prot_E-fasciculatus_F_contig11371.1100.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11371.1100.1
Unique Nameprot_E-fasciculatus_F_contig11371.1100.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length411
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11371.1100.1 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI)

HSP 1 Score: 593 bits (1528), Expect = 1.180e-207
Identity = 349/414 (84.30%), Postives = 357/414 (86.23%), Query Frame = 0 
Query:    1 RSTGSTRARGREGETLMLRERVAILAATLLLLKCHSMSGGATAGALPDQQXXXXHVPHHGGSTPQRAQDFGSQYPQTGRFEARHKRGLVLDDEPAGEEWEEADRECWSATIAAIVASGSTLALQRTPRPDEQQSASSAEEYGRQXXXXXXXXXXXXXYHRKDRDNSSTPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRRHLTQLTAQLSELTGEGFRRAERLLSTANASGNVGIRIAGCAELLRRRARELLLLGLRKKQKNLDGLGGEGKLGKGEEAEAERRKMRELRLVTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPA---QAAGAPKAEVSSAFVGGRVEGSADDPAAVGDDSVKAKPPQFACVKASAILSVPPEVVYLLFADNSRV 411
            R T  T ARGRE E LMLRERVAILAATLLLLKCHSMSGGAT GALPDQQ    HVPH+G  TP RAQDFGS+YPQTGRFEA HKRGLVLDDEPAGEEWE ADRECW ATIAAIVASGSTLALQRT +PDEQQSAS AE YGRQ      XXXXXXX         S PRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIR+HLTQLTAQLSELTGEGFRRAERLLS A ASGNVGIRIAGCAELLRRR REL LLGLRKKQ N DGLGGEGKLGKG+E EAERRKMREL+L+TDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEA        QAAG PKAE SSAFVGGRVEGSADD   VGDDS K+KPPQFACVKASAILSVPPEVVYLLFADNSRV
Sbjct:   18 RDTQGTWARGREAENLMLRERVAILAATLLLLKCHSMSGGAT-GALPDQQQHRRHVPHYG-CTPPRAQDFGSRYPQTGRFEAWHKRGLVLDDEPAGEEWEGADRECWGATIAAIVASGSTLALQRTLKPDEQQSAS-AEGYGRQPRHYRRXXXXXXXXXXXXXXXXSAPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRQHLTQLTAQLSELTGEGFRRAERLLSAAKASGNVGIRIAGCAELLRRRGRELFLLGLRKKQ-NPDGLGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAXXXXXXXXQAAGVPKAEASSAFVGGRVEGSADDSVPVGDDSGKSKPPQFACVKASAILSVPPEVVYLLFADNSRV 427
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BLAST of mRNA_E-fasciculatus_F_contig11371.1100.1 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE)

HSP 1 Score: 572 bits (1474), Expect = 9.060e-199
Identity = 335/398 (84.17%), Postives = 353/398 (88.69%), Query Frame = 0 
Query:   17 MLRERVAILAATLLLLKCHSMSGGATAGALPDQQXXXXHVPHHGGSTPQRAQDFGSQYPQTGRFEARHKRGLVLDDEPAGEEWEEADRECWSATIAAIVASGSTLALQRTPRPDEQQSASSAEEYGRQXXXXXXXXXXXXXYHRKDRDNSSTPRFRRMRAELSANLDAWRMRRRRARETTPAAAIVIRRHLTQLTAQLSELTGEGFRRAERLLSTANASGNVGIRIAGCAELLRRRARELLLLGLRKKQKNLDGLGGEGKLGKGEEAEAERRKMRELRLVTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPA---QAAGAPKAEVSSAFVGGRVEGSADDPAAVGDDSVKAKPPQFACVKASAILSVPPEVVYLLFADNSRV 411
            MLRERVAILAATLLLL+CHSMSGGAT GA+PDQQ    HVPH+G  TPQRAQDFGS+YPQTGRFEA+HKRGLV+DD+PAGEEWEEAD ECWSAT+AAIVASGSTLALQRT +PDEQQSAS AE YGRQ     XXXXXXXX       NSS PRFRR+RAELSANLDAWRMRRRRARET PAAAIVIR+HLT LTAQLSELTGEGFRRAERLLS ANASGNVGIRIAGCAELLRRR REL LLGLRK+Q N DG GG+ KLG G+E EAERRKMREL+L+TDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPA   QAAG PKAE  SA VGGRVEGSADDPA VG+DS K +PPQFACVKASAILSVPPEVVYLLFADNSRV
Sbjct:    1 MLRERVAILAATLLLLECHSMSGGAT-GAIPDQQQHRRHVPHYG-CTPQRAQDFGSRYPQTGRFEAQHKRGLVVDDQPAGEEWEEADLECWSATMAAIVASGSTLALQRTLKPDEQQSAS-AEGYGRQQRHIRXXXXXXXXXXXXXXXNSSAPRFRRIRAELSANLDAWRMRRRRARETIPAAAIVIRQHLTHLTAQLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFLLGLRKRQ-NPDGSGGD-KLGMGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAAHAQAAGVPKAEAYSASVGGRVEGSADDPAPVGEDSGKFRPPQFACVKASAILSVPPEVVYLLFADNSRV 393
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11371.1100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLJ0_ECTSI1.180e-20784.30START domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5J623_9PHAE9.060e-19984.17START domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 175..195
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 22..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..411
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11371contigE-fasciculatus_F_contig11371:2..1234 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11371.1100.1mRNA_E-fasciculatus_F_contig11371.1100.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11371 2..1234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11371.1100.1 ID=prot_E-fasciculatus_F_contig11371.1100.1|Name=mRNA_E-fasciculatus_F_contig11371.1100.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=411bp
RSTGSTRARGREGETLMLRERVAILAATLLLLKCHSMSGGATAGALPDQQ
QRRRHVPHHGGSTPQRAQDFGSQYPQTGRFEARHKRGLVLDDEPAGEEWE
EADRECWSATIAAIVASGSTLALQRTPRPDEQQSASSAEEYGRQQRHNRR
RRRRRHRYHRKDRDNSSTPRFRRMRAELSANLDAWRMRRRRARETTPAAA
IVIRRHLTQLTAQLSELTGEGFRRAERLLSTANASGNVGIRIAGCAELLR
RRARELLLLGLRKKQKNLDGLGGEGKLGKGEEAEAERRKMRELRLVTDKI
VQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAQAAGAP
KAEVSSAFVGGRVEGSADDPAAVGDDSVKAKPPQFACVKASAILSVPPEV
VYLLFADNSRV
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