mRNA_E-fasciculatus_F_contig1138.1106.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1138.1106.1
Unique NamemRNA_E-fasciculatus_F_contig1138.1106.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1138.1106.1 vs. uniprot
Match: D8LPM3_ECTSI (Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM3_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 9.420e-150
Identity = 229/330 (69.39%), Postives = 271/330 (82.12%), Query Frame = 3
Query:  210 ASSLKAKALSQDLRGKHFVVTGANTGLGYTTSRELAKMGAKVTLACRNAERGQAAVEKLRKEALAKPVAEGADLLEGLSDVDVRVEVLDLGALQSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVLHKRGGW------DWDNVNYTKPKTYVPLDAYGRSKLANVLDAKGFAERLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVMKSLGAFVLASPLTGSLTTLRCAVDPALAGPEFSGKYWSRMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEDLL 1181
            +++ KAK++ QDLRGKHFVVTGANTGLGY T+RELAKMGA VTLACR+AERGQ A++K++ EAL KPV EG DLLEGL+DVDVR+EVLDLG+LQSV++FAQR K+SG K+DVLINNAGIMAIP    TVDGLE QIGVNHFG HLLTRLME  + DGGRV+FLSS+ H++         D+DNVNY KP TY    AYGRSKLAN+LDAK FA+RL  R I+TYA HPG+VNT+L RN+TD  L+SRV R+   L  F+LA+PLTG+LTT+RCAVDP+LAGPEFSGKYW  MK+  PS LA DPANPPRLWE+TE +LE KLGK ++DLL
Sbjct:    6 STNCKAKSVCQDLRGKHFVVTGANTGLGYATTRELAKMGAAVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLLEGLTDVDVRLEVLDLGSLQSVIAFAQRFKASGTKVDVLINNAGIMAIPERRETVDGLEMQIGVNHFGGHLLTRLMEPLMNDGGRVIFLSSLGHRQPPGQAKVTLDFDNVNYEKPDTYNSWMAYGRSKLANILDAKEFAKRLEARGISTYACHPGIVNTELMRNMTDSSLMSRVTRLTAPLSRFILATPLTGALTTIRCAVDPSLAGPEFSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEAKLGKNVDDLL 335          
BLAST of mRNA_E-fasciculatus_F_contig1138.1106.1 vs. uniprot
Match: D8LP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP30_ECTSI)

HSP 1 Score: 430 bits (1105), Expect = 1.410e-137
Identity = 214/335 (63.88%), Postives = 261/335 (77.91%), Query Frame = 3
Query:  198 MGGKASSLKAKALSQDLRGKHFVVTGANTGLGYTTSRELAKMGAKVTLACRNAERGQAAVEKLRKEALAKPVAEGADLLEGLSDVDVRVEVLDLGALQSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVLHKRGG------WDWDNVNYTKPKTYVPLDAYGRSKLANVLDAKGFAERLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRV-MKSLGAFVLASPLTGSLTTLRCAVDPALAGPEFSGKYWSRMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEDLL 1181
             G   ++ KAK+L QDLRGKHF+VTGANTGLGY T+RELAKMGAKVTLACR+AERGQ A++K++ EAL KPV EG DLL+GL++VDVR+EVLDLG+LQSVV+FAQR K+SG K+DVL+NNAGI  +P    T DGLE QIGVNHFG HLLTRLME  + DGGRV+FLSS+ H R        WDWDNVN+ KPKTY  L AY RSKLAN+ DAK FA+RL+ R INTYA+ PG+V T++ R +  G+L+  +      +LG   L  PL G+LTT+RCAVDP+LAGPE SGKYW  MK+  PS LA DPANPPRLWE+TE +LE KLGK+++D++
Sbjct:  151 FGDSKATRKAKSLRQDLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLLDGLTEVDVRLEVLDLGSLQSVVAFAQRFKASGTKVDVLVNNAGIFGVPNRRETADGLEMQIGVNHFGGHLLTRLMEPSMNDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLMMPIVNAGYVALGWVWLKGPLDGALTTVRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEEKLGKRVDDVV 485          
BLAST of mRNA_E-fasciculatus_F_contig1138.1106.1 vs. uniprot
Match: A0A6H5JP92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP92_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 6.290e-137
Identity = 211/334 (63.17%), Postives = 255/334 (76.35%), Query Frame = 3
Query:  198 MGGKASSLKAKALSQDLRGKHFVVTGANTGLGYTTSRELAKMGAKVTLACRNAERGQAAVEKLRKEALAKPVAEGADLLEGLSDVDVRVEVLDLGALQSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVLHKRGG------WDWDNVNYTKPKTYVPLDAYGRSKLANVLDAKGFAERLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRV-MKSLGAFVLASPLTGSLTTLRCAVDPALAGPEFSGKYWSRMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEDL 1178
             G   ++ KAK+L QDLRGKHF+VTGANTGLGY T+RELAKMGAKVTLACR+AERGQ A++KL+ E L KP  EG DLL+GL++VDVR+EVLDLG+L+SV++FAQ  K+SG K+DVL+NNAGI  +P    T DGLE  IGVNHFG HLLTRLME  I DGGRV+FLSS+ H R        WDWDN+N+ KPKTY  L AY RSKLAN+ DAK FA+RL+ R INTYA+ PG+V T++ R +  G+LI  +      +LG   L  PL G+LTT+RCAVDP LAGPE SGKYW  MK+  PS LA DPANPPRLWEITE +LE KLGK+++D+
Sbjct:    4 FGDSKATRKAKSLRQDLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKLKAEVLEKPAKEGVDLLDGLTEVDVRLEVLDLGSLRSVIAFAQGFKASGTKVDVLVNNAGIFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPSINDGGRVLFLSSLTHSRPPGMPKTTWDWDNMNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYAALGWVWLKGPLDGALTTIRCAVDPCLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEDKLGKRVDDV 337          
BLAST of mRNA_E-fasciculatus_F_contig1138.1106.1 vs. uniprot
Match: D7FTL4_ECTSI (Similar to Retinol dehydrogenase 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL4_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 8.340e-127
Identity = 192/206 (93.20%), Postives = 196/206 (95.15%), Query Frame = 3
Query:  567 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVLHKRGGWDWDNVNYTKPKTYVPLDAYGRSKLANVLDAKGFAERLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVMKSLGAFVLASPLTGSLTTLRCAVDPALAGPEFSGKYWSRMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEDLLK 1184
            MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSV HK GGWDWDNVNYTKP  YVP+ AYGRSKLANVLDAK FA  LSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRV KSLGAFVLASPLTGSLTTLRCA+DPALAGPEFSGKYWS MKQV+PSALASDPANPPRLWEITEELLETKLGKKIE+LLK
Sbjct:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGGWDWDNVNYTKPNKYVPMIAYGRSKLANVLDAKAFAGHLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVAKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVQPSALASDPANPPRLWEITEELLETKLGKKIENLLK 206          
BLAST of mRNA_E-fasciculatus_F_contig1138.1106.1 vs. uniprot
Match: A0A6H5JGN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN4_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 7.230e-92
Identity = 151/176 (85.80%), Postives = 161/176 (91.48%), Query Frame = 3
Query:  420 GADLLEGLSDVDVRVEVLDLGALQSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVLHKRGGWDWDNVNYTKPKTYVPLDAYGRSKLANVLDAKGFAERLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVM 947
            G DLLEGLSDVDV+VEVLDLG LQSVVSFAQRLKSSGQKIDVLI+NAGIMAIPTE+R+VDGLEKQIGVNHF THLL+RLM KQIIDGGRVVF SSV HK GG DWDNVNYTKP  + P+ AYGRSKLANVLDAKGFA  LSDRRINTYALHPGVVNTDLFRN TDGRLISR+F+V+
Sbjct:   29 GVDLLEGLSDVDVQVEVLDLGVLQSVVSFAQRLKSSGQKIDVLIDNAGIMAIPTEKRSVDGLEKQIGVNHFVTHLLSRLMGKQIIDGGRVVFFSSVAHKHGGCDWDNVNYTKPNEHGPMIAYGRSKLANVLDAKGFAGHLSDRRINTYALHPGVVNTDLFRNATDGRLISRMFQVV 204          
BLAST of mRNA_E-fasciculatus_F_contig1138.1106.1 vs. uniprot
Match: A0A433SZU2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SZU2_ELYCH)

HSP 1 Score: 209 bits (533), Expect = 4.700e-57
Identity = 124/310 (40.00%), Postives = 180/310 (58.06%), Query Frame = 3
Query:  237 SQDLRGKHFVVTGANTGLGYTTSRELAKMGAKVTLACRNAERGQAAVEKLRKEALAKPVAEGADLLEGLSDVDVRVEVLDLGALQSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQI--IDGGRVVFLSSVLHKRGGWDWDNVNYTKPKTYVPLDAYGRSKLANVLDAKGFAERLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVMKSLGAFVLASPLTGSLTTLRCAVDPALAGPEFSGKYWSRMKQVKPSALASDPANPPRLWEITEELLETKLG 1160
            ++ L  K  ++TGANTGLG  T+R+LAK G ++ +ACRN E+G+A     RKE           ++E   + DV V+ LDL + +S+ +FA++   +  ++D+LINNAG+MA P +  T DGLE QIG NHFG  LLT L+  ++      R+V LSS+ H      WD++N    K Y    AYG+SKLAN+L     + RL    +   ++HPG VNTDL R+   G     +F+++K L      +P+ G+ TTL CA+ P L   E SGKY+   K+  PS      A+  RLWE+TEE+++ KL 
Sbjct:    8 TETLELKTVLITGANTGLGKETARDLAKRGGRIIMACRNLEKGEAT----RKE-----------IVEETKNEDVVVQELDLASFESIQNFAKKFNETETRLDILINNAGVMACP-KTLTKDGLEMQIGTNHFGHFLLTNLLLDKLKACSPSRIVILSSMAHAFASIKWDDIN--SDKKYGDWAAYGQSKLANILHCLELSNRLKGTGVTVNSVHPGGVNTDLQRHTNRG-----IFKLLKPLSKLFFKTPVDGAQTTLYCALSPDLE--EVSGKYFVDCKEKAPSRRGQSEADAKRLWELTEEIIQQKLS 292          
BLAST of mRNA_E-fasciculatus_F_contig1138.1106.1 vs. uniprot
Match: A0A6J8C7G3_MYTCO (RDH12 n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8C7G3_MYTCO)

HSP 1 Score: 201 bits (511), Expect = 4.520e-54
Identity = 127/330 (38.48%), Postives = 198/330 (60.00%), Query Frame = 3
Query:  165 TTGS*RVACPIMGGKASSLKAKALSQDLRGKHFVVTGANTGLGYTTSRELAKMGAKVTLACRNAERGQAAVEKLRKEALAKPVAEGADLLEGLSDVDVRVEVLDLGALQSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLM--EKQIIDGGRVVFLSSVLHKRGGWDWDNVNYTKPKTYVPLDAYGRSKLANVLDAKGFAERLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVMKSLGAFVLASPLTGSLTTLRCAVDPALAGPEFSGKYWSRMKQVKPSALASDPANPPRLWEITEELLE 1148
            TT    V    +   A+ ++    +  L GKH ++TGANTG+G  T+ +LA  GAKVTLACR+ +R Q A +               D+ +   + ++ V+ L+L +L+SV SFA+ +  + ++IDVLINNAGIM  P   +T DG E Q GVNH G  LLT L+  + +I    RVV +SS+ H+RG  ++D++N  + K Y    AY +SKLANVL +   A++L    + TY+LHPGV+NT+L R+VT     S  +R++ S+  +++ +P  G+ TT+ CAVD +L+  E +GKY+S   +  PS  A +  N  RLW+++ ++++
Sbjct:   19 TTAGVGVTLLCVRRYAAGVRYTNTTTRLDGKHVIITGANTGIGKETAIDLANRGAKVTLACRDMKRAQDAAD---------------DIKQITGNQNIIVKKLNLASLKSVRSFAEDINKNEKRIDVLINNAGIMRCPYW-KTDDGFEMQFGVNHLGHFLLTNLLLDKLKISAPSRVVTVSSLAHERGKMNFDDLN--QEKNYDKGSAYSQSKLANVLFSSELAKKLQGTGVTTYSLHPGVINTELSRHVTQ----SMGWRMLLSVIKYLIKTPNEGAQTTIYCAVDESLS--EETGKYYSDCAKKTPSKEALNDENAKRLWKLSAKMVD 324          
BLAST of mRNA_E-fasciculatus_F_contig1138.1106.1 vs. uniprot
Match: A0A8K0JWE7_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0JWE7_LADFU)

HSP 1 Score: 195 bits (496), Expect = 7.050e-52
Identity = 134/336 (39.88%), Postives = 196/336 (58.33%), Query Frame = 3
Query:  198 MGGKASS-----LKAKALSQDLRGKHFVVTGANTGLGYTTSRELAKMGAKVTLACRNAERGQAAVEKLRKEA-------LAKPVAEGADLLEGLSDVDVRVEVLDLGALQSVVSFAQRLKSSGQKIDVLINNAG---IMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGG--RVVFLSSVLHKRGGWDWDNVNYTKPKTYVPLDAYGRSKLANVLDAKGFAERLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVMKSLGAFVLASPLTGSLTTLRCAVDPALAGPEFSGKYWSRMKQVKPSALASDPANPPRLWEITEELLETK 1154
            MGG+ SS      ++KA    L GK  ++TG NTG+G  T+++  K G +V +ACR+ E+  AA +++ + A       +   + E   ++E      V V  LDL +L SV  FAQ++ ++  +I++LINNAG   IMA P + +T DG E Q+GVNH G  LLT L+  +I      R+V +SS+ HK G +++D++NY K   Y    AY RSKLAN+L  K  A+RL    + TYALHPGVV T+L R++ D  L+  +  + +++G  V  SP+ GS TT+ CAVD   A    +G Y+S  +   PSA A DPA   RLWE + + +E K
Sbjct:    1 MGGRLSSWWFGECRSKAR---LDGKLAIITGCNTGIGKETAKDFVKRGCRVIMACRDLEKANAAAKEVMEAAKEIDGNGMKPEIVENTPVVE---KPKVEVYHLDLTSLDSVRQFAQKILATESEINLLINNAGEEGIMACP-QGKTKDGHELQLGVNHLGHFLLTCLLINRICASREPRIVNVSSMAHKWGDFNFDDINYEKTP-YSATMAYSRSKLANILFTKELAKRLQGTGVRTYALHPGVVATELGRHL-DSTLLPGMSWIFRNVGKVVAKSPVQGSQTTIYCAVDEKTANE--TGLYYSDCRVKTPSAKAKDPALASRLWEESLKWVELK 325          
BLAST of mRNA_E-fasciculatus_F_contig1138.1106.1 vs. uniprot
Match: A0A1B6KSJ8_9HEMI (Uncharacterized protein n=5 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6KSJ8_9HEMI)

HSP 1 Score: 193 bits (490), Expect = 2.580e-51
Identity = 126/304 (41.45%), Postives = 177/304 (58.22%), Query Frame = 3
Query:  237 SQDLRGKHFVVTGANTGLGYTTSRELAKMGAKVTLACRNAERGQAAVEKLRKEALAKPVAEGADLLEGLSDVDVRVEVLDLGALQSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGG--RVVFLSSVLHKRGGWDWDNVNYTKPKTYVPLDAYGRSKLANVLDAKGFAERLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVMKSLGAFVLASPLTGSLTTLRCAVDPALAGPEFSGKYWSRMKQVKPSALASDPANPPRLWEITEEL 1142
            S  L  K  V+TG NTG+G  T+REL K+GA+V +ACR+ ++ + A + ++     +   E  DL E      V V+ LDL +L SV   A+ L  + + ID+LINNAG+M  P    T DG E Q G NH G  L T L+  +II     R++ LSSV H RG  D+D++N+ K ++Y P+ AYG+SKLANVL +K  A RL DR++ TYALHPGV+ T+L R++ D        ++  +LG F   +   G+ TTL CA+D  L     +G Y+S     +PSA+A D     RLWE +  L
Sbjct:   11 STRLDNKTVVITGCNTGIGKVTARELYKLGARVVMACRDIKKAEEAADDIKSTVANQ---EHKDLGE------VVVQKLDLSSLTSVRECAKILLETERHIDILINNAGVMMCPYAS-TEDGFEMQFGTNHLGHFLFTCLLLPRIISSAPSRIITLSSVAHARGQIDFDDLNWKK-RSYSPMAAYGQSKLANVLFSKELARRLGDRKVTTYALHPGVIRTELGRHM-DSVYFKGSRQLAATLGYFFYKTLDQGAQTTLHCALDQDLGSQ--TGLYYSDCITKEPSAVAKDEEVARRLWEESARL 300          
BLAST of mRNA_E-fasciculatus_F_contig1138.1106.1 vs. uniprot
Match: L1JAU5_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JAU5_GUITC)

HSP 1 Score: 193 bits (490), Expect = 7.700e-51
Identity = 135/356 (37.92%), Postives = 188/356 (52.81%), Query Frame = 3
Query:  195 IMGGKASSLKAKAL--------SQDLRGKHFVVTGANTGLGYTTSRELAKMGAKVTLACRNAERGQAAVEKLRKEALAKPVAEGADLLEGLSDVDVRVEVLDLGALQSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGG------RVVFLSSVLH--KRGGWDWDNVNYTKPKTYVPLDAYGRSKLANVLDAKGFAERL-SDRRINTYALHPGVVNTDLFRNV--------------TDGRLISRVF---RVMKSLGAFVLASPLTGSLTTLRCAVDPALAGPEFSGKYWSRMKQVKPSALASDPANPPRLWEITEELLETKLG 1160
            + GG A+ +  K +        + DL G+  VVTGANTGLG  T   LAK+GA+V LA R+ ERG+ A +++R          G+D L  +         LDL +L+S+  FA  L+S   KID+L+NNAG+MAIPT E T DGLE+QIG+NHFG   LT L+  QI          R++ LSS  H     G ++D++      +Y P  AYG+SKLAN+L  K    RL +D  ++  A+HPGVV T+L RN                 G+L         V+  L  +    P  G+ T +RC+VDP L G +  G+Y+    +  PS  A D +   +LWEI+EEL  +K  
Sbjct:   18 VAGGAAALVLGKKVLDGGDYTGTPDLTGQVAVVTGANTGLGKETCIRLAKLGAEVVLASRSKERGEKAEKEIR-------ALTGSDKLSTME--------LDLASLKSIELFASELRSRHDKIDLLVNNAGVMAIPTREETKDGLERQIGINHFGHFHLTNLLLPQIKKASEKSGDARIINLSSDAHLIAFNGMNFDDLQ--SKSSYDPWKAYGQSKLANILFTKELQRRLGADSPVSAAAVHPGVVRTELGRNFFLPPELCSSLGSVDCKGQLPPAALVAGAVLLPLAVYTSRDPAQGAQTQVRCSVDPELKG-KLGGRYFRDCHEAAPSPAAQDASAALKLWEISEELTGSKFN 355          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1138.1106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM3_ECTSI9.420e-15069.39Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID... [more]
D8LP30_ECTSI1.410e-13763.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP92_9PHAE6.290e-13763.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTL4_ECTSI8.340e-12793.20Similar to Retinol dehydrogenase 12 n=1 Tax=Ectoca... [more]
A0A6H5JGN4_9PHAE7.230e-9285.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A433SZU2_ELYCH4.700e-5740.00Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A6J8C7G3_MYTCO4.520e-5438.48RDH12 n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8C7G3_... [more]
A0A8K0JWE7_LADFU7.050e-5239.88Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A1B6KSJ8_9HEMI2.580e-5141.45Uncharacterized protein n=5 Tax=Cicadellinae TaxID... [more]
L1JAU5_GUITC7.700e-5137.92Uncharacterized protein n=2 Tax=Guillardia theta T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1138contigE-fasciculatus_F_contig1138:6697..11724 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score456.4
Seed ortholog evalue1.1e-125
Seed eggNOG ortholog2880.D8LPM3
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-06_008680.1
Exons4
Model size2891
Cds size990
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1138.1106.1prot_E-fasciculatus_F_contig1138.1106.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1138 8611..9959 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927647.4847262-UTR-E-fasciculatus_F_contig1138:6696..68671622927647.4847262-UTR-E-fasciculatus_F_contig1138:6696..6867Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1138 6697..6867 +
1695995633.904177-UTR-E-fasciculatus_F_contig1138:6696..68671695995633.904177-UTR-E-fasciculatus_F_contig1138:6696..6867Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1138 6697..6867 +
1622927647.4973898-UTR-E-fasciculatus_F_contig1138:8584..86101622927647.4973898-UTR-E-fasciculatus_F_contig1138:8584..8610Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1138 8585..8610 +
1695995633.9146943-UTR-E-fasciculatus_F_contig1138:8584..86101695995633.9146943-UTR-E-fasciculatus_F_contig1138:8584..8610Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1138 8585..8610 +
1622927647.5371253-UTR-E-fasciculatus_F_contig1138:9959..103701622927647.5371253-UTR-E-fasciculatus_F_contig1138:9959..10370Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1138 9960..10370 +
1695995633.9532537-UTR-E-fasciculatus_F_contig1138:9959..103701695995633.9532537-UTR-E-fasciculatus_F_contig1138:9959..10370Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1138 9960..10370 +
1622927647.5530255-UTR-E-fasciculatus_F_contig1138:10431..117241622927647.5530255-UTR-E-fasciculatus_F_contig1138:10431..11724Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1138 10432..11724 +
1695995633.9625723-UTR-E-fasciculatus_F_contig1138:10431..117241695995633.9625723-UTR-E-fasciculatus_F_contig1138:10431..11724Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1138 10432..11724 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927647.5122693-CDS-E-fasciculatus_F_contig1138:8610..88321622927647.5122693-CDS-E-fasciculatus_F_contig1138:8610..8832Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1138 8611..8832 +
1695995633.9272363-CDS-E-fasciculatus_F_contig1138:8610..88321695995633.9272363-CDS-E-fasciculatus_F_contig1138:8610..8832Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1138 8611..8832 +
1622927647.5251675-CDS-E-fasciculatus_F_contig1138:9191..99591622927647.5251675-CDS-E-fasciculatus_F_contig1138:9191..9959Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1138 9192..9959 +
1695995633.9390395-CDS-E-fasciculatus_F_contig1138:9191..99591695995633.9390395-CDS-E-fasciculatus_F_contig1138:9191..9959Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1138 9192..9959 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1138.1106.1

>prot_E-fasciculatus_F_contig1138.1106.1 ID=prot_E-fasciculatus_F_contig1138.1106.1|Name=mRNA_E-fasciculatus_F_contig1138.1106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=330bp
MGGKASSLKAKALSQDLRGKHFVVTGANTGLGYTTSRELAKMGAKVTLAC
RNAERGQAAVEKLRKEALAKPVAEGADLLEGLSDVDVRVEVLDLGALQSV
VSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLL
TRLMEKQIIDGGRVVFLSSVLHKRGGWDWDNVNYTKPKTYVPLDAYGRSK
LANVLDAKGFAERLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVM
KSLGAFVLASPLTGSLTTLRCAVDPALAGPEFSGKYWSRMKQVKPSALAS
DPANPPRLWEITEELLETKLGKKIEDLLK*
back to top

mRNA from alignment at E-fasciculatus_F_contig1138:6697..11724+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1138.1106.1 ID=mRNA_E-fasciculatus_F_contig1138.1106.1|Name=mRNA_E-fasciculatus_F_contig1138.1106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5028bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1138:6697..11724+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCGCACGACTGGACCACCCCTGACACCTGACAAAATACAGCGACAAAATC GACTTGTAGTGAGAGGCCTTTCTTGCTGGCAGCCCGCGAGTTTCCGGGGT CATTTCCCCACCTCTCCTCCCGCCCTTGCTTTCAGGGACAGAGCCCGAAC AACACTACCGGCATACTACCGGTGAGTGATGTGTGGGATACGTGGCGGCA TGCGATGACACGGCCTCTGCTGATGAACAGCCGCACAGGGTGGTGGCCAG TGGGTGTGTTTGCGGCCCACGAAAGGCTAGTCCACATCACCTCTTGGTAC ATGTCTATTATGTTTAGCGCACCACCAGCCGGCGTGTCACACAGGAGAAG CCTTCACACCCTGTATAGCCATAGGGTAGTCTCCGGCTAAAGAGTTCACC TGCACACCCACCCGTAGTTGGTCGGAACGTGAAGGTTGGAAGGTACGTAC AGCAGTCGTCACCCCAGACTCTGAGCCAGTGGAACCAACTTCATTTTAGT CACCCAAGCACCCAAGTTTGTGACTCAAGTTGATCGGCAACTCGGTGAGT CATTCGTTGACAACATTCTGACCCAGTACTACAGTACACGGTACAGCAGC AGCAGACTACAACAAACAGCAGTGGTCTGGCATGTATGTGCTTGTGGTTT GGATCGAGAAAACAGAGTGGTGCGTTGCGCGTGCTCAACAAAAGGTGTTG AAGTCTTCCCCTGTAGACTACACGTATGTGCAGTCAATCAGGATTTTGAT CCCCGGCCGGTATACGGATGCTACAATAGAGCATTTTTTTTACTGCTGTA GCGCGGTTGGTTGTGTGGGCGATTAGACTACTACTACTGGCTCCAACTGA CTCGACTGTTGTGTGCTTGGGAAAAGTATAGATATCATTTTATTGTTACA AATAGTCTAGACAACGCAAGCTCTGGTTGTCTGTTGTTTCGTCGTTCGCA ACGATGTAGACTTGTAGACTTGCATACCAAAATGCTGAGCTTATTATCGA ACGGAAAAGTGTTTTTGGGAGATTCCTTGCTTCTTTGGAAATTCGTTGAG AGGTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCGCGCGCGCGCG TTTCCTTCGCGTGTGTTCTGATTCATTTCACGTCAAGTCGGAGGGTCGAT ACTGCTGTATTGTTTGTCTGTTGTTTGTTTTTGTTTCGACCTGGGATGAA