mRNA_E-fasciculatus_F_contig1136.1091.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1136.1091.1 vs. uniprot
Match: D7G269_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G269_ECTSI) HSP 1 Score: 399 bits (1026), Expect = 2.070e-136 Identity = 221/350 (63.14%), Postives = 256/350 (73.14%), Query Frame = 1
Query: 1 MWPDFRLALEEVKRKLLETVDTAEGTPSGALARTPA-NTMNQITSLKVKTSSSNFATPADWIASLPRTWGPEVVNTLEVPSFFRTVDGVHTWCDSCFTNANVDFAGAAGKSVLSLKRTTRRLSARIYCNGFNALVHHDCAQFVKGLRTNSSIGDNYKCFDKENEDTSWLSGTRLPRTSADRFVEEQLRASLVEQGATANGANPVYVRMSTQECQQSASRVDCRNQRRACRFNVEDGCAPGTTPDSDYPYHRLPREDLLEHVTLVVRKRKLPEALDEAHSSPLRALARRLDKLEAMPASSFFLELAAITDSWQSMSWANKVVPDIRAKATVVKGKLTAAEGNLLNESLGGL 1047
MW DFRLAL E KLLETVDTAEGTPSGALART +T+ IT LKVK SSS FATPADW ASLP T G EV+ TLE ANVDFAGA KSVLSLK+ TRRL+AR++CNG+NA VHHDCAQFV+GLRT +S+GD YK FDK++ED SWLS RLPRTSAD FV++QLRASL+ QGAT + A+PV+VR ST C QS SRVD N+RRA R +ED A TT D ++ YHRLP L+VRKRK EAL+EAHS LR LARR+D+++ MPASSFFLELA ITDSW+ M WA VVP IR KATVVK K+ AA+G++L+ESLGGL
Sbjct: 1 MWSDFRLALGEFNGKLLETVDTAEGTPSGALARTSREDTIKAITQLKVKVSSSQFATPADWAASLPGTLGSEVLKTLE---------------------ANVDFAGAGEKSVLSLKQPTRRLAARVFCNGWNAWVHHDCAQFVQGLRT-TSMGDTYKSFDKQDEDNSWLSRARLPRTSADTFVDKQLRASLIGQGATTDVAHPVHVRKSTSGCLQSVSRVDVSNRRRAARLALEDERAARTTTDGEHHYHRLP--------VLIVRKRKPAEALEEAHSFILRVLARRVDQVDGMPASSFFLELATITDSWERMPWAQNVVPKIRKKATVVKDKMAAAQGDILSESLGGL 320 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1136.1091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1136.1091.1 >prot_E-fasciculatus_F_contig1136.1091.1 ID=prot_E-fasciculatus_F_contig1136.1091.1|Name=mRNA_E-fasciculatus_F_contig1136.1091.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=349bp MWPDFRLALEEVKRKLLETVDTAEGTPSGALARTPANTMNQITSLKVKTSback to top mRNA from alignment at E-fasciculatus_F_contig1136:10266..18910- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1136.1091.1 ID=mRNA_E-fasciculatus_F_contig1136.1091.1|Name=mRNA_E-fasciculatus_F_contig1136.1091.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8645bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1136:10266..18910- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1136:10266..18910- >mRNA_E-fasciculatus_F_contig1136.1091.1 ID=mRNA_E-fasciculatus_F_contig1136.1091.1|Name=mRNA_E-fasciculatus_F_contig1136.1091.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2094bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1136:10266..18910- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |