prot_E-fasciculatus_F_contig1138.1107.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1138.1107.1
Unique Nameprot_E-fasciculatus_F_contig1138.1107.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length199
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1138.1107.1 vs. uniprot
Match: D7FTL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL5_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 8.290e-136
Identity = 193/198 (97.47%), Postives = 195/198 (98.48%), Query Frame = 0 
Query:    1 MGAPKLLGGVALVGSTVFYVLPMSMHVAFGADIPPSTYFGMAVLIGLPILGFIAFEMWKTLGDNRRIRKERRKLEAIEAQSFGCIQPQVLDSFVVFPVRVSKRGCAASSWVELGEQAVAVNLCAAVKISGAVDTEGPLRRLCEATFGSELDVIVYCGGGTAGPTGLAVGVGRQNFGPYLASRVAHSIKEAMRLGIQGQ 198
            MGAPKLLGGVALVGSTVFYVLPMSMHVAFGADIPPSTYFGMAVLIGLPILGFIAFEMWKTLGDNRR+RKERRKLE IEAQSFGCI+PQVLDSFVVFPVRVSKRGCA SSWVELGEQAVAVNLCAA KISGAVDTEGPLRRLCEATFGSELDVIVYCGGGTAGPTGLAVGVGRQNFGPYLASRVAHSIKEAMRLGIQGQ
Sbjct:    1 MGAPKLLGGVALVGSTVFYVLPMSMHVAFGADIPPSTYFGMAVLIGLPILGFIAFEMWKTLGDNRRVRKERRKLETIEAQSFGCIRPQVLDSFVVFPVRVSKRGCAGSSWVELGEQAVAVNLCAAAKISGAVDTEGPLRRLCEATFGSELDVIVYCGGGTAGPTGLAVGVGRQNFGPYLASRVAHSIKEAMRLGIQGQ 198
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BLAST of mRNA_E-fasciculatus_F_contig1138.1107.1 vs. uniprot
Match: A0A7S2V258_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V258_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.810e-21
Identity = 54/147 (36.73%), Postives = 85/147 (57.82%), Query Frame = 0 
Query:   46 GLPILGFIAFEMWKTLGDNRRIRKERRKLEAIEAQSFGCIQPQVLDSFVVFPVRVSKRGCAASSWVELGEQAVAVNLCAAVKISGAVDTEGPLRRLCEATFGSELDVIVYCGGGTAGPTGLAVGVGRQNFGPYLASRVAHSIKEAMR 192
            G  ++   A  ++K L   R  R+ +  +E++  Q++ CI  QVLDS VVFPV+V +R    S +  +GE+ V V L      S + D    L+ LC    GS+  V V+ G G +GPTGLAVG+ R+ +GP LA+ V  +I+++++
Sbjct:   71 GAIVVAVFAHSLYKDLKKKREWREYKHLVESVNEQTYQCITVQVLDSVVVFPVQVRRRDAPVSRFYRIGEEFVQVEL------SQSGDPTPLLQALCRDVIGSDFGVKVWVGAGKSGPTGLAVGIVREGYGPSLANHVGMAIEQSIQ 211
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1138.1107.1 vs. uniprot
Match: A0A7S4EDG4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDG4_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 7.020e-10
Identity = 52/146 (35.62%), Postives = 74/146 (50.68%), Query Frame = 0 
Query:   41 MAVLIGLPILGFIAFEMWKTLGDNRRIRKERRKLEAIEAQSFGCIQPQVLDSFVVFPVRVSKRGCAASSWVELGEQAVAVNLCAAVK-ISGAVDTEGPLRRLCEATF-----GSELDVIVYCGGGTAGPTGLAVGVGRQNFGPYLA 180
            +AV+ GL +L   A +  +     R  + +R    AI++Q+F C+ PQ    FVVFPVRV++RG AAS  V L    + V L    +  +G +DTE  LR L EA           +V+ + G    GPTGLA G+  +   P  A
Sbjct:  120 VAVVCGLILLFSYARDRRRDRARTRGAQSQR----AIKSQTFQCVAPQTPGEFVVFPVRVARRGVAASRVVSLDGDELRVELDTKQRDAAGRLDTEASLRSLLEAALLPRFPTGAAEVVTFYG---EGPTGLAGGLALRRGAPDFA 258
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1138.1107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTL5_ECTSI8.290e-13697.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V258_9STRA1.810e-2136.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4EDG4_9STRA7.020e-1035.62Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..198
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 39..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1138contigE-fasciculatus_F_contig1138:12904..19226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1138.1107.1mRNA_E-fasciculatus_F_contig1138.1107.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1138 11928..19226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1138.1107.1 ID=prot_E-fasciculatus_F_contig1138.1107.1|Name=mRNA_E-fasciculatus_F_contig1138.1107.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=199bp
MGAPKLLGGVALVGSTVFYVLPMSMHVAFGADIPPSTYFGMAVLIGLPIL
GFIAFEMWKTLGDNRRIRKERRKLEAIEAQSFGCIQPQVLDSFVVFPVRV
SKRGCAASSWVELGEQAVAVNLCAAVKISGAVDTEGPLRRLCEATFGSEL
DVIVYCGGGTAGPTGLAVGVGRQNFGPYLASRVAHSIKEAMRLGIQGQ*
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