GCTGGTGCGACGTACGTGGTACAACCCTGTATGCATAGTCTACACTTCAA TTTCCCTCTTGAAACTCTTGTGTTCGTGTACAGAACGTGTACCCACGCAC AGCAAAAACACGTATTTGTTTGTTTGGAGTGTTTTTTACTCACAATACCA CACTCACTCGTTGCTTTTTTCTTCACTCCCATCAGTTGCTAAGCCTGACG TTTATGGCGCACCGACAAACAACAATTCGTTTCCTTTACCACTCATAACG TTTGGATCCGCCTTTATCCGCTGGCGGTAACCTCAACTACATACTCACCA AGATCCTGAGCTTGGCTTCTAGGCGGAAATCAAAGGAGGACCCTTGCATT GCGTTGGAACAGGCCGATATTTGGGGCCTTTTGTCCCCTCGGGGATGAAG CGAGCACATTGTTTTTGAGTGTCTACTCTACCAACCGATAAATGATCCTG CGAGCCCAAACAAGCCGGAGACCACAAAATCAAGTAGGGCAATTGGCAAG TTGCGTCCTCCTGCTGAAACGTTAAGGAACCTTTCTCCTAGCTCATTCTA GGAGTGGAGTGCTGCTCCTTCACCTTATGGTGTCGTTGTTTCCGGGCGGG TGTCCTTTCATGCCTGTCCGTGAATGTTGCCCTGCCCCCCTTCCATCACT TCCAATTAACCTCGAGTGCATGCCGCCTAATCCAACAGGCAGTTGAAGGG TTGCGTGTCCAATCATGGGCGGCAAGGCATCGTCTCTGAAGGCCAAGGCC CTTAGCCAAGATCTCCGCGGGAAGCACTTCGTGGTCACGGGTGCCAACAC CGGGCTGGGGTACACGACCTCTCGCGAGCTGGCCAAGATGGGGGCAAAGG TCACGCTCGCGTGCAGGAACGCAGAGAGAGGCCAGGCAGCGGTCGAGAAG CTACGCAAGGAGGCGCTGGCGAAGCCGGTCGCGGAGGTACGTCCGTGGCG ACCGTCTTCGTTTTCAACAGGGGGTGAAATGCTACCCAAAAAAGTCACGA GTGAGAACGTGCGACGGTGGCACGATGCCATCATTTTGCGCCACTCACAC TTAACGTGGACGTAGCTGTGTGCCCCTAGTAGGGATGTAGCTGTGTACCA CTTGAGGCTTGTTTTTCCCGTCGCCGTGGCTTTTGGTTGTGTGCTCTCAG GCAAGGTGACCCGTTACACGGTTGGTTTTGGCAGGGTTGGTGACCAAGAT TTTCCCGAGAACAACCTCGTTCGCGGGCGCAAATTGCCATAAGAACGAGA GAAAACTTTCCCCATGTTTTGGGGCGCCCATTTTTCTGTGTGCAGGGCGC TGATCTGCTTGAGGGACTCAGCGATGTCGATGTGCGAGTGGAGGTCTTGG ACTTGGGAGCGCTGCAGTCCGTGGTCTCCTTCGCGCAGAGACTGAAATCT TCGGGCCAGAAAATCGACGTTCTCATCAACAACGCCGGAATCATGGCCAT CCCCACCGAGGAGCGCACCGTAGACGGCCTCGAGAAGCAGATCGGGGTGA ATCACTTCGGCACGCACCTTCTGACCAGGCTGATGGAAAAGCAGATCATC GACGGAGGCCGCGTGGTGTTCCTGTCTTCCGTGCTGCACAAGCGTGGCGG TTGGGACTGGGACAACGTGAACTACACCAAGCCCAAGACGTACGTACCCT TGGACGCGTACGGCCGGTCCAAGCTCGCGAACGTCCTGGACGCGAAGGGG TTCGCCGAGCGCCTGAGCGATCGCAGGATCAACACGTACGCGCTTCACCC AGGGGTGGTCAACACCGACCTCTTTCGGAACGTCACCGACGGCCGTTTAA TCTCTCGCGTGTTTCGGGTGATGAAGTCTCTCGGTGCCTTTGTGCTGGCG TCCCCCCTCACGGGGTCGTTGACCACCCTGCGATGTGCGGTCGATCCCGC GCTCGCCGGTCCCGAGTTTTCGGGGAAGTATTGGTCCCGCATGAAGCAAG TCAAGCCGTCGGCGCTGGCATCGGACCCTGCCAACCCACCCCGCCTGTGG GAGATCACGGAGGAACTGCTGGAGACTAAGCTGGGAAAGAAGATCGAAGA CCTCCTGAAGTAGTTAGCTAATTTTTTTTAAGGTAGCCGAGACACAGTCA GTCAGTTGCTTCCAACAAAGTCCATGCCTTGTGTGCAGTTAGTTCGTGCC GATGTAGTAGTATTTCTCAACGGTTCACTCGGGAACTGTTCTTGAGGCGG ACACGTTGTCGGCAGTTGTGCCATAAAGCGGTAATTGTTTTGACGGTAGG GGGGTATTGCGTCCATTGGCGGTATCGCCTTTGACAGGCGCGGTGAAACC TATATATGGTGTGATTTTCCGGCGGTAATGCCATGTGGCGGTAGTTTGGG CGGTAGGCCGTGTTGCGCTTTTCGGCGGCACCGACTTTGACGGAGGGTAT ATTCTAGAAAACGGCGGTAATGGTTCGGCGGTAACGCCCTGCGGCTGTGA TTTGATGGCGGTGACTACCGTAACGTCCTTTGGGAACGCCCCCCTCAATG GCTTAGCCCCCCCTCCCCCCCCCCAATACCGCCAGGGTTACTTTTTTTTT TCGCCCTTATGCCTTTCTTTGAGTTACAATAGCCGCGGGGTGTTCGTTTT TCGGCAAACTATTGGGGCGCCCCACGGGGCGTCCAACACAAACCCATGGA CGATATTCCAGGCAGCATTCTCGTGTGTGCGCCAGTTTCCGTATTTGTTG TAGTTGGTTGGGTGTCGGTGTCCGTGTCGCTTTTGTGCTGTACATCAGGT GCATCACGGTAGAAAGAGACCACGCCCCCAGTGGACTTTTCGCGCCGTTT TTTTTTCTTCTAATAATCGCCCCCTCTAATTGTGAGGTAAACCCGCGGTG TTCGTTTTCAACAAAGTCAAAAGGATTCACCCGGGGTGCGTCCTCAAAGG ACGTTATGATATTGTGGTAAGCTGGGAAGAAAGGAGATCGAAGACCTCCT GAAAAGTAGTCAGCTAGTTCGTGAAGGTGGTCGAGTTGCACCCAACCAAC AAGTCCGTTGTTTTGCAACAACAACGTTCATGTCTTGCGGCAAACCGTGT ATGTATGTTAAGTTCCAAGGGTTTACAAGCGGGCACGTTTTCGGCGGTAA