prot_E-fasciculatus_F_contig11360.1092.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11360.1092.1
Unique Nameprot_E-fasciculatus_F_contig11360.1092.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length401
Homology
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BLAST of mRNA_E-fasciculatus_F_contig11360.1092.1 vs. uniprot
Match: D7G4L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L4_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 1.780e-36
Identity = 86/139 (61.87%), Postives = 93/139 (66.91%), Query Frame = 0 
Query:    1 SLEAVGVSPAQHHAXXXXXASLLGHHXXGIGADVGVVG---------------------GGQGGPVGCGGSLRSVKRRSGEEGAGLPQATGGNKRRARASARCQHPGCTTARTFGREGDRQASFCAVHKEEGMINIKGR 118
            SLEAVGVSPAQHHA     AS       G   +  + G                     GGQGG VGCGG LRSVKRR+G+ GAG+ QA G NKRRARASARCQ+PGC TARTFGR+GDRQASFCAVHKEEGMINIKGR
Sbjct:  304 SLEAVGVSPAQHHAAAAGGASSPAEGARG--EEYALAGRGAXXXXXXXXXXXXXXXXXXGGQGGAVGCGGPLRSVKRRAGDGGAGISQAAGSNKRRARASARCQYPGCMTARTFGRQGDRQASFCAVHKEEGMINIKGR 440
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BLAST of mRNA_E-fasciculatus_F_contig11360.1092.1 vs. uniprot
Match: A0A6H5KKE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE2_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 8.090e-11
Identity = 50/85 (58.82%), Postives = 52/85 (61.18%), Query Frame = 0 
Query:    1 SLEAVGVSPAQHHAXXXXXAS-------------------LLGHHXXGIGADVGVV--GGGQGGPVGCGGSLRSVKRRSGEEGAG 64
            SLEAVGVSPAQHHA     AS                   LLGHH   IGADVGVV  G GQG PVGCGG LRSVKRR+GE G+G
Sbjct:  349 SLEAVGVSPAQHHAAAAAGASSPAEWARGEESALAGRGAGLLGHHGGVIGADVGVVVGGQGQGDPVGCGGPLRSVKRRAGEGGSG 433
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11360.1092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4L4_ECTSI1.780e-3661.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKE2_9PHAE8.090e-1158.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 274..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11360contigE-fasciculatus_F_contig11360:3..4471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11360.1092.1mRNA_E-fasciculatus_F_contig11360.1092.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11360 3..4471 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11360.1092.1 ID=prot_E-fasciculatus_F_contig11360.1092.1|Name=mRNA_E-fasciculatus_F_contig11360.1092.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=401bp
SLEAVGVSPAQHHAAGGGGASLLGHHGGGIGADVGVVGGGQGGPVGCGGS
LRSVKRRSGEEGAGLPQATGGNKRRARASARCQHPGCTTARTFGREGDRQ
ASFCAVHKEEGMINIKGRRCHSPGCQHRPGFAMPGEKRGKFCASHRQPGM
IDVVSRKCQVESGDCDRQPVYGWPGERATRCGTHKLERTLTTLATGAAVV
EKMYDVRGKRCQAEGCIRQPGFGHPLKDKGSVRCHEHKLPGMTNVRRRRA
LERQALQQDPAANYQPPNHSQAEILHHQQQQQQQQQQHQQQKQEQQAGDP
STHSQPDGDEQKPLAGCHAGGYAEQQTCAVVEDSSAMAATASAAAVFAVG
GHPTPHPSSLGGNVVKSIPVSILPRPAAAIAPLGTPAAASVQVGGYAAFP
P
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