F_contig10128.132.1|Name=mRNA_E-fasciculatus_F_contig10128.132.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=287bp MPHPPALRMRQSLPTALLSLAYLTASTTAFVLGPLRASRVTSANNRRALLback to top mRNA from alignment at E-fasciculatus_F_contig10128:463..4701- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10128.132.1 ID=mRNA_E-fasciculatus_F_contig10128.132.1|Name=mRNA_E-fasciculatus_F_contig10128.132.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4239bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10128:463..4701- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10128:463..4701- >mRNA_E-fasciculatus_F_contig10128.132.1 ID=mRNA_E-fasciculatus_F_contig10128.132.1|Name=mRNA_E-fasciculatus_F_contig10128.132.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1722bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10128:463..4701- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |