mRNA_E-fasciculatus_F_contig11383.1110.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11383.1110.1
Unique NamemRNA_E-fasciculatus_F_contig11383.1110.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 4.350e-80
Identity = 223/226 (98.67%), Postives = 224/226 (99.12%), Query Frame = 1 
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQ 672
            YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI  ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALI+LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQ
Sbjct:  145 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIVQARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALIMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQ 370
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BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A6H5L0W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W4_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 9.760e-77
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 1 
Query:   61 KARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQARESTL 690
            +ARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALI+LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQARE TL
Sbjct:    4 QARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALIMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQAREPTL 213
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BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A835YM25_9STRA (PRP1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM25_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.910e-51
Identity = 175/227 (77.09%), Postives = 193/227 (85.02%), Query Frame = 1 
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQG-KPHMVDKIIEMAISSLRQFQ 672
            YLTDLNSLKI+SDAEVGDIEKARLL++SVTSTNPKHGPGWIAAAR+EE+AGK+  ARK IK GCE CPDNEDVWLE ARLQTP+NAKTVLANA+R+LP SVKI     +LET    K++    XXXXXXXXXXXXXXX   E V+DA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE+QG    + DKIIE A++SLRQ+Q
Sbjct:  134 YLTDLNSLKINSDAEVGDIEKARLLMRSVTSTNPKHGPGWIAAARLEEYAGKLVAARKVIKQGCETCPDNEDVWLEAARLQTPDNAKTVLANAVRHLPGSVKIXXXXXDLETDATKKRIVLRRXXXXXXXXXXXXXXXIELEDVDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESQGASAEVADKIIERALASLRQYQ 360
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BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A7S4LDX4_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LDX4_9EUGL)

HSP 1 Score: 165 bits (417), Expect = 4.000e-47
Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 1 
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIA--RKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASK 345
            YLT+LNS+KI++D+E+GD+++ARLLLKSVT+TNP HGPGWIAAARVEE AG+IA  RK I  GCE CP +EDVWLE  RLQTP NAK VLA A+  LP SVK+W++AA LE T+  K
Sbjct:    8 YLTNLNSMKITNDSEIGDLKRARLLLKSVTTTNPHHGPGWIAAARVEEIAGRIAVARKIIAEGCETCPMSEDVWLEAVRLQTPANAKIVLAKAVEKLPHSVKLWIQAAALEHTDVQK 124
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BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A7S3LP65_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LP65_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.470e-46
Identity = 82/118 (69.49%), Postives = 102/118 (86.44%), Query Frame = 1 
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKK 348
            YLTDLNSL+++S AE+GDI+KARLL KSVTSTNPKH PGWIAAAR+EE AGK+  AR  I+ GCEACP++EDVWLE ARLQT ++AK VLANA+R++P SVK+WL AA+LE++N + K
Sbjct:  129 YLTDLNSLRVNSSAEIGDIKKARLLYKSVTSTNPKHAPGWIAAARLEEVAGKLLQARVLIQKGCEACPESEDVWLEAARLQTAQHAKAVLANAVRHIPRSVKLWLHAADLESSNPTNK 246
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BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A7S3XY73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY73_HETAK)

HSP 1 Score: 171 bits (434), Expect = 7.810e-46
Identity = 172/226 (76.11%), Postives = 190/226 (84.07%), Query Frame = 1 
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQ 672
            YLTDLNSLKISSDAEVGDIEKARLLL SV  TNP+HGP WIA+ARVEE+AGK+  ARK I+ GCEACPD EDVWLE ARL  P+NAK +LA+A++ LP SVK     A+LE    +KKV XXXXXXXXXXXXXXXXXXXXX  V DA +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQG    VD+I+E A++SLRQ+Q
Sbjct:   47 YLTDLNSLKISSDAEVGDIEKARLLLASVRRTNPRHGPAWIASARVEEYAGKVVQARKVIREGCEACPDAEDVWLEAARLHPPQNAKAILASAVQRLPASVKXXXXXADLEADAPAKKVVXXXXXXXXXXXXXXXXXXXXXXNVADAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGNAPTVDRIVEKAVASLRQYQ 272
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BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: R1E6U8_EMIHU (PRP1_N domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E6U8_EMIHU)

HSP 1 Score: 172 bits (435), Expect = 1.460e-45
Identity = 83/112 (74.11%), Postives = 98/112 (87.50%), Query Frame = 1 
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELET 330
            YLTDLNS+K+S++AE+GDI+KARLLLKSVT TNP HGPGWIAAAR+EE AGK+  AR+ I+ GC AC  NEDVWLE ARLQTPENAK VLA+AI+ +PTSVKIWL+AA LE+
Sbjct:  250 YLTDLNSVKVSTEAEIGDIKKARLLLKSVTQTNPGHGPGWIAAARLEEVAGKLVAARQIIREGCRACAANEDVWLEAARLQTPENAKVVLADAIKKIPTSVKIWLQAASLES 361
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BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: F0VZ29_9STRA (Uncharacterized protein AlNc14C1G170 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZ29_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.950e-45
Identity = 85/119 (71.43%), Postives = 99/119 (83.19%), Query Frame = 1 
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKV 351
            YLTDLNSLKI+SD E+GDI+KARLLL SVT TNPKHGPGWIAAAR+EE AGKI  ARK I+ GCE+C   EDVWLE AR Q+PENA+ VLA AIR++PTS+KIWL+AA+LE     KK+
Sbjct:  316 YLTDLNSLKITSDVEIGDIKKARLLLHSVTMTNPKHGPGWIAAARLEEVAGKIVQARKLIRQGCESCSTQEDVWLEAARFQSPENARGVLAKAIRHVPTSIKIWLQAAKLENDIDLKKL 434
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BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A7S1U7V1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7V1_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.370e-44
Identity = 81/118 (68.64%), Postives = 100/118 (84.75%), Query Frame = 1 
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIA--RKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKK 348
            YLTDLNS+ + SDAEVGDI+KA+LLLKSVTSTNP+H PGWIAAARVEE+AGKIA  R+ I+ GCE CP+ EDVWLE ARL + +NAK +LA+A++++PTSVKIWL+AA+LE     KK
Sbjct:  196 YLTDLNSVTLRSDAEVGDIKKAQLLLKSVTSTNPRHAPGWIAAARVEEYAGKIAQARRKIREGCEKCPEAEDVWLEAARLHSGDNAKAILADAVKHVPTSVKIWLKAADLEPDAERKK 313
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BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A8H7SJU0_9FUNG (PRP1_N domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SJU0_9FUNG)

HSP 1 Score: 164 bits (415), Expect = 2.920e-43
Identity = 79/118 (66.95%), Postives = 94/118 (79.66%), Query Frame = 1 
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKK 348
            YLTDLNS+ + SDAE+GDI+KARLLL SV +TNPKH PGWIAAAR+EE AG+   AR TI  GCE CP NEDVWLE ARL T +NAK +L +A+R+LP SVKIWL+A  +ET N +KK
Sbjct:  243 YLTDLNSVVVKSDAEIGDIKKARLLLNSVITTNPKHAPGWIAAARLEEVAGRPVHARNTIAKGCEQCPKNEDVWLEAARLNTVDNAKIILGDAVRHLPQSVKIWLKAVSMETDNKAKK 360
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHD2_ECTSI4.350e-8098.67PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L0W4_9PHAE9.760e-7798.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YM25_9STRA1.910e-5177.09PRP1_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S4LDX4_9EUGL4.000e-4767.52Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S3LP65_9STRA3.470e-4669.49Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S3XY73_HETAK7.810e-4676.11Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R1E6U8_EMIHU1.460e-4574.11PRP1_N domain-containing protein n=1 Tax=Emiliania... [more]
F0VZ29_9STRA2.950e-4571.43Uncharacterized protein AlNc14C1G170 n=1 Tax=Albug... [more]
A0A7S1U7V1_9STRA2.370e-4468.64Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8H7SJU0_9FUNG2.920e-4366.95PRP1_N domain-containing protein n=1 Tax=Thamnidiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11383contigE-fasciculatus_F_contig11383:491..4051 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score265.8
Seed ortholog evalue1.9e-68
Seed eggNOG ortholog2880.D7FHD2
KEGG koko:K12855
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
GOsGO:0000244,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0003824,GO:0004553,GO:0004565,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005682,GO:0005684,GO:0005737,GO:0005773,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006403,GO:0006725,GO:0006807,GO:0006950,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008380,GO:0009266,GO:0009409,GO:0009628,GO:0009791,GO:0009845,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0015030,GO:0015925,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0016607,GO:0016787,GO:0016798,GO:0019219,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030312,GO:0030532,GO:0031047,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0034622,GO:0034641,GO:0035257,GO:0035258,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046540,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050681,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051427,GO:0060147,GO:0060148,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0065003,GO:0065007,GO:0070013,GO:0070920,GO:0071005,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0080188,GO:0090304,GO:0090351,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:0140110,GO:1901360,GO:1901363,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1903798,GO:1903800,GO:1990904,GO:2000112,GO:2000628,GO:2000630,GO:2000634,GO:2000636,GO:2000637,GO:2001141
