mRNA_E-fasciculatus_F_contig11379.1103.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11379.1103.1
Unique NamemRNA_E-fasciculatus_F_contig11379.1103.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: D7FWT4_ECTSI (Polynucleotide adenylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT4_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 3.560e-134
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 1 
Query:    1 QVPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSWHCMPIITPAYPVMNSSANVSR*FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKVT 573
            QVPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSWHCMPIITPAYPVMNSSANVSR FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKVT
Sbjct:  194 QVPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSWHCMPIITPAYPVMNSSANVSR-FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKVT 383
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BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A6H5JKW8_9PHAE (Polynucleotide adenylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW8_9PHAE)

HSP 1 Score: 387 bits (994), Expect = 4.330e-129
Identity = 185/189 (97.88%), Postives = 188/189 (99.47%), Query Frame = 1 
Query:    4 VPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSWHCMPIITPAYPVMNSSANVSR*FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKV 570
            VPNYDSFLPVVRCVR+WAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSWHCMPIITPAYPVMNSSANVSR FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSE+EHRAWVGWVESRLRK+
Sbjct:  220 VPNYDSFLPVVRCVRKWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSWHCMPIITPAYPVMNSSANVSR-FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEEEHRAWVGWVESRLRKL 407
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A835ZG61_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG61_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.490e-71
Identity = 112/189 (59.26%), Postives = 137/189 (72.49%), Query Frame = 1 
Query:    4 VPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSWHCMPIITPAYPVMNSSANVSR*FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKV 570
            VPNY SFLPVVR VR WAK RG+Y NKMGYLGGVNFNI+VAFACQ+YP A PS LL  FFK+M  W WPN I L +P+DA LGL+VW A  N WH MPIITPAYP MNSS  VS   +L+VM  EF RG  +   ++      +++ +L  PS+FF  Y+HYLA+D+MA  E+E R W G++ESR+RK+
Sbjct:  203 VPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQAAQNPWHVMPIITPAYPAMNSSLAVSA-HSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKL 390
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BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A8K1CSA9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSA9_PYTOL)

HSP 1 Score: 223 bits (569), Expect = 3.460e-66
Identity = 113/190 (59.47%), Postives = 139/190 (73.16%), Query Frame = 1 
Query:    7 PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARA--NSWHCMPIITPAYPVMNSSANVSR*FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKV 570
            PN +SF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP AIQL + YDA+LGLEVWNA +  N +H MPI+TPAYP MNSS NVS   +L VM  EF RGL++V  I+ + G    +  LFEPSDFF    HYLAVD+  + EDE +AW G+ ESR+RK+
Sbjct:  209 PNRESFIGVLRVVRRWAKRRGLYSNKMGYLGGVNWCILVCFVNQLYPTAAPSTLLLRFFMVLSTWKWPLAIQLCKTYDAKLGLEVWNANSGNNRYHVMPILTPAYPSMNSSFNVST-HSLSVMKDEFKRGLDLVQDILGKGGD--DWDALFEPSDFFAVQQHYLAVDVYTTKEDEEQAWCGFCESRIRKL 395
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BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A1V9ZUP3_9STRA (Poly(A) polymerase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUP3_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.710e-65
Identity = 112/190 (58.95%), Postives = 139/190 (73.16%), Query Frame = 1 
Query:    7 PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARA--NSWHCMPIITPAYPVMNSSANVSR*FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKV 570
            PN  SF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F  Q+YP A PSTLL RFF ++  W WP AIQL + +DA+LGLEVWNA    N +  MPI+TPAYP MNSS NVS   +L+VM  EF RGLEVV  I+K+ GS   +S LFEP+ +F+ + HYLAV++  S+ D+  AW G+ ESRLRK+
Sbjct:  207 PNRASFIAVLRIVRRWAKKRGLYSNKMGYLGGVNYCILVCFINQLYPTAAPSTLLLRFFMILTNWKWPLAIQLCKTHDAKLGLEVWNANVGGNKYQVMPILTPAYPSMNSSYNVSV-HSLNVMKEEFKRGLEVVKTIIKDGGS--DWSALFEPTPYFVDHQHYLAVEIFTSNPDDSAAWCGYAESRLRKL 393
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A2D4BYW1_PYTIN (Poly(A) polymerase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYW1_PYTIN)

HSP 1 Score: 220 bits (560), Expect = 4.210e-65
Identity = 112/190 (58.95%), Postives = 137/190 (72.11%), Query Frame = 1 
Query:    7 PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARA--NSWHCMPIITPAYPVMNSSANVSR*FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKV 570
            PN DSF+ V+R VRRWAK RG+YSNKMGYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP AIQL + YDA+LGLEVWNA    N +  MPI+TPAYP MNSS NVS   +L VM  EF RGLE+V  I+ + G    +  LFEPSDFF    HYLAVD+  + E+E +AW G+ ESR+RK+
Sbjct:  170 PNRDSFISVLRIVRRWAKRRGIYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSNWKWPLAIQLCKTYDAKLGLEVWNANYGNNRYQTMPILTPAYPSMNSSFNVST-HSLAVMKEEFKRGLEIVQDILNKGGD--NWDALFEPSDFFGVQQHYLAVDVFTTKEEEEQAWCGFCESRVRKL 356
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: K3WQA8_GLOUD (Polynucleotide adenylyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQA8_GLOUD)

HSP 1 Score: 221 bits (562), Expect = 7.540e-65
Identity = 114/190 (60.00%), Postives = 139/190 (73.16%), Query Frame = 1 
Query:    7 PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARA--NSWHCMPIITPAYPVMNSSANVSR*FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKV 570
            PN DSF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F  Q+YP A PSTLL RFF ++A W WP AIQL + +DA+LGLEVWNA +  N +  MPI+TPAYP MNSS NVS   TL VM  EF R L++V  I+  KG +  ++ LFEPSDFF  + HYLAVD+    EDE +AW G+ ESR+RK+
Sbjct:  209 PNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLANWKWPLAIQLCKTHDAKLGLEVWNANSGNNRYQTMPILTPAYPSMNSSFNVST-HTLAVMKEEFKRALDLVQDILN-KGGVD-WAPLFEPSDFFAVHQHYLAVDVYTEVEDEEQAWCGFCESRIRKL 395
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BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A485KNG9_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNG9_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.200e-64
Identity = 110/189 (58.20%), Postives = 140/189 (74.07%), Query Frame = 1 
Query:    7 PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARA--NSWHCMPIITPAYPVMNSSANVSR*FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRK 567
            PN  SF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP+AIQL + YDA+LGLE+WNA    N +  MPI+TPAYP MNSS NVS   +L+VM  EFSRGLE+V  I+ + G+   +S+LFEPS++F+ + HYLAV+M  S   +  AW G+ ESRLRK
Sbjct:  209 PNRSSFIAVLRIVRRWAKKRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEIWNASVGGNRYQVMPILTPAYPSMNSSYNVSV-HSLNVMKEEFSRGLEMVKAIINDGGA--DWSRLFEPSEYFVDHQHYLAVEMYVSDPADEGAWCGFAESRLRK 394
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BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A3M6VV75_9STRA (Polynucleotide adenylyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VV75_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.500e-64
Identity = 111/190 (58.42%), Postives = 138/190 (72.63%), Query Frame = 1 
Query:    7 PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARA--NSWHCMPIITPAYPVMNSSANVSR*FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRKV 570
            PN +SF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F  Q+YP A PSTLL RFF ++  W WP AIQL + +DA+LGLEVWNA A  N +  MPI+TPAYP MNSS NVS   +L VM  EF RGL++V  ++ + GS   +  LFEPSDFF  + HYLAV++    E+E +AW G+ ESRLRK+
Sbjct:  209 PNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAGHNRYQVMPILTPAYPSMNSSFNVST-HSLMVMKEEFKRGLKIVQDVLSKGGS--EWGPLFEPSDFFAVHQHYLAVEVYTEKEEEEQAWCGFCESRLRKL 395
[Close]
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Match: A0A6G0WNJ7_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNJ7_9STRA)

HSP 1 Score: 217 bits (553), Expect = 4.230e-64
Identity = 109/189 (57.67%), Postives = 141/189 (74.60%), Query Frame = 1 
Query:    7 PNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNAR--ANSWHCMPIITPAYPVMNSSANVSR*FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEDEHRAWVGWVESRLRK 567
            PN +SF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP+AIQL + YDA+LGLEVWNA   AN +  MPI+TPAYP MNSS NVS   +L+VM  EF+RGL+VV  I+   G+   +S LFEPS++F+ + HYLAV++     ++ +AW G+ ESRLRK
Sbjct:  209 PNRESFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEVWNANFGANRFQVMPILTPAYPSMNSSYNVSI-HSLNVMKEEFTRGLDVVKSIINNGGA--DWSPLFEPSEYFVDHQHYLAVEIYTIDPNDQQAWCGYAESRLRK 394
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11379.1103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWT4_ECTSI3.560e-13499.48Polynucleotide adenylyltransferase n=1 Tax=Ectocar... [more]
A0A6H5JKW8_9PHAE4.330e-12997.88Polynucleotide adenylyltransferase n=1 Tax=Ectocar... [more]
A0A835ZG61_9STRA2.490e-7159.26Polynucleotide adenylyltransferase n=1 Tax=Tribone... [more]
A0A8K1CSA9_PYTOL3.460e-6659.47Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9ZUP3_9STRA2.710e-6558.95Poly(A) polymerase n=1 Tax=Achlya hypogyna TaxID=1... [more]
A0A2D4BYW1_PYTIN4.210e-6558.95Poly(A) polymerase n=2 Tax=Pythium insidiosum TaxI... [more]
K3WQA8_GLOUD7.540e-6560.00Polynucleotide adenylyltransferase n=1 Tax=Globisp... [more]
A0A485KNG9_9STRA1.200e-6458.20Poly(A) polymerase n=1 Tax=Aphanomyces stellatus T... [more]
A0A3M6VV75_9STRA2.500e-6458.42Polynucleotide adenylyltransferase n=2 Tax=Peronos... [more]
A0A6G0WNJ7_9STRA4.230e-6457.67Poly(A) polymerase n=1 Tax=Aphanomyces euteiches T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11379contigE-fasciculatus_F_contig11379:542..4191 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score142.5
Seed ortholog evalue7.5e-32
Seed eggNOG ortholog2880.D7FWT4
KEGG koko:K09254,ko:K14376
KEGG Pathwayko03015,ko04014,ko04624,ko05202,ko05203,map03015,map04014,map04624,map05202,map05203
GOsGO:0000003,GO:0002682,GO:0002683,GO:0003006,GO:0003674,GO:0003824,GO:0004652,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005847,GO:0005849,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008285,GO:0009653,GO:0009791,GO:0009908,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0022414,GO:0031123,GO:0031124,GO:0031347,GO:0031348,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0042127,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045824,GO:0046483,GO:0048366,GO:0048367,GO:0048437,GO:0048438,GO:0048441,GO:0048444,GO:0048446,GO:0048449,GO:0048451,GO:0048465,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048608,GO:0048646,GO:0048731,GO:0048827,GO:0048856,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0061458,GO:0065007,GO:0070013,GO:0070566,GO:0071704,GO:0080134,GO:0090304,GO:0090567,GO:0090696,GO:0090697,GO:0090698,GO:0099402,GO:1901360,GO:1905392,GO:1905393
EggNOG free text desc.interspecies interaction between organisms
EggNOG OGsCOG5186@1,KOG2245@2759
EC2.7.7.19
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03019
Hectar predicted targeting categoryother localisation
Exons6
Model size579
Cds size213
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927647.2063355-CDS-E-fasciculatus_F_contig11379:541..6441622927647.2063355-CDS-E-fasciculatus_F_contig11379:541..644Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11379 542..644 -
1695995633.7088172-CDS-E-fasciculatus_F_contig11379:541..6441695995633.7088172-CDS-E-fasciculatus_F_contig11379:541..644Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11379 542..644 -
1622927647.2187338-CDS-E-fasciculatus_F_contig11379:1579..16591622927647.2187338-CDS-E-fasciculatus_F_contig11379:1579..1659Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11379 1580..1659 -
1695995633.7210763-CDS-E-fasciculatus_F_contig11379:1579..16591695995633.7210763-CDS-E-fasciculatus_F_contig11379:1579..1659Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11379 1580..1659 -
1622927647.2282674-CDS-E-fasciculatus_F_contig11379:2151..21811622927647.2282674-CDS-E-fasciculatus_F_contig11379:2151..2181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11379 2152..2181 -
1695995633.7311158-CDS-E-fasciculatus_F_contig11379:2151..21811695995633.7311158-CDS-E-fasciculatus_F_contig11379:2151..2181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11379 2152..2181 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927647.2425702-UTR-E-fasciculatus_F_contig11379:2181..21971622927647.2425702-UTR-E-fasciculatus_F_contig11379:2181..2197Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11379 2182..2197 -
1695995633.748154-UTR-E-fasciculatus_F_contig11379:2181..21971695995633.748154-UTR-E-fasciculatus_F_contig11379:2181..2197Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11379 2182..2197 -
1622927647.2531257-UTR-E-fasciculatus_F_contig11379:2533..26251622927647.2531257-UTR-E-fasciculatus_F_contig11379:2533..2625Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11379 2534..2625 -
1695995633.7602122-UTR-E-fasciculatus_F_contig11379:2533..26251695995633.7602122-UTR-E-fasciculatus_F_contig11379:2533..2625Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11379 2534..2625 -
1622927647.265804-UTR-E-fasciculatus_F_contig11379:3309..34291622927647.265804-UTR-E-fasciculatus_F_contig11379:3309..3429Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11379 3310..3429 -
1695995633.7703066-UTR-E-fasciculatus_F_contig11379:3309..34291695995633.7703066-UTR-E-fasciculatus_F_contig11379:3309..3429Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11379 3310..3429 -
1622927647.2788868-UTR-E-fasciculatus_F_contig11379:4053..41911622927647.2788868-UTR-E-fasciculatus_F_contig11379:4053..4191Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11379 4054..4191 -
1695995633.7800272-UTR-E-fasciculatus_F_contig11379:4053..41911695995633.7800272-UTR-E-fasciculatus_F_contig11379:4053..4191Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11379 4054..4191 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11379.1103.1prot_E-fasciculatus_F_contig11379.1103.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11379 542..2181 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11379.1103.1

>prot_E-fasciculatus_F_contig11379.1103.1 ID=prot_E-fasciculatus_F_contig11379.1103.1|Name=mRNA_E-fasciculatus_F_contig11379.1103.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=71bp
MTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASS
EDEHRAWVGWVESRLRKVTKQ
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mRNA from alignment at E-fasciculatus_F_contig11379:542..4191-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11379.1103.1 ID=mRNA_E-fasciculatus_F_contig11379.1103.1|Name=mRNA_E-fasciculatus_F_contig11379.1103.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3650bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11379:542..4191- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGGTTCCGAACTACGATTCTTTTCTCCCGGTGGTGCGGTGCGTCCGGAG
GTGGGCCAAATCCAGGGGTTTGTATAGCAACAAGATGGGATACTTGGGAG
GGGTGAACTTCAACATCATGGTGGCCTTCGCTTGCCAGGTGGGCGGTGAA
TCAACACTGAGGCAGTGGCGGTTGCGTGTGAGCGATGATACCATGCAGTT
GGGGGGGGGTTGTTGAGTGCCGGCATATTCGTACCCAGAGAACTGATCGG
CACATCAGCACTAAGCAGGGGCCCCCCTGCTGTATTGACGAACAAGCTCG
TTTTGTATGCTGTGGTAGTCTCTACTTTCTTCCTTCGCATGTTTCGTTTG
ATTGTTGGTGAGAAGGAGGGCGTCGTGAGGGCCTGCAGATGCGGTTGTGT
TTGGCATGTCGTTTCTCCGATCACATCCATCTCCGAACCTCGGATCACAT
CTCCGATCATATTATATCTCCGATCACATCTCCGATCACACGTCGGATCA
CATCTCTGATCATATCTCCGGATCACATGTCGGATCACACCTCCGATCAC
ATATCCCACCACATCTCCAATCACATCTCCGATCACACCTCCGGCTCTAG
ACGCCACGGTGATGTTAGATCGCCTACCGTACGACACGGCATACCCAACG
AACGATCTAATAAGGCATCTTCGCAGCACCCCTTGTAGTCCGAGCATGAA
CATGAATAGGAGCTCTCCGCGTGCCTCCGAACCGACGTCGTCGCTGTCGT
TGTCGTTGCCAGATGTACCCGAACGCCGGGCCGTCGACCCTTCTGCATCG
GTTCTTCAAGCTCATGGCCGGTTGGAACTGGCCCAACGCCATCCAGCTCG
TGCAGCCTTACGACGCTGAACTTGGACTGGAGGTGACGACGCAGAGTGGA
ATAAAGTTGCAAAATACTCGATGCTTATTGGTTTGGACTGGAGGTGTCGC
AGACAGAATATTATTATTGTGACTGATTGATTCTTGCTGTTTTGAACTGG
AGGTGAGGCGGAGGTGAGTAGAGCTGCAACTGCTTGGTTCTTGTTGGTTT
GAACTGGAGGTGACGACGCAGAGTGGAATCAAGTTATAGAGATACTCGAT
GCTTACCGGTTTCGACTAGAGGTTCTTTATTCTTGTGGTTTTGATTGCAG
GTGACGTAGAAAGAAAAAGAGGTGCAGTGTTGATGCTTTTGTTTTGGTGT
GAGGACGTTGGACCCATTTAACCGTTGCAAATGCTCGATACTTGGCGAGA
GGACGTTGGACCCATTTAATGCCAGCTATTTTACGAGCATCTCGATAGCC
GGGAGAAAAGGTGGCGGAAAAGGGGAATCTGTGTGTTGGTTCATTTTTTT
GTCGTTCGTCCCCCCTCTCCCCTTCATGTAGGATAGATCGGATAGGGAAA
ATATTTTTGCATGCATAGTAGGAAGGAACGATTGGCCATCGGCGATCGGT
CTTGTGAGAACAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATCGTCTT
ACAACCTAAGGCATGAAAAACATCAAAACATGAGCACGCCCCCTCTCATT
GTTCCCCCCTGCACAGGTGTGGAACGCCCGAGCGAACAGCTGGCACTGCA
TGCCCATCATCACCCCCGCCTACCCGGTGATGAACTCCTCGGCAAACGTG
TCCAGGTAGTGAGTGATTCGGCAGTAAATAGCACCGATCCCGAATGAATT
TGCTACCGCGTGCGATTTGCAGGAACCCCAACCAAAATGTTCGGATCTAG
GCTTGAATTTTTTCCAGTGAAGTCGCCAAAGCCCCTTGCCAGGAGATTTC
GACTGCGCTACAGGACGCGGGGACCCCGCCCTACCCCGGATGGTACTTGG
AGAAACTCTACAGTATTGCGGGGGACCCGGGTTCGGTGCTAGTATGTACG
TCGAGCGGTGTACCAGTAGCTGTGTTGTTATATTTTCAGAATCCAGAATC
CAGACACTTATTTCGCCTCATCATTCCGTCTGTTTCCCCTCCAGGTTCAC
GCTTGATGTCATGACCTCGGAGTTCTCCAGGGGTCTCGAGGTGAGATGTC
ATTTCTATTTCTATTTGGAGGGGGCGGGGAGGAGGGGTGCGCGTGTCCTT
TGCCCTATCGAGCTCCCTTTTTCCTAGACGAAAAAAACTTGAATCAGGTA
CCGACCAACTTGTGGATAAAAGACAGATCTATATCGGAAGCGTAGTGTAC
ATGGGAAGAACCGGCCCTTGGAATCTTTCCGAGCACCATGGGGAATCAAG
AAAACACTCATGGGTATATTACGTGCACGTACATCTTGTGCATCTTCCAC
GTGCCAATTTCATCGGCACGATTTGGCAGGCCGCTTGTGGTACCGCCCTG
CCCACGCTAATTTCTGGACCTGCCCTCCTTGCCCAAATATCAACGGAGAA
ACACGTATAATACAATACCTGAGATTCCTCGGTAACTTTTGAGTTACGCC
CCCCCTGGCTGTGCGGCCGCGTGGAGTCAAATGTCGTTTTGCTATCTGCG
GTTGTCCATGTTTCCTTCCAACACCTTGGCAGGTTGTAAACGGCATCATG
AAAGAGAAGGGCTCTCTCTCGGCGTTCTCGAAGCTTTTTGAGCCCTCGGA
TTTCTTCCTCAGGTTTGTTCCGTGTACTGTACGTGTACCGTGTATCCAAC
ATGCAGTTCCGTGTACCGTGAACTGCTGGTTACCAAACACCACGGAAACG
GTTTCTTGTGTTCCTCATGCCATTCCGTGTTCCGTGAACCGTTTAGACAC
CCATGAACCGCCGTGCGCCATGGATTTTTTCGGAGAAGGTGTGAACATTG
AGGCCCTAGTTTTCCTGATCTCTACCAGGTATCTAGTACCTGCGTCGCAT
TCCGCACCCCCGAGACAAAAAAAGCGAGTTTGGTGTTGTGCGAACGAAGA
GGCTGTAGAAACAACCGATCTATATGGTGTAGTAGCTTCCCTGTACCTGG
CCACTTGTGCGGCAGTACCCAATCTTGGGCTTCGTGTGTTCTGTTCTTGT
TGACCTTTGGATCCGGCATAGACACAAACGCTGCAGACGAATCTGCATGT
GTCTGCAAGAAAAACAAAAAAGGAAGCAGCGACGGTACTTCGCAAGTAAT
TCCTTTCATCGGCGCGTCGTCGTGCAATGGTTGCAGTGGGTAAATCCCAC
TGCGCACCCTGTTTGACCCTTGGAACCCCCATGTGTGAACACCGTAGGTG
ACATGACATAAGGTAACATACCACACCCTTTTGGACCATTTTCAAAGCTC
GAATGCTCCACAGCAGAAAGAGCGGCGGTGCCGCAAAACTCTGCGTTAGA
GCCGTCAAGAGCTTTCCGACGAAGTATCGATCGTTTGATTGGGACATACA
TCCTCTTCGCCGTGGAGCATTCGAACTAGCTTCGAAAACCGGTCAAAAAA
AAAGGGGGGGGAGTGTGACATATTACGTCATGTCACCCACTGCTGCATGA
TCGGTTGAGCCGGACGAAAATTATCCCCTCGCCGGCGTAGGTTGGAGCCT
TGAGTCTCCGTGCACAAACACGATCAATTGGAACGATCCGTAAACAGGTA
CAATCACTACTTGGCCGTGGACATGATGGCGAGCAGCGAGGACGAGCATA
GGGCCTGGGTCGGCTGGGTCGAATCACGCCTACGAAAGGTGACAAAGCAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11379:542..4191-

>mRNA_E-fasciculatus_F_contig11379.1103.1 ID=mRNA_E-fasciculatus_F_contig11379.1103.1|Name=mRNA_E-fasciculatus_F_contig11379.1103.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=426bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11379:542..4191- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACCTCGGAGTTCTCCAGGGGTCTCGAGATGACCTCGGAGTTCTCCAG
GGGTCTCGAGGTTGTAAACGGCATCATGAAAGAGAAGGGCTCTCTCTCGG
CGTTCTCGAAGCTTTTTGAGCCCTCGGATTTCTTCCTCAGGTTGTAAACG
GCATCATGAAAGAGAAGGGCTCTCTCTCGGCGTTCTCGAAGCTTTTTGAG
CCCTCGGATTTCTTCCTCAGGTACAATCACTACTTGGCCGTGGACATGAT
GGCGAGCAGCGAGGACGAGCATAGGGCCTGGGTCGGCTGGGTCGAATCAC
GCCTACGAAAGGTGACAAAGCAAGTACAATCACTACTTGGCCGTGGACAT
GATGGCGAGCAGCGAGGACGAGCATAGGGCCTGGGTCGGCTGGGTCGAAT
CACGCCTACGAAAGGTGACAAAGCAA
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