prot_E-fasciculatus_F_contig11383.1110.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11383.1110.1
Unique Nameprot_E-fasciculatus_F_contig11383.1110.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length231
Homology
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 4.350e-80
Identity = 223/226 (98.67%), Postives = 224/226 (99.12%), Query Frame = 0
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQ 224
            YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI  ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALI+LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQ
Sbjct:  145 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIVQARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALIMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQ 370          
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A6H5L0W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W4_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 9.760e-77
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0
Query:   21 KARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQARESTL 230
            +ARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALI+LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQARE TL
Sbjct:    4 QARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALIMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQAREPTL 213          
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A835YM25_9STRA (PRP1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM25_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.910e-51
Identity = 175/227 (77.09%), Postives = 193/227 (85.02%), Query Frame = 0
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQG-KPHMVDKIIEMAISSLRQFQ 224
            YLTDLNSLKI+SDAEVGDIEKARLL++SVTSTNPKHGPGWIAAAR+EE+AGK+  ARK IK GCE CPDNEDVWLE ARLQTP+NAKTVLANA+R+LP SVKI     +LET    K++    XXXXXXXXXXXXXXX   E V+DA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE+QG    + DKIIE A++SLRQ+Q
Sbjct:  134 YLTDLNSLKINSDAEVGDIEKARLLMRSVTSTNPKHGPGWIAAARLEEYAGKLVAARKVIKQGCETCPDNEDVWLEAARLQTPDNAKTVLANAVRHLPGSVKIXXXXXDLETDATKKRIVLRRXXXXXXXXXXXXXXXIELEDVDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESQGASAEVADKIIERALASLRQYQ 360          
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A7S4LDX4_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LDX4_9EUGL)

HSP 1 Score: 165 bits (417), Expect = 4.000e-47
Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 0
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIA--RKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASK 115
            YLT+LNS+KI++D+E+GD+++ARLLLKSVT+TNP HGPGWIAAARVEE AG+IA  RK I  GCE CP +EDVWLE  RLQTP NAK VLA A+  LP SVK+W++AA LE T+  K
Sbjct:    8 YLTNLNSMKITNDSEIGDLKRARLLLKSVTTTNPHHGPGWIAAARVEEIAGRIAVARKIIAEGCETCPMSEDVWLEAVRLQTPANAKIVLAKAVEKLPHSVKLWIQAAALEHTDVQK 124          
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A7S3LP65_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LP65_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.470e-46
Identity = 82/118 (69.49%), Postives = 102/118 (86.44%), Query Frame = 0
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKK 116
            YLTDLNSL+++S AE+GDI+KARLL KSVTSTNPKH PGWIAAAR+EE AGK+  AR  I+ GCEACP++EDVWLE ARLQT ++AK VLANA+R++P SVK+WL AA+LE++N + K
Sbjct:  129 YLTDLNSLRVNSSAEIGDIKKARLLYKSVTSTNPKHAPGWIAAARLEEVAGKLLQARVLIQKGCEACPESEDVWLEAARLQTAQHAKAVLANAVRHIPRSVKLWLHAADLESSNPTNK 246          
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A7S3XY73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY73_HETAK)

HSP 1 Score: 171 bits (434), Expect = 7.810e-46
Identity = 172/226 (76.11%), Postives = 190/226 (84.07%), Query Frame = 0
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKVXXXXXXXXXXXXXXXXXXXXXXEGVEDALILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGKPHMVDKIIEMAISSLRQFQ 224
            YLTDLNSLKISSDAEVGDIEKARLLL SV  TNP+HGP WIA+ARVEE+AGK+  ARK I+ GCEACPD EDVWLE ARL  P+NAK +LA+A++ LP SVK     A+LE    +KKV XXXXXXXXXXXXXXXXXXXXX  V DA +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQG    VD+I+E A++SLRQ+Q
Sbjct:   47 YLTDLNSLKISSDAEVGDIEKARLLLASVRRTNPRHGPAWIASARVEEYAGKVVQARKVIREGCEACPDAEDVWLEAARLHPPQNAKAILASAVQRLPASVKXXXXXADLEADAPAKKVVXXXXXXXXXXXXXXXXXXXXXXNVADAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQGNAPTVDRIVEKAVASLRQYQ 272          
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: R1E6U8_EMIHU (PRP1_N domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E6U8_EMIHU)

HSP 1 Score: 172 bits (435), Expect = 1.460e-45
Identity = 83/112 (74.11%), Postives = 98/112 (87.50%), Query Frame = 0
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELET 110
            YLTDLNS+K+S++AE+GDI+KARLLLKSVT TNP HGPGWIAAAR+EE AGK+  AR+ I+ GC AC  NEDVWLE ARLQTPENAK VLA+AI+ +PTSVKIWL+AA LE+
Sbjct:  250 YLTDLNSVKVSTEAEIGDIKKARLLLKSVTQTNPGHGPGWIAAARLEEVAGKLVAARQIIREGCRACAANEDVWLEAARLQTPENAKVVLADAIKKIPTSVKIWLQAASLES 361          
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: F0VZ29_9STRA (Uncharacterized protein AlNc14C1G170 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZ29_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.950e-45
Identity = 85/119 (71.43%), Postives = 99/119 (83.19%), Query Frame = 0
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKKV 117
            YLTDLNSLKI+SD E+GDI+KARLLL SVT TNPKHGPGWIAAAR+EE AGKI  ARK I+ GCE+C   EDVWLE AR Q+PENA+ VLA AIR++PTS+KIWL+AA+LE     KK+
Sbjct:  316 YLTDLNSLKITSDVEIGDIKKARLLLHSVTMTNPKHGPGWIAAARLEEVAGKIVQARKLIRQGCESCSTQEDVWLEAARFQSPENARGVLAKAIRHVPTSIKIWLQAAKLENDIDLKKL 434          
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A7S1U7V1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7V1_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.370e-44
Identity = 81/118 (68.64%), Postives = 100/118 (84.75%), Query Frame = 0
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKIA--RKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKK 116
            YLTDLNS+ + SDAEVGDI+KA+LLLKSVTSTNP+H PGWIAAARVEE+AGKIA  R+ I+ GCE CP+ EDVWLE ARL + +NAK +LA+A++++PTSVKIWL+AA+LE     KK
Sbjct:  196 YLTDLNSVTLRSDAEVGDIKKAQLLLKSVTSTNPRHAPGWIAAARVEEYAGKIAQARRKIREGCEKCPEAEDVWLEAARLHSGDNAKAILADAVKHVPTSVKIWLKAADLEPDAERKK 313          
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Match: A0A8H7SJU0_9FUNG (PRP1_N domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SJU0_9FUNG)

HSP 1 Score: 164 bits (415), Expect = 2.920e-43
Identity = 79/118 (66.95%), Postives = 94/118 (79.66%), Query Frame = 0
Query:    1 YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFAGKI--ARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVKIWLRAAELETTNASKK 116
            YLTDLNS+ + SDAE+GDI+KARLLL SV +TNPKH PGWIAAAR+EE AG+   AR TI  GCE CP NEDVWLE ARL T +NAK +L +A+R+LP SVKIWL+A  +ET N +KK
Sbjct:  243 YLTDLNSVVVKSDAEIGDIKKARLLLNSVITTNPKHAPGWIAAARLEEVAGRPVHARNTIAKGCEQCPKNEDVWLEAARLNTVDNAKIILGDAVRHLPQSVKIWLKAVSMETDNKAKK 360          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11383.1110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHD2_ECTSI4.350e-8098.67PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L0W4_9PHAE9.760e-7798.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YM25_9STRA1.910e-5177.09PRP1_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S4LDX4_9EUGL4.000e-4767.52Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S3LP65_9STRA3.470e-4669.49Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S3XY73_HETAK7.810e-4676.11Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R1E6U8_EMIHU1.460e-4574.11PRP1_N domain-containing protein n=1 Tax=Emiliania... [more]
F0VZ29_9STRA2.950e-4571.43Uncharacterized protein AlNc14C1G170 n=1 Tax=Albug... [more]
A0A7S1U7V1_9STRA2.370e-4468.64Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8H7SJU0_9FUNG2.920e-4366.95PRP1_N domain-containing protein n=1 Tax=Thamnidiu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 170..202
e-value: 0.021
score: 24.0
coord: 79..111
e-value: 0.012
score: 24.8
coord: 112..142
e-value: 200.0
score: 5.8
coord: 17..49
e-value: 0.23
score: 20.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 77..228
e-value: 2.0E-18
score: 68.7
coord: 10..76
e-value: 2.7E-6
score: 28.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 151..217
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 15..140
IPR027108Pre-mRNA-processing factor 6/Prp1/STA1PANTHERPTHR11246:SF1PRE-MRNA-PROCESSING FACTOR 6coord: 1..222
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11383contigE-fasciculatus_F_contig11383:491..4051 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11383.1110.1mRNA_E-fasciculatus_F_contig11383.1110.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11383 491..4051 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11383.1110.1 ID=prot_E-fasciculatus_F_contig11383.1110.1|Name=mRNA_E-fasciculatus_F_contig11383.1110.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=231bp
YLTDLNSLKISSDAEVGDIEKARLLLKSVTSTNPKHGPGWIAAARVEEFA
GKIARKTIKAGCEACPDNEDVWLEGARLQTPENAKTVLANAIRNLPTSVK
IWLRAAELETTNASKKVVLRRALEFVPNSVKLWKTAIELEGVEDALILLG
RAVECVPHSVDMWLALARLETYENAQKVLNRAREAIPTEPAIWITASKLE
EAQGKPHMVDKIIEMAISSLRQFQARESTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027108Prp6/Prp1/STA1
IPR011990TPR-like_helical_dom_sf
IPR003107HAT