EggNOG free text desc.spliceosomal tri-snRNP complex assembly
EggNOG OGsKOG0495@1,KOG0495@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Hectar predicted targeting categoryother localisation
Exons5
Model size693
Cds size693
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11383.1110.1prot_E-fasciculatus_F_contig11383.1110.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11383 491..4051 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927647.777123-CDS-E-fasciculatus_F_contig11383:490..5531622927647.777123-CDS-E-fasciculatus_F_contig11383:490..553Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11383 491..553 +
1695995634.118155-CDS-E-fasciculatus_F_contig11383:490..5531695995634.118155-CDS-E-fasciculatus_F_contig11383:490..553Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11383 491..553 +
1622927647.789389-CDS-E-fasciculatus_F_contig11383:1349..14451622927647.789389-CDS-E-fasciculatus_F_contig11383:1349..1445Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11383 1350..1445 +
1695995634.1376307-CDS-E-fasciculatus_F_contig11383:1349..14451695995634.1376307-CDS-E-fasciculatus_F_contig11383:1349..1445Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11383 1350..1445 +
1622927647.8007329-CDS-E-fasciculatus_F_contig11383:2057..22461622927647.8007329-CDS-E-fasciculatus_F_contig11383:2057..2246Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11383 2058..2246 +
1695995634.1481285-CDS-E-fasciculatus_F_contig11383:2057..22461695995634.1481285-CDS-E-fasciculatus_F_contig11383:2057..2246Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11383 2058..2246 +
1622927647.8107257-CDS-E-fasciculatus_F_contig11383:3370..35651622927647.8107257-CDS-E-fasciculatus_F_contig11383:3370..3565Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11383 3371..3565 +
1695995634.1582367-CDS-E-fasciculatus_F_contig11383:3370..35651695995634.1582367-CDS-E-fasciculatus_F_contig11383:3370..3565Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11383 3371..3565 +
1622927647.8208017-CDS-E-fasciculatus_F_contig11383:3901..40511622927647.8208017-CDS-E-fasciculatus_F_contig11383:3901..4051Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11383 3902..4051 +
1695995634.1683102-CDS-E-fasciculatus_F_contig11383:3901..40511695995634.1683102-CDS-E-fasciculatus_F_contig11383:3901..4051Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11383 3902..4051 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11383.1110.1

>prot_E-fasciculatus_F_contig11383.1110.1 ID=prot_E-fasciculatus_F_contig11383.1110.1|Name=mRNA_E-fasciculatus_F_contig11383.1110.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=231bp
YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFA
GKIARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVK
IWLRAAELETTNASKKVVLRRALEFVPNSVKLWKTAIELEGVEDALILLG
RAVECVPHSVDMWLALARLETYENAQKVLNRAREAIPTEPAIWITASKLE
EAQGKPHMVDKIIEMAISSLRQFQARESTL*
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mRNA from alignment at E-fasciculatus_F_contig11383:491..4051+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11383.1110.1 ID=mRNA_E-fasciculatus_F_contig11383.1110.1|Name=mRNA_E-fasciculatus_F_contig11383.1110.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3561bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11383:491..4051+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TACCTGACGGACCTCAACTCCTTGAAGATTAGCAGCGATGCCGAGGTTGG
AGACATCGAAAAGGTGAGAACATCACACCACACCACACCATCTCCGTTTA
TGAGACTTGAACGAGCACACTGCCGCCCAATGTGCAACAGGTAGTATTTG
CGTCGAGACATGCCGATATTCTCTCTCCCTTCATTGTTGCTGTTGTTGGA
GCATGTCAACTTGTGGGGGAATCTGCAACAAGTGATACTTGCATCGAGAC
GTGTTGGTGATCTCGAATCCTTTCTTGTTCTTGTGATTTTGGTTGGAGCA
TGTCAGCTTGTGTGGGGAATGAGAACGGTGCCCTGCTCACGGTGGTGTCA
TCTTGAAGGCTGGGGCATTGATCTGGATAGATAGACAGCACGCACACTTG
TCACTCAAGCACTGTTGTTGGTGTTGTTGTTGTTGTTAGACTTGGCTCGC
TCCTACGACTAGTTTTTTTGGCGCGGTCTCAGCTCATCTTGAACGATGAT
ATATATACACCTTGCCGAGAACTCCTTTTCAGGTGTCTTCACTGCTGTCT
ACATCCAAACGACGCGATCTGATTAGCCTACCAAGCTGACGCCCCAGAAC
AATCATAACCGCATGCAACACGACCCACGCAACTCCCCCCTCCCCGAGTA
TCGTTTCATCTCCGCCTTTCCTTACTCTCTGTCCTTCGCGATATTCGGCG
AAACGTCTCCATGCGCTGAGTAGAGTAAACTCTCCCCCTTTCCTTACCTC
TCCGCCCCTTCTCAATGTGCGTCGAAACGTCTCGGTGCTCCGGGGGATTG
GTTCCCTAATCGCATCCTCTGTGTCTTTGGAACTCCCTTCCCCTGCCATG
TGCCGCCAGGCGAGGCTCCTTCTTAAGAGCGTCACGTCCACCAACCCCAA
GCACGGGCCCGGCTGGATCGCGGCCGCGCGCGTGGAAGAGTTCGCCGGCA
AGATCGTCCAGGCAAGGATAAGCTTGCTTTTGCCGGATGGGACGTGATCA
CGGCCACAGCCGGTGGTAGGTAGCCGTACGCGAGTCCGTCCTCAATCTTA
CGCCTTAATCGTGGCCTTTTTTACTACGAACGCAAACCTATTAAACTATT
GACGATCGCTAGGCCCATAAGACGACCAAGGCGGGTGGCGAGGCATATAC
CCTGATTACTTTTCGCAGATAAGTAGTCCGACACCAACCGTAAAATCCCT
GTGAAGAAACAGTCGCGCGCGATCACTGATGCTGTAGGCCCGTTATGACT
TTCCTTGTCGGAGCACCGGCTGGTCCGATCGCCAACCGTACACGCCGTGA
AGAAACCTTCCACTAGGTCCGCAGCTCGTAGCCCTATGTAGCGAGTCTAC
ACCCGCCAACGCCATGCCTTGTCGCATCCTTAAACAGTCCTAACAACATG
CGTCGTCCATATGAAAAACCCTTCCTCCTGGTATGATCACACTAGGCCTG
TAAGGGGGGAAAGGCTGGGTTGCGAAGGATGCCCCGAGCCCTTGTCGTAG
CCCTACATAGCCCAAACGTTCACCGTACGCCCCATAAAACCCTTCTGCTG
CGATCACGCCAAAATAGGCCCGTAAGACGATCAAGGCGGGTTGCGAGGCG
TGTCCCGATAACGAGGATGTCTGGCTGGAGGGCGCCCGGCTGCAGACGCC
GGAGAACGCCAAGACCGTTCTGGCGAACGCTATTCGGAACCTGCCCACGA
GCGTCAAGATCTGGCTCAGGGCGGCGGAGCTGGAGACGACCAACGCGTCC
AAGAAGGTGGGCGAGCGAACGAACCCCTGTGTGTGTCTTTTGCATCAAGA
TAGAGGTGGCGTAGTTGTTGTTGCTGTTTTTCTCACGTTTGCTCTAGCCT
ACAATAATGGGAAGCCCGCGGTCGCAAAAAAAACACGGCATACACGACGC
CCCGAAAGAAGCAAAACAAAATATAGGGTGCAAACCACTCGGAAGAGAAA
ACAAAAGTGTGTGTCAGCAGCGTGGTTGCTGGTACGACAGCAGTGTTGTT
GGGTCGATTTGGGCAGAAATACGGGTGTCGGGGTTTGGTTGGGGGCGTCC
ATCGTCGTTTTTTTTTTTTCCAGAACCAAACTGTGACCCCCGCTGGTCGA
GTCCAGAAACTGTACCGAGAGGTGTATTGACCGACGCCCAGCATAACTGG
GATGAAAATAAATAATGCCCTCCAGGAGCGCTTGAACACCCCAATCTTGC
TCTCAGACGATGACTGCCCATCGTATCCTCAAACAATGACGGAGGCATGT
TTTTTTCCCCACCGATTTGTTACGCTCGGCGCACTCTCATGTCTCCTGCC
CCCCTCGTTCCGAATTTGGTTTTGCGGAAGAAACTCGTACCCCCCGCTGA
TGATGCGGTATGCGTGGATGGCCGGTCAAGCCTCTTCGGTTGTCGACAAA
TAGCAACGGACCACCCCCCGTCCCCCCTTCTACGTCAACGCCACCGCCAC
CTGCCATGAAGATATGTAATATTCAGAAGATTGCCAACATGTAAAGGCAA
CGAGTGAACGCCGCCACGAAGACATGAAACAGCCACAGCAGTTCGGAAGA
TTGCCAACGCGTGAGCATTGGCCCAGACGGAAAATGGCGACGCCTTTCCC
CCCAACCCCTCTGCTGGCCGGCCGCCTCCTCATCACGGGGCGCTGGCTAA
TGAAACGACTGCTATTTACTAGAGGATATGTGTTCCTTGCCCAGATGGCT
AATCGCGGAAGCCTCTTCCCCAACCCCGCCTGCTATCTCCTCATAATCTC
GGGGCATTGACTGCCATTGTTGGTGCTGAGACGACTCGGAAACGTCTCGA
ACGGTTACAGCAATCTTTCTCGGTGTTTTTGTATGTAGAATACTTTCTAA
ACACGACTGACTGCTGTTTCGTTTCATCAGGTGGTTCTCAGGCGAGCGCT
GGAGTTCGTGCCCAACTCCGTGAAGCTCTGGAAGACGGCGATCGAGCTTG
AGGGTGTGGAGGACGCCTTGATCCTGCTCGGTAGGGCGGTGGAGTGCGTG
CCGCACAGCGTGGACATGTGGCTCGCGCTGGCCCGCCTCGAGACGTACGA
GAACGCGCAGAAGGTTCTCAACAGGGTGAGCAGCAGCGGAATAATGAAGG
TTTTTGCTGGCCGTTGTTGTGGTCAACAGCGGTATATTTGTATTGACGTT
TGCCGCTGCTGCTGCTGCTGCTGCTGCTGCTACTGTTGTAGGGTGGTGAT
GAGATTGGTGTGTGTGCTGATTGTCTCAGCGTGTACAGCAGTAGCCGCGT
TGTCCCTTCCTTGTGGTTCGGTGCTTGTTTCATTTGTTGGCAACGGTGCG
CAGATACGGAAAGGTTTTGGGTGCGCTTTTGATGGCACGGCACGAAGGTC
AGTATGACACAACACACAACACGGGAACACATGATGGCGTGACGTCGCGT
GATGCTGGCAGGCGCGAGAAGCGATCCCTACGGAACCGGCGATCTGGATT
ACCGCTAGCAAGCTGGAGGAGGCCCAGGGGAAGCCGCACATGGTGGACAA
GATCATCGAGATGGCCATCTCGTCCTTGAGGCAGTTCCAGGCGAGAGAGT
CGACGCTTTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11383:491..4051+

>mRNA_E-fasciculatus_F_contig11383.1110.1 ID=mRNA_E-fasciculatus_F_contig11383.1110.1|Name=mRNA_E-fasciculatus_F_contig11383.1110.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1386bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11383:491..4051+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TACCTGACGGACCTCAACTCCTTGAAGATTAGCAGCGATGCCGAGGTTGG
AGACATCGAAAAGTACCTGACGGACCTCAACTCCTTGAAGATTAGCAGCG
ATGCCGAGGTTGGAGACATCGAAAAGGCGAGGCTCCTTCTTAAGAGCGTC
ACGTCCACCAACCCCAAGCACGGGCCCGGCTGGATCGCGGCCGCGCGCGT
GGAAGAGTTCGCCGGCAAGATCGCGAGGCTCCTTCTTAAGAGCGTCACGT
CCACCAACCCCAAGCACGGGCCCGGCTGGATCGCGGCCGCGCGCGTGGAA
GAGTTCGCCGGCAAGATCGCCCGTAAGACGATCAAGGCGGGTTGCGAGGC
GTGTCCCGATAACGAGGATGTCTGGCTGGAGGGCGCCCGGCTGCAGACGC
CGGAGAACGCCAAGACCGTTCTGGCGAACGCTATTCGGAACCTGCCCACG
AGCGTCAAGATCTGGCTCAGGGCGGCGGAGCTGGAGACGACCAACGCGTC
CAAGAAGGCCCGTAAGACGATCAAGGCGGGTTGCGAGGCGTGTCCCGATA
ACGAGGATGTCTGGCTGGAGGGCGCCCGGCTGCAGACGCCGGAGAACGCC
AAGACCGTTCTGGCGAACGCTATTCGGAACCTGCCCACGAGCGTCAAGAT
CTGGCTCAGGGCGGCGGAGCTGGAGACGACCAACGCGTCCAAGAAGGTGG
TTCTCAGGCGAGCGCTGGAGTTCGTGCCCAACTCCGTGAAGCTCTGGAAG
ACGGCGATCGAGCTTGAGGGTGTGGAGGACGCCTTGATCCTGCTCGGTAG
GGCGGTGGAGTGCGTGCCGCACAGCGTGGACATGTGGCTCGCGCTGGCCC
GCCTCGAGACGTACGAGAACGCGCAGAAGGTTCTCAACAGGGTGGTTCTC
AGGCGAGCGCTGGAGTTCGTGCCCAACTCCGTGAAGCTCTGGAAGACGGC
GATCGAGCTTGAGGGTGTGGAGGACGCCTTGATCCTGCTCGGTAGGGCGG
TGGAGTGCGTGCCGCACAGCGTGGACATGTGGCTCGCGCTGGCCCGCCTC
GAGACGTACGAGAACGCGCAGAAGGTTCTCAACAGGGCGCGAGAAGCGAT
CCCTACGGAACCGGCGATCTGGATTACCGCTAGCAAGCTGGAGGAGGCCC
AGGGGAAGCCGCACATGGTGGACAAGATCATCGAGATGGCCATCTCGTCC
TTGAGGCAGTTCCAGGCGAGAGAGTCGACGCTTTGAGCGCGAGAAGCGAT
CCCTACGGAACCGGCGATCTGGATTACCGCTAGCAAGCTGGAGGAGGCCC
AGGGGAAGCCGCACATGGTGGACAAGATCATCGAGATGGCCATCTCGTCC
TTGAGGCAGTTCCAGGCGAGAGAGTCGACGCTTTGA
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