TGCAATAACAAGTAAGGCGGTGTTTTTTCGGCGGTAGGCGGTATTGCGTT TGCTGGCGGTATCGACCCTGGAGGAGGCGGAAAAACTTCCATACATACAT GTATATGGTGCTTTTTCGGCGGTACTGCTGCAACGCCATACGGCAGTAAA TTCTTGGCGGCTGTAGGCTGTTATTTTCGTTTTTCGGCGGTAACGAAATT GGGGAAGGAGGTGGTGAAACAACTAACCGGCGGCAATCGCCGGTACACCG GTACCGCCCAACAGGAGGGCCGTATTTTCCCGGCGGCAAATTACCGAGTA AACCGTTCATTGGAGCATTTGTAGCATAAGCTAAGGATAGAGAAGAGCGG CCAGACCGACACCAACTAGTCGTTTATTTCCGTTATGGTACTACTCAAGC GTAGCTCAAGAAAGACAGGCAACTCGTAGCAAATAGGTCAAAAAGACCCT TCAGCGTACGAATCAGGCTAAAAAATCCCTCTTGTGCCTGTAGACTAAGT AATTTGGAATAGGAGGTTGGGGGAATGTCGTTTTTTTACAAAAAAGGAAC AAGATCCCTCTCGTGTCTTGCATTCGCCCTGGGTGTTTGTTTTTCATTAG ATCTCTATCGTTGTGCCCTAGTCCAACATTCGCGATTTTCTTTATAACGG TAAAGCACGAAGGAGAGCACAACCTGGTATCACCTCCGTAATAGGGACAG TATGAGGATGGGCTGTGGAGCAGCGTGG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1138:6697..11724+

>mRNA_E-fasciculatus_F_contig1138.1106.1 ID=mRNA_E-fasciculatus_F_contig1138.1106.1|Name=mRNA_E-fasciculatus_F_contig1138.1106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1980bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1138:6697..11724+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGCGGCAAGGCATCGTCTCTGAAGGCCAAGGCCCTTAGCCAAGATCT
CCGCGGGAAGCACTTCGTGGTCACGGGTGCCAACACCGGGCTGGGGTACA
CGACCTCTCGCGAGCTGGCCAAGATGGGGGCAAAGGTCACGCTCGCGTGC
AGGAACGCAGAGAGAGGCCAGGCAGCGGTCGAGAAGCTACGCAAGGAGGC
GCTGGCGAAGCCGGTCGCGGAGATGGGCGGCAAGGCATCGTCTCTGAAGG
CCAAGGCCCTTAGCCAAGATCTCCGCGGGAAGCACTTCGTGGTCACGGGT
GCCAACACCGGGCTGGGGTACACGACCTCTCGCGAGCTGGCCAAGATGGG
GGCAAAGGTCACGCTCGCGTGCAGGAACGCAGAGAGAGGCCAGGCAGCGG
TCGAGAAGCTACGCAAGGAGGCGCTGGCGAAGCCGGTCGCGGAGGGCGCT
GATCTGCTTGAGGGACTCAGCGATGTCGATGTGCGAGTGGAGGTCTTGGA
CTTGGGAGCGCTGCAGTCCGTGGTCTCCTTCGCGCAGAGACTGAAATCTT
CGGGCCAGAAAATCGACGTTCTCATCAACAACGCCGGAATCATGGCCATC
CCCACCGAGGAGCGCACCGTAGACGGCCTCGAGAAGCAGATCGGGGTGAA
TCACTTCGGCACGCACCTTCTGACCAGGCTGATGGAAAAGCAGATCATCG
ACGGAGGCCGCGTGGTGTTCCTGTCTTCCGTGCTGCACAAGCGTGGCGGT
TGGGACTGGGACAACGTGAACTACACCAAGCCCAAGACGTACGTACCCTT
GGACGCGTACGGCCGGTCCAAGCTCGCGAACGTCCTGGACGCGAAGGGGT
TCGCCGAGCGCCTGAGCGATCGCAGGATCAACACGTACGCGCTTCACCCA
GGGGTGGTCAACACCGACCTCTTTCGGAACGTCACCGACGGCCGTTTAAT
CTCTCGCGTGTTTCGGGTGATGAAGTCTCTCGGTGCCTTTGTGCTGGCGT
CCCCCCTCACGGGGTCGTTGACCACCCTGCGATGTGCGGTCGATCCCGCG
CTCGCCGGTCCCGAGTTTTCGGGGAAGTATTGGTCCCGCATGAAGCAAGT
CAAGCCGTCGGCGCTGGCATCGGACCCTGCCAACCCACCCCGCCTGTGGG
AGATCACGGAGGAACTGCTGGAGACTAAGCTGGGAAAGAAGATCGAAGAC
CTCCTGAAGTAGGGCGCTGATCTGCTTGAGGGACTCAGCGATGTCGATGT
GCGAGTGGAGGTCTTGGACTTGGGAGCGCTGCAGTCCGTGGTCTCCTTCG
CGCAGAGACTGAAATCTTCGGGCCAGAAAATCGACGTTCTCATCAACAAC
GCCGGAATCATGGCCATCCCCACCGAGGAGCGCACCGTAGACGGCCTCGA
GAAGCAGATCGGGGTGAATCACTTCGGCACGCACCTTCTGACCAGGCTGA
TGGAAAAGCAGATCATCGACGGAGGCCGCGTGGTGTTCCTGTCTTCCGTG
CTGCACAAGCGTGGCGGTTGGGACTGGGACAACGTGAACTACACCAAGCC
CAAGACGTACGTACCCTTGGACGCGTACGGCCGGTCCAAGCTCGCGAACG
TCCTGGACGCGAAGGGGTTCGCCGAGCGCCTGAGCGATCGCAGGATCAAC
ACGTACGCGCTTCACCCAGGGGTGGTCAACACCGACCTCTTTCGGAACGT
CACCGACGGCCGTTTAATCTCTCGCGTGTTTCGGGTGATGAAGTCTCTCG
GTGCCTTTGTGCTGGCGTCCCCCCTCACGGGGTCGTTGACCACCCTGCGA
TGTGCGGTCGATCCCGCGCTCGCCGGTCCCGAGTTTTCGGGGAAGTATTG
GTCCCGCATGAAGCAAGTCAAGCCGTCGGCGCTGGCATCGGACCCTGCCA
ACCCACCCCGCCTGTGGGAGATCACGGAGGAACTGCTGGAGACTAAGCTG
GGAAAGAAGATCGAAGACCTCCTGAAGTAG
back to top