prot_E-fasciculatus_F_contig11379.1103.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11379.1103.1
Unique Nameprot_E-fasciculatus_F_contig11379.1103.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length71
Homology
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: D7FWT4_ECTSI (Polynucleotide adenylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT4_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 2.460e-38
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
Query:    1 MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKVT 69
            MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKVT
Sbjct:  315 MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKVT 383          
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A6H5JKW8_9PHAE (Polynucleotide adenylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW8_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 3.670e-36
Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0
Query:    1 MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKV 68
            MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSE+EHRAWVGWVESRLRK+
Sbjct:  340 MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEEEHRAWVGWVESRLRKL 407          
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A836C8Y5_9STRA (Poly(A) polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Y5_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.380e-14
Identity = 33/69 (47.83%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKVT 69
            +  E +RGLE+   I +E+   S +++LFEPSDFF R+ HY+ VD++A + ++HR W GW+ESRLR +T
Sbjct:  341 LKEEIARGLELTEKIQEER---SHWAELFEPSDFFYRFQHYVQVDVLADNPEDHRRWFGWIESRLRHLT 406          
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A482RRI6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RRI6_9ARCH)

HSP 1 Score: 71.2 bits (173), Expect = 8.260e-13
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    1 MTSEFSRGLEVVNGIMKEKGSLS-AFSKLFEPSDFFLRYNHYLAVDMMASSED-EHRAWVGWVESRLRKVT 69
            M  EF RG  VV  I ++K  +  A+ +LF PSDFFLRY HYLA  ++ S E+ E R+WVG+VESR+R++T
Sbjct:  338 MVDEFRRGYSVVEKIFRQKTLVKEAWEELFAPSDFFLRYPHYLACHIVGSGENAESRSWVGFVESRIRRLT 408          
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: UPI000EF6DF92 (poly(A) polymerase gamma n=1 Tax=Athene cunicularia TaxID=194338 RepID=UPI000EF6DF92)

HSP 1 Score: 70.5 bits (171), Expect = 1.580e-12
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    1 MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLR 66
            M  EF  GLEV N I++ K   S +SKLFEP +FF +YNHY+ +   AS+E++H  WVG VES++R
Sbjct:  335 MVEEFKHGLEVTNEILRGK---SDWSKLFEPLNFFQKYNHYIVLMASASTEEQHLEWVGLVESKIR 397          
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A485KNG9_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNG9_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.020e-12
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 0
Query:    1 MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRK 67
            M  EFSRGLE+V  I+ + G+   +S+LFEPS++F+ + HYLAV+M  S   +  AW G+ ESRLRK
Sbjct:  330 MKEEFSRGLEMVKAIINDGGA--DWSRLFEPSEYFVDHQHYLAVEMYVSDPADEGAWCGFAESRLRK 394          
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A2D4BYW1_PYTIN (Poly(A) polymerase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYW1_PYTIN)

HSP 1 Score: 68.9 bits (167), Expect = 5.490e-12
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0
Query:    1 MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKV 68
            M  EF RGLE+V  I+ + G    +  LFEPSDFF    HYLAVD+  + E+E +AW G+ ESR+RK+
Sbjct:  291 MKEEFKRGLEIVQDILNKGGD--NWDALFEPSDFFGVQQHYLAVDVFTTKEEEEQAWCGFCESRVRKL 356          
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A8K1CSA9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSA9_PYTOL)

HSP 1 Score: 68.9 bits (167), Expect = 5.500e-12
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0
Query:    1 MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKV 68
            M  EF RGL++V  I+ + G    +  LFEPSDFF    HYLAVD+  + EDE +AW G+ ESR+RK+
Sbjct:  330 MKDEFKRGLDLVQDILGKGGD--DWDALFEPSDFFAVQQHYLAVDVYTTKEDEEQAWCGFCESRIRKL 395          
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A2P6N4S9_9EUKA (Poly(A) polymerase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N4S9_9EUKA)

HSP 1 Score: 65.5 bits (158), Expect = 9.140e-11
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    1 MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLR 66
            +  EF RG  V   I  +KG+ + +  LFEPSDFF RY  Y+ + +MA+SE+EHR W GWVESRLR
Sbjct:  328 LKKEFVRGSLVTGEI--DKGN-AKWDALFEPSDFFHRYKVYVKLMIMANSEEEHRKWEGWVESRLR 390          
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: UPI0005214EC5 (poly(A) polymerase gamma n=1 Tax=Apaloderma vittatum TaxID=57397 RepID=UPI0005214EC5)

HSP 1 Score: 65.5 bits (158), Expect = 9.180e-11
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    1 MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLR 66
            M  E  RGL V N I++ K   S +SKLFEPS+FF +Y HY+ +   AS+++ H  WVG VES++R
Sbjct:  329 MVEEIKRGLAVTNEILEGK---SDWSKLFEPSNFFQKYKHYIVLTASASTKEHHIEWVGLVESKIR 391          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWT4_ECTSI2.460e-38100.00Polynucleotide adenylyltransferase n=1 Tax=Ectocar... [more]
A0A6H5JKW8_9PHAE3.670e-3697.06Polynucleotide adenylyltransferase n=1 Tax=Ectocar... [more]
A0A836C8Y5_9STRA1.380e-1447.83Poly(A) polymerase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A482RRI6_9ARCH8.260e-1352.11Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
UPI000EF6DF921.580e-1251.52poly(A) polymerase gamma n=1 Tax=Athene cuniculari... [more]
A0A485KNG9_9STRA4.020e-1250.75Poly(A) polymerase n=1 Tax=Aphanomyces stellatus T... [more]
A0A2D4BYW1_PYTIN5.490e-1250.00Poly(A) polymerase n=2 Tax=Pythium insidiosum TaxI... [more]
A0A8K1CSA9_PYTOL5.500e-1250.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P6N4S9_9EUKA9.140e-1153.03Poly(A) polymerase n=1 Tax=Planoprotostelium fungi... [more]
UPI0005214EC59.180e-1148.48poly(A) polymerase gamma n=1 Tax=Apaloderma vittat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007010Poly(A) polymerase, RNA-binding domainPFAMPF04926PAP_RNA-bindcoord: 33..69
e-value: 3.5E-10
score: 39.8
NoneNo IPR availableGENE3D3.30.70.590coord: 33..71
e-value: 6.1E-11
score: 44.3
NoneNo IPR availablePANTHERPTHR10682POLY A POLYMERASEcoord: 1..69
IPR011068Nucleotidyltransferase, class I-like, C-terminalSUPERFAMILY55003PAP/Archaeal CCA-adding enzyme, C-terminal domaincoord: 33..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11379contigE-fasciculatus_F_contig11379:542..2181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11379.1103.1mRNA_E-fasciculatus_F_contig11379.1103.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11379 542..4191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11379.1103.1 ID=prot_E-fasciculatus_F_contig11379.1103.1|Name=mRNA_E-fasciculatus_F_contig11379.1103.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=71bp
MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASS
EDEHRAWVGWVESRLRKVTKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011068NuclTrfase_I-like_C
IPR007010PolA_pol_RNA-bd